RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 LONP1P36776 959 aaKnown RBP13.88□□□□□ -0.19
RARA-208ENST00000577646 TECP42680 631 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 NASPP49321 788 aaPredicted RBP13.88□□□□□ -0.19
RARA-208ENST00000577646 ADAM17P78536 824 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 FAAP100Q0VG06 881 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 PPFIA1Q13136 1202 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 PTK7Q13308 1070 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 BFSP2Q13515 415 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 NCAPH2Q6IBW4 605 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 TAF2Q6P1X5 1199 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 RPAINQ86UA6 219 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 CKAP2LQ8IYA6 745 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 CAGE1Q8TC20 777 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 EIF2AK1Q9BQI3 630 aaKnown RBP13.88□□□□□ -0.19
RARA-208ENST00000577646 JPH2Q9BR39 696 aaPredicted RBP13.88□□□□□ -0.19
RARA-208ENST00000577646 TRPC6Q9Y210 931 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 NOD1Q9Y239 953 aa13.88□□□□□ -0.19
RARA-208ENST00000577646 DOCK5Q9H7D0 1870 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 A0A1W2PPC1 479 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 MBLAC1A4D2B0 266 aaPredicted RBP13.87□□□□□ -0.19
RARA-208ENST00000577646 EML1O00423 815 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 PITPNM1O00562 1244 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 PQBP1O60828 265 aaKnown RBP13.87□□□□□ -0.19
RARA-208ENST00000577646 SLITRK3O94933 977 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 OATP04181 439 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 INSRRP14616 1297 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 CDC42EP1Q00587 391 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 RBL2Q08999 1139 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 NBR1Q14596 966 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 PTGISQ16647 500 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 SERINC5Q86VE9 423 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 TRIM50Q86XT4 487 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 NME8Q8N427 588 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 GJA10Q969M2 543 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 NACC1Q96RE7 527 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 UIMC1Q96RL1 719 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 LBHD1Q9BQE6 289 aaPredicted RBP13.87□□□□□ -0.19
RARA-208ENST00000577646 ANKEF1Q9NU02 776 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 TMEM39AQ9NV64 488 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 TELO2Q9Y4R8 837 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 SRPRBQ9Y5M8 271 aaKnown RBP13.87□□□□□ -0.19
RARA-208ENST00000577646 COL6A3P12111 3177 aa13.87□□□□□ -0.19
RARA-208ENST00000577646 ZNF862O60290 1169 aa13.86□□□□□ -0.19
RARA-208ENST00000577646 B4GALT4O60513 344 aa13.86□□□□□ -0.19
RARA-208ENST00000577646 PPP6R2O75170 966 aa13.86□□□□□ -0.19
RARA-208ENST00000577646 ATP4AP20648 1035 aa13.86□□□□□ -0.19
RARA-208ENST00000577646 PTPAQ15257 358 aa13.86□□□□□ -0.19
RARA-208ENST00000577646 GRIK4Q16099 956 aa13.86□□□□□ -0.19
RARA-208ENST00000577646 KRT79Q5XKE5 535 aa13.86□□□□□ -0.19
RARA-208ENST00000577646 GDF6Q6KF10 455 aaPredicted RBP13.86□□□□□ -0.19
RARA-208ENST00000577646 RSPH3Q86UC2 560 aa13.86□□□□□ -0.19
RARA-208ENST00000577646 KCNG4Q8TDN1 519 aa13.86□□□□□ -0.19
RARA-208ENST00000577646 NT5C3AQ9H0P0 336 aa13.86□□□□□ -0.19
RARA-208ENST00000577646 TBX21Q9UL17 535 aa13.86□□□□□ -0.19
RARA-208ENST00000577646 PCDHA2Q9Y5H9 948 aa13.86□□□□□ -0.19
RARA-208ENST00000577646 SMIM35A0A1B0GVV1 85 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 GAS2O43903 313 aaKnown RBP13.85□□□□□ -0.19
RARA-208ENST00000577646 TIMP1P01033 207 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 MARK3P27448 753 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 TMOD1P28289 359 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 BMP8BP34820 402 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 MAGEA10P43363 369 aaPredicted RBP13.85□□□□□ -0.19
RARA-208ENST00000577646 CHMP4BP1P59074 171 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 PRKCEQ02156 737 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 STK38Q15208 465 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 TPH2Q8IWU9 490 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 ZNF579Q8NAF0 562 aaKnown RBP13.85□□□□□ -0.19
RARA-208ENST00000577646 RETREG2Q8NC44 543 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 LINC00301Q8NCQ3 95 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 LMBR1Q8WVP7 490 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 DYDC2Q96IM9 177 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 USP28Q96RU2 1077 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 LXNQ9BS40 222 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 UBE2OQ9C0C9 1292 aaKnown RBP13.85□□□□□ -0.19
RARA-208ENST00000577646 SCAND2PQ9GZW5 306 aaPredicted RBP13.85□□□□□ -0.19
RARA-208ENST00000577646 TRPV6Q9H1D0 765 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 PRO3102Q9H379 93 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 PDLIM7Q9NR12 457 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 SETD4Q9NVD3 440 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 TUBE1Q9UJT0 475 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 DBR1Q9UK59 544 aaKnown RBP13.85□□□□□ -0.19
RARA-208ENST00000577646 RCOR1Q9UKL0 485 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 ZDHHC9Q9Y397 364 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 RBM19Q9Y4C8 960 aaKnown RBP13.85□□□□□ -0.19
RARA-208ENST00000577646 CLIC4Q9Y696 253 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 MYH9P35579 1960 aaKnown RBP13.85□□□□□ -0.19
RARA-208ENST00000577646 KDM3AQ9Y4C1 1321 aa13.85□□□□□ -0.19
RARA-208ENST00000577646 LAMA3Q16787 3333 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 VWA3AA6NCI4 1184 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 POTEMA6NI47 508 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 DDX11L8A8MPP1 907 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 SPTLC2O15270 562 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 STBD1O95210 358 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 SPATA31C1P0DKV0 1188 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 RAG1P15918 1043 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 YWHABP31946 246 aaKnown RBP13.84□□□□□ -0.19
RARA-208ENST00000577646 RFC2P35250 354 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 RFC5P40937 340 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 UBA7P41226 1012 aa13.84□□□□□ -0.19
RARA-208ENST00000577646 DNM2P50570 870 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms