RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 PHOX2BQ99453 314 aa15.32■□□□□ 0.04
COPS3-214ENST00000577246 PSTPIP2Q9H939 334 aa15.32■□□□□ 0.04
COPS3-214ENST00000577246 JPH1Q9HDC5 661 aaPredicted RBP15.32■□□□□ 0.04
COPS3-214ENST00000577246 TLR9Q9NR96 1032 aa15.32■□□□□ 0.04
COPS3-214ENST00000577246 PCDHB7Q9Y5E2 793 aa15.32■□□□□ 0.04
COPS3-214ENST00000577246 PCDHA2Q9Y5H9 948 aa15.32■□□□□ 0.04
COPS3-214ENST00000577246 SPDYE3A6NKU9 549 aa15.31■□□□□ 0.04
COPS3-214ENST00000577246 GFRA3O60609 400 aa15.31■□□□□ 0.04
COPS3-214ENST00000577246 ATP9AO75110 1047 aa15.31■□□□□ 0.04
COPS3-214ENST00000577246 DDAH1O94760 285 aa15.31■□□□□ 0.04
COPS3-214ENST00000577246 GLP2RO95838 553 aa15.31■□□□□ 0.04
COPS3-214ENST00000577246 SARSP49591 514 aaKnown RBP15.31■□□□□ 0.04
COPS3-214ENST00000577246 CELF4Q9BZC1 486 aaKnown RBP15.31■□□□□ 0.04
COPS3-214ENST00000577246 KDM3AQ9Y4C1 1321 aa15.31■□□□□ 0.04
COPS3-214ENST00000577246 SMIM35A0A1B0GVV1 85 aa15.3■□□□□ 0.04
COPS3-214ENST00000577246 PPFIA3O75145 1194 aa15.3■□□□□ 0.04
COPS3-214ENST00000577246 CYP21A2P08686 494 aa15.3■□□□□ 0.04
COPS3-214ENST00000577246 ITGB5P18084 799 aa15.3■□□□□ 0.04
COPS3-214ENST00000577246 SLC26A2P50443 739 aa15.3■□□□□ 0.04
COPS3-214ENST00000577246 FOXK2Q01167 660 aa15.3■□□□□ 0.04
COPS3-214ENST00000577246 KRT76Q01546 638 aa15.3■□□□□ 0.04
COPS3-214ENST00000577246 PTPN21Q16825 1174 aa15.3■□□□□ 0.04
COPS3-214ENST00000577246 ZBTB33Q86T24 672 aa15.3■□□□□ 0.04
COPS3-214ENST00000577246 RTN4RL1Q86UN2 441 aaPredicted RBP15.3■□□□□ 0.04
COPS3-214ENST00000577246 SUSD6Q92537 303 aa15.3■□□□□ 0.04
COPS3-214ENST00000577246 SDF4Q9BRK5 362 aa15.3■□□□□ 0.04
COPS3-214ENST00000577246 JADE2Q9NQC1 790 aa15.3■□□□□ 0.04
COPS3-214ENST00000577246 C1orf112Q9NSG2 853 aa15.3■□□□□ 0.04
COPS3-214ENST00000577246 SLC9A2Q9UBY0 812 aa15.3■□□□□ 0.04
COPS3-214ENST00000577246 UBIAD1Q9Y5Z9 338 aa15.3■□□□□ 0.04
COPS3-214ENST00000577246 TTC3P53804 2025 aa15.29■□□□□ 0.04
COPS3-214ENST00000577246 DENND3A2RUS2 1198 aa15.29■□□□□ 0.04
COPS3-214ENST00000577246 NFX1Q12986 1120 aaKnown RBP15.29■□□□□ 0.04
COPS3-214ENST00000577246 PLPPR4Q7Z2D5 763 aa15.29■□□□□ 0.04
COPS3-214ENST00000577246 THNSL1Q8IYQ7 743 aa15.29■□□□□ 0.04
COPS3-214ENST00000577246 ATP8B4Q8TF62 1192 aa15.29■□□□□ 0.04
COPS3-214ENST00000577246 ATOH1Q92858 354 aaPredicted RBP15.29■□□□□ 0.04
COPS3-214ENST00000577246 SENP2Q9HC62 589 aa15.29■□□□□ 0.04
COPS3-214ENST00000577246 PKD2L1Q9P0L9 805 aa15.29■□□□□ 0.04
COPS3-214ENST00000577246 PUF60Q9UHX1 559 aaKnown RBP15.29■□□□□ 0.04
COPS3-214ENST00000577246 TECTAO75443 2155 aa15.29■□□□□ 0.04
COPS3-214ENST00000577246 ATG2AQ2TAZ0 1938 aa15.28■□□□□ 0.04
COPS3-214ENST00000577246 E7EWF7 191 aa15.28■□□□□ 0.04
COPS3-214ENST00000577246 FGF18O76093 207 aa15.28■□□□□ 0.04
COPS3-214ENST00000577246 AVPR2P30518 371 aa15.28■□□□□ 0.04
COPS3-214ENST00000577246 TMEM62Q0P6H9 643 aa15.28■□□□□ 0.04
COPS3-214ENST00000577246 DUSP6Q16828 381 aa15.28■□□□□ 0.04
COPS3-214ENST00000577246 CASC1Q6TDU7 716 aa15.28■□□□□ 0.04
COPS3-214ENST00000577246 TEX2Q8IWB9 1127 aa15.28■□□□□ 0.04
COPS3-214ENST00000577246 ZNF654Q8IZM8 581 aa15.28■□□□□ 0.04
COPS3-214ENST00000577246 TMTC2Q8N394 836 aa15.28■□□□□ 0.04
COPS3-214ENST00000577246 ASIC4Q96FT7 647 aa15.28■□□□□ 0.04
COPS3-214ENST00000577246 MTA3Q9BTC8 594 aa15.28■□□□□ 0.04
COPS3-214ENST00000577246 LZTS1Q9Y250 596 aa15.28■□□□□ 0.04
COPS3-214ENST00000577246 NR2E1Q9Y466 385 aa15.28■□□□□ 0.04
COPS3-214ENST00000577246 C5orf42Q9H799 3197 aa15.27■□□□□ 0.04
COPS3-214ENST00000577246 NFASCO94856 1347 aa15.27■□□□□ 0.04
COPS3-214ENST00000577246 TBKBP1A7MCY6 615 aa15.27■□□□□ 0.04
COPS3-214ENST00000577246 PER2O15055 1255 aa15.27■□□□□ 0.04
COPS3-214ENST00000577246 GPR182O15218 404 aa15.27■□□□□ 0.04
COPS3-214ENST00000577246 RPS6KA5O75582 802 aa15.27■□□□□ 0.04
COPS3-214ENST00000577246 CALM1P0DP23 149 aa15.27■□□□□ 0.04
COPS3-214ENST00000577246 CALM2P0DP24 149 aa15.27■□□□□ 0.04
COPS3-214ENST00000577246 CALM3P0DP25 149 aa15.27■□□□□ 0.04
COPS3-214ENST00000577246 HOXB8P17481 243 aaPredicted RBP15.27■□□□□ 0.04
COPS3-214ENST00000577246 LAG3P18627 525 aa15.27■□□□□ 0.04
COPS3-214ENST00000577246 STAT5BP51692 787 aa15.27■□□□□ 0.04
COPS3-214ENST00000577246 PLCB4Q15147 1175 aa15.27■□□□□ 0.04
COPS3-214ENST00000577246 TMEM184AQ6ZMB5 413 aa15.27■□□□□ 0.04
COPS3-214ENST00000577246 SLC24A5Q71RS6 500 aa15.27■□□□□ 0.04
COPS3-214ENST00000577246 RASGRP4Q8TDF6 673 aa15.27■□□□□ 0.04
COPS3-214ENST00000577246 IGDCC4Q8TDY8 1250 aa15.27■□□□□ 0.04
COPS3-214ENST00000577246 TMEM260Q9NX78 707 aa15.27■□□□□ 0.04
COPS3-214ENST00000577246 MYO7AQ13402 2215 aa15.27■□□□□ 0.03
COPS3-214ENST00000577246 IBSPP21815 317 aaPredicted RBP15.26■□□□□ 0.03
COPS3-214ENST00000577246 GATMP50440 423 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 VCPP55072 806 aaKnown RBP15.26■□□□□ 0.03
COPS3-214ENST00000577246 ACTR2P61160 394 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 MTHFD1LQ6UB35 978 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 NFXL1Q6ZNB6 911 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 UBALD2Q8IYN6 164 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 COLGALT1Q8NBJ5 622 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 ZBTB10Q96DT7 871 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 PCYT2Q99447 389 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 ADAM2Q99965 735 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 IL25Q9H293 177 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 TMX1Q9H3N1 280 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 ATP6V0A4Q9HBG4 840 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 NGRNQ9NPE2 291 aaKnown RBP15.26■□□□□ 0.03
COPS3-214ENST00000577246 ENTPD7Q9NQZ7 604 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 RGS18Q9NS28 235 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 KCNH7Q9NS40 1196 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 PCDHA6Q9UN73 950 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 GINS2Q9Y248 185 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 PCDHGC5Q9Y5F6 944 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 PCDHA8Q9Y5H6 950 aa15.26■□□□□ 0.03
COPS3-214ENST00000577246 CCDC69A6NI79 296 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 FSCN2O14926 492 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 HOXA2O43364 376 aa15.25■□□□□ 0.03
COPS3-214ENST00000577246 PPM1AP35813 382 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms