RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 F13A1P00488 732 aa16.23■□□□□ 0.19
ABR-223ENST00000573895 ATP2A2P16615 1042 aaKnown RBP16.23■□□□□ 0.19
ABR-223ENST00000573895 U2AF2P26368 475 aaKnown RBP eCLIP16.23■□□□□ 0.19
ABR-223ENST00000573895 PKP1Q13835 747 aa16.23■□□□□ 0.19
ABR-223ENST00000573895 MBTPS1Q14703 1052 aa16.23■□□□□ 0.19
ABR-223ENST00000573895 FAM26DQ5JW98 314 aa16.23■□□□□ 0.19
ABR-223ENST00000573895 FAM160B1Q5W0V3 765 aa16.23■□□□□ 0.19
ABR-223ENST00000573895 MCTP1Q6DN14 999 aa16.23■□□□□ 0.19
ABR-223ENST00000573895 MIS18BP1Q6P0N0 1132 aa16.23■□□□□ 0.19
ABR-223ENST00000573895 BRAPQ7Z569 592 aa16.23■□□□□ 0.19
ABR-223ENST00000573895 GUCD1Q96NT3 240 aa16.23■□□□□ 0.19
ABR-223ENST00000573895 RIT2Q99578 217 aa16.23■□□□□ 0.19
ABR-223ENST00000573895 GJB4Q9NTQ9 266 aa16.23■□□□□ 0.19
ABR-223ENST00000573895 TCEAL9Q9UHQ7 104 aa16.23■□□□□ 0.19
ABR-223ENST00000573895 TUBE1Q9UJT0 475 aa16.23■□□□□ 0.19
ABR-223ENST00000573895 KCNJ14Q9UNX9 436 aa16.23■□□□□ 0.19
ABR-223ENST00000573895 PTPRSQ13332 1948 aa16.23■□□□□ 0.19
ABR-223ENST00000573895 INSRRP14616 1297 aa16.22■□□□□ 0.19
ABR-223ENST00000573895 MARK3P27448 753 aa16.22■□□□□ 0.19
ABR-223ENST00000573895 KRT2P35908 639 aa16.22■□□□□ 0.19
ABR-223ENST00000573895 PLCB4Q15147 1175 aa16.22■□□□□ 0.19
ABR-223ENST00000573895 NONOQ15233 471 aaKnown RBP eCLIP16.22■□□□□ 0.19
ABR-223ENST00000573895 MARCH8Q5T0T0 291 aa16.22■□□□□ 0.19
ABR-223ENST00000573895 RSPH3Q86UC2 560 aa16.22■□□□□ 0.19
ABR-223ENST00000573895 MBOAT7Q96N66 472 aa16.22■□□□□ 0.19
ABR-223ENST00000573895 ZNF576Q9H609 170 aa16.22■□□□□ 0.19
ABR-223ENST00000573895 PCDHA11Q9Y5I1 949 aa16.22■□□□□ 0.19
ABR-223ENST00000573895 PCDHA10Q9Y5I2 948 aa16.22■□□□□ 0.19
ABR-223ENST00000573895 EVPLQ92817 2033 aa16.21■□□□□ 0.19
ABR-223ENST00000573895 POTEB3A0JP26 581 aa16.21■□□□□ 0.19
ABR-223ENST00000573895 DDX39AO00148 427 aaKnown RBP16.21■□□□□ 0.19
ABR-223ENST00000573895 MSH4O15457 936 aa16.21■□□□□ 0.19
ABR-223ENST00000573895 HBP1O60381 514 aa16.21■□□□□ 0.19
ABR-223ENST00000573895 PBX2P40425 430 aa16.21■□□□□ 0.19
ABR-223ENST00000573895 KCNJ6P48051 423 aa16.21■□□□□ 0.19
ABR-223ENST00000573895 FOSBP53539 338 aa16.21■□□□□ 0.19
ABR-223ENST00000573895 GNL2Q13823 731 aaKnown RBP16.21■□□□□ 0.19
ABR-223ENST00000573895 IKBKEQ14164 716 aa16.21■□□□□ 0.19
ABR-223ENST00000573895 PLEKHG4Q58EX7 1191 aa16.21■□□□□ 0.19
ABR-223ENST00000573895 ATL3Q6DD88 541 aa16.21■□□□□ 0.19
ABR-223ENST00000573895 POTEBQ6S5H4 581 aa16.21■□□□□ 0.19
ABR-223ENST00000573895 CLEC17AQ6ZS10 378 aa16.21■□□□□ 0.19
ABR-223ENST00000573895 DIS3L2Q8IYB7 885 aaKnown RBP16.21■□□□□ 0.19
ABR-223ENST00000573895 SLC5A5Q92911 643 aa16.21■□□□□ 0.19
ABR-223ENST00000573895 ZNF302Q9NR11 478 aa16.21■□□□□ 0.19
ABR-223ENST00000573895 MAFBQ9Y5Q3 323 aaPredicted RBP16.21■□□□□ 0.19
ABR-223ENST00000573895 SIP14410 1827 aa16.2■□□□□ 0.18
ABR-223ENST00000573895 LOXHD1Q8IVV2 1947 aa16.2■□□□□ 0.18
ABR-223ENST00000573895 CCDC194A0A1B0GVG4 234 aa16.2■□□□□ 0.18
ABR-223ENST00000573895 WDR64B1ANS9 1081 aa16.2■□□□□ 0.18
ABR-223ENST00000573895 BTBD18B2RXH4 712 aa16.2■□□□□ 0.18
ABR-223ENST00000573895 BACH1O14867 736 aa16.2■□□□□ 0.18
ABR-223ENST00000573895 PSAPP07602 524 aa16.2■□□□□ 0.18
ABR-223ENST00000573895 SFNP31947 248 aa16.2■□□□□ 0.18
ABR-223ENST00000573895 RESTQ13127 1097 aa16.2■□□□□ 0.18
ABR-223ENST00000573895 PPP4R3AQ6IN85 833 aa16.2■□□□□ 0.18
ABR-223ENST00000573895 CCDC60Q8IWA6 550 aaPredicted RBP16.2■□□□□ 0.18
ABR-223ENST00000573895 ATP8B4Q8TF62 1192 aa16.2■□□□□ 0.18
ABR-223ENST00000573895 FAM161BQ96MY7 647 aa16.2■□□□□ 0.18
ABR-223ENST00000573895 CDX2Q99626 313 aaPredicted RBP16.2■□□□□ 0.18
ABR-223ENST00000573895 NAP1L4Q99733 375 aaKnown RBP16.2■□□□□ 0.18
ABR-223ENST00000573895 SLC28A3Q9HAS3 691 aa16.2■□□□□ 0.18
ABR-223ENST00000573895 TRPC6Q9Y210 931 aa16.2■□□□□ 0.18
ABR-223ENST00000573895 PCDHA2Q9Y5H9 948 aa16.2■□□□□ 0.18
ABR-223ENST00000573895 COL1A2P08123 1366 aa16.2■□□□□ 0.18
ABR-223ENST00000573895 KIF28PB7ZC32 967 aa16.19■□□□□ 0.18
ABR-223ENST00000573895 GCFC2P16383 781 aaKnown RBP16.19■□□□□ 0.18
ABR-223ENST00000573895 WDR5P61964 334 aaKnown RBP16.19■□□□□ 0.18
ABR-223ENST00000573895 MKRN4PQ13434 485 aaPredicted RBP16.19■□□□□ 0.18
ABR-223ENST00000573895 ZNF484Q5JVG2 852 aa16.19■□□□□ 0.18
ABR-223ENST00000573895 FOXD4L5Q5VV16 416 aaPredicted RBP16.19■□□□□ 0.18
ABR-223ENST00000573895 SWSAP1Q6NVH7 229 aa16.19■□□□□ 0.18
ABR-223ENST00000573895 PDXDC2PQ6P474 469 aa16.19■□□□□ 0.18
ABR-223ENST00000573895 RUFY4Q6ZNE9 571 aa16.19■□□□□ 0.18
ABR-223ENST00000573895 FAM43BQ6ZT52 329 aaPredicted RBP16.19■□□□□ 0.18
ABR-223ENST00000573895 FERMT3Q86UX7 667 aa16.19■□□□□ 0.18
ABR-223ENST00000573895 NOSTRINQ8IVI9 506 aa16.19■□□□□ 0.18
ABR-223ENST00000573895 HERC6Q8IVU3 1022 aa16.19■□□□□ 0.18
ABR-223ENST00000573895 NME8Q8N427 588 aa16.19■□□□□ 0.18
ABR-223ENST00000573895 RDM1Q8NG50 284 aa16.19■□□□□ 0.18
ABR-223ENST00000573895 FOXD4L4Q8WXT5 416 aaPredicted RBP16.19■□□□□ 0.18
ABR-223ENST00000573895 BBXQ8WY36 941 aaPredicted RBP16.19■□□□□ 0.18
ABR-223ENST00000573895 APBB2Q92870 758 aa16.19■□□□□ 0.18
ABR-223ENST00000573895 TEKT3Q9BXF9 490 aa16.19■□□□□ 0.18
ABR-223ENST00000573895 SQORQ9Y6N5 450 aa16.19■□□□□ 0.18
ABR-223ENST00000573895 A0A0C4DFX4 3053 aa16.19■□□□□ 0.18
ABR-223ENST00000573895 SMIM35A0A1B0GVV1 85 aa16.18■□□□□ 0.18
ABR-223ENST00000573895 GAS7O60861 476 aa16.18■□□□□ 0.18
ABR-223ENST00000573895 PSMD10O75832 226 aa16.18■□□□□ 0.18
ABR-223ENST00000573895 CHRNA1P02708 482 aa16.18■□□□□ 0.18
ABR-223ENST00000573895 JAK3P52333 1124 aa16.18■□□□□ 0.18
ABR-223ENST00000573895 MGAT3Q09327 533 aa16.18■□□□□ 0.18
ABR-223ENST00000573895 INF2Q27J81 1249 aa16.18■□□□□ 0.18
ABR-223ENST00000573895 LRCH2Q5VUJ6 765 aa16.18■□□□□ 0.18
ABR-223ENST00000573895 IER5Q5VY09 327 aa16.18■□□□□ 0.18
ABR-223ENST00000573895 NEK8Q86SG6 692 aa16.18■□□□□ 0.18
ABR-223ENST00000573895 DBF4BQ8NFT6 615 aa16.18■□□□□ 0.18
ABR-223ENST00000573895 SEPT8Q92599 483 aa16.18■□□□□ 0.18
ABR-223ENST00000573895 ZNF396Q96N95 335 aaPredicted RBP16.18■□□□□ 0.18
ABR-223ENST00000573895 DISC1Q9NRI5 854 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms