RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 UIMC1Q96RL1 719 aa10.3□□□□□ -0.76
NDE1-207ENST00000573203 CDX2Q99626 313 aaPredicted RBP10.3□□□□□ -0.76
NDE1-207ENST00000573203 ZNF577Q9BSK1 485 aa10.3□□□□□ -0.76
NDE1-207ENST00000573203 TCEAL9Q9UHQ7 104 aa10.3□□□□□ -0.76
NDE1-207ENST00000573203 PCDHA4Q9UN74 947 aa10.3□□□□□ -0.76
NDE1-207ENST00000573203 COL6A3P12111 3177 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 MYH9P35579 1960 aaKnown RBP10.29□□□□□ -0.76
NDE1-207ENST00000573203 IGLV3-22A0A075B6J6 115 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 K7ELQ4 463 aaPredicted RBP10.29□□□□□ -0.76
NDE1-207ENST00000573203 IPO5O00410 1097 aaKnown RBP10.29□□□□□ -0.76
NDE1-207ENST00000573203 BACH1O14867 736 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 CAND2O75155 1236 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 BAIAP3O94812 1187 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 CXCL10P02778 98 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 CTSHP09668 335 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 XBP1P17861 261 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 CIITAP33076 1130 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 DDIT3P35638 169 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 STAT5BP51692 787 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 RABGGTBP53611 331 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 ADAM17P78536 824 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 GPNMBQ14956 572 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 GRIK4Q16099 956 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 PRR16Q569H4 304 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 GALNT17Q6IS24 598 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 TRAF7Q6Q0C0 670 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 NECAB1Q8N987 351 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 TNPO1Q92973 898 aaKnown RBP10.29□□□□□ -0.76
NDE1-207ENST00000573203 AIFM3Q96NN9 605 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 SLC9A7Q96T83 725 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 PCYT2Q99447 389 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 NKX2-4Q9H2Z4 354 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 ZNF576Q9H609 170 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 TBC1D22BQ9NU19 505 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 ORC3Q9UBD5 711 aaPredicted RBP10.29□□□□□ -0.76
NDE1-207ENST00000573203 STK36Q9NRP7 1315 aa10.29□□□□□ -0.76
NDE1-207ENST00000573203 RRN3P2A6NIE6 340 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 DHX15O43143 795 aaKnown RBP10.28□□□□□ -0.76
NDE1-207ENST00000573203 ATG7O95352 703 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 CCNE2O96020 404 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 USP11P51784 963 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 IGBP1P78318 339 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 IKBKEQ14164 716 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 FAM160B1Q5W0V3 765 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 MIS18BP1Q6P0N0 1132 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 TAF2Q6P1X5 1199 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 ABHD15Q6UXT9 468 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 PLPPR4Q7Z2D5 763 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 RSPH3Q86UC2 560 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 DAGLBQ8NCG7 672 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 PHOSPHO2Q8TCD6 241 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 TBCKQ8TEA7 893 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 MYLIPQ8WY64 445 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 WASF1Q92558 559 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 KRTAP3-3Q9BYR6 98 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 KRTAP3-2Q9BYR7 98 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 SLC28A3Q9HAS3 691 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 CHMP5Q9NZZ3 219 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 TUBE1Q9UJT0 475 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 KCNJ14Q9UNX9 436 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 LHX6Q9UPM6 363 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 YBX2Q9Y2T7 364 aaKnown RBP10.28□□□□□ -0.76
NDE1-207ENST00000573203 PCDHA11Q9Y5I1 949 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 PTPRSQ13332 1948 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 MYO9BQ13459 2157 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 CHD9Q3L8U1 2897 aa10.28□□□□□ -0.76
NDE1-207ENST00000573203 WDR81Q562E7 1941 aa10.27□□□□□ -0.76
NDE1-207ENST00000573203 ABHD14A-ACY1A0A1B0GW23 586 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 KIF28PB7ZC32 967 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 M0R2N6 131 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 DTNBO60941 627 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 EFCAB14O75071 495 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 LARGE1O95461 756 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 CTDNEP1O95476 244 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 INSRRP14616 1297 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 MYOGP15173 224 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 SLC26A2P50443 739 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 WDR5P61964 334 aaKnown RBP10.27□□□□□ -0.77
NDE1-207ENST00000573203 KRT76Q01546 638 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 CAMK2BQ13554 666 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 MBTPS1Q14703 1052 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 GRIN2CQ14957 1233 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 PLCB4Q15147 1175 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 NONOQ15233 471 aaKnown RBP eCLIP10.27□□□□□ -0.77
NDE1-207ENST00000573203 ME3Q16798 604 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 PPP2R2DQ66LE6 453 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 ZNF746Q6NUN9 644 aaPredicted RBP10.27□□□□□ -0.77
NDE1-207ENST00000573203 PDXDC2PQ6P474 469 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 RUFY4Q6ZNE9 571 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 KRT25Q7Z3Z0 450 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 HERC6Q8IVU3 1022 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 CCDC60Q8IWA6 550 aaPredicted RBP10.27□□□□□ -0.77
NDE1-207ENST00000573203 CKAP2LQ8IYA6 745 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 GTF3C6Q969F1 213 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 PHF20Q9BVI0 1012 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 ZNF302Q9NR11 478 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 SAMM50Q9Y512 469 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 MICAL3Q7RTP6 2002 aa10.27□□□□□ -0.77
NDE1-207ENST00000573203 IGKV6D-21A0A0A0MT36 114 aa10.26□□□□□ -0.77
NDE1-207ENST00000573203 CCDC194A0A1B0GVG4 234 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms