RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 RUFY4Q6ZNE9 571 aa13.39□□□□□ -0.27
NDE1-206ENST00000572967 MYOCDQ8IZQ8 938 aa13.39□□□□□ -0.27
NDE1-206ENST00000572967 GDPD5Q8WTR4 605 aa13.39□□□□□ -0.27
NDE1-206ENST00000572967 ZNF396Q96N95 335 aaPredicted RBP13.39□□□□□ -0.27
NDE1-206ENST00000572967 ZBED2Q9BTP6 218 aa13.39□□□□□ -0.27
NDE1-206ENST00000572967 OSBPL7Q9BZF2 842 aa13.39□□□□□ -0.27
NDE1-206ENST00000572967 JPH1Q9HDC5 661 aaPredicted RBP13.39□□□□□ -0.27
NDE1-206ENST00000572967 ABHD14A-ACY1A0A1B0GW23 586 aa13.38□□□□□ -0.27
NDE1-206ENST00000572967 GSTTP1A0A1W2PQM5 241 aa13.38□□□□□ -0.27
NDE1-206ENST00000572967 BTBD18B2RXH4 712 aa13.38□□□□□ -0.27
NDE1-206ENST00000572967 DDX39AO00148 427 aaKnown RBP13.38□□□□□ -0.27
NDE1-206ENST00000572967 GNAT1P11488 350 aa13.38□□□□□ -0.27
NDE1-206ENST00000572967 GCFC2P16383 781 aaKnown RBP13.38□□□□□ -0.27
NDE1-206ENST00000572967 IKBKEQ14164 716 aa13.38□□□□□ -0.27
NDE1-206ENST00000572967 GRIK4Q16099 956 aa13.38□□□□□ -0.27
NDE1-206ENST00000572967 JAKMIP3Q5VZ66 844 aa13.38□□□□□ -0.27
NDE1-206ENST00000572967 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.38□□□□□ -0.27
NDE1-206ENST00000572967 DBF4BQ8NFT6 615 aa13.38□□□□□ -0.27
NDE1-206ENST00000572967 CYP2W1Q8TAV3 490 aa13.38□□□□□ -0.27
NDE1-206ENST00000572967 GLG1Q92896 1179 aa13.38□□□□□ -0.27
NDE1-206ENST00000572967 MXRA8Q9BRK3 442 aa13.38□□□□□ -0.27
NDE1-206ENST00000572967 KCNH7Q9NS40 1196 aa13.38□□□□□ -0.27
NDE1-206ENST00000572967 THEGQ9P2T0 379 aa13.38□□□□□ -0.27
NDE1-206ENST00000572967 SLC9A2Q9UBY0 812 aa13.38□□□□□ -0.27
NDE1-206ENST00000572967 MTUS1Q9ULD2 1270 aa13.38□□□□□ -0.27
NDE1-206ENST00000572967 CEP131Q9UPN4 1083 aa13.38□□□□□ -0.27
NDE1-206ENST00000572967 ADAMTS3O15072 1205 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 DTNBO60941 627 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 CAND2O75155 1236 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 GJB5O95377 273 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 ARP10275 920 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 SREBF1P36956 1147 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 CLK2P49760 499 aaKnown RBP13.37□□□□□ -0.27
NDE1-206ENST00000572967 IGBP1P78318 339 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 RESTQ13127 1097 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 NPY5RQ15761 445 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 CSPP1Q1MSJ5 1256 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 PIK3AP1Q6ZUJ8 805 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 NEK8Q86SG6 692 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 FERMT3Q86UX7 667 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 SEPT1Q8WYJ6 367 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 ZBTB10Q96DT7 871 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 UIMC1Q96RL1 719 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 SDF4Q9BRK5 362 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 GJB4Q9NTQ9 266 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 ERAP1Q9NZ08 941 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 TUBE1Q9UJT0 475 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 CFAP45Q9UL16 551 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 TRPC6Q9Y210 931 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 MYH9P35579 1960 aaKnown RBP13.37□□□□□ -0.27
NDE1-206ENST00000572967 COL4A6Q14031 1691 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 NRCAMQ92823 1304 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 UNC80Q8N2C7 3258 aa13.37□□□□□ -0.27
NDE1-206ENST00000572967 M0R2N6 131 aa13.36□□□□□ -0.27
NDE1-206ENST00000572967 GTPBP6O43824 516 aaPredicted RBP13.36□□□□□ -0.27
NDE1-206ENST00000572967 EFCAB14O75071 495 aa13.36□□□□□ -0.27
NDE1-206ENST00000572967 AMHP03971 560 aa13.36□□□□□ -0.27
NDE1-206ENST00000572967 GHRP10912 638 aa13.36□□□□□ -0.27
NDE1-206ENST00000572967 USP11P51784 963 aa13.36□□□□□ -0.27
NDE1-206ENST00000572967 ADAM17P78536 824 aa13.36□□□□□ -0.27
NDE1-206ENST00000572967 NR5A1Q13285 461 aa13.36□□□□□ -0.27
NDE1-206ENST00000572967 ITGB3BPQ13352 177 aaPredicted RBP13.36□□□□□ -0.27
NDE1-206ENST00000572967 SKIV2LQ15477 1246 aaKnown RBP13.36□□□□□ -0.27
NDE1-206ENST00000572967 CEP55Q53EZ4 464 aa13.36□□□□□ -0.27
NDE1-206ENST00000572967 PLEKHG4Q58EX7 1191 aa13.36□□□□□ -0.27
NDE1-206ENST00000572967 MOXD1Q6UVY6 613 aa13.36□□□□□ -0.27
NDE1-206ENST00000572967 RASGRP4Q8TDF6 673 aa13.36□□□□□ -0.27
NDE1-206ENST00000572967 TNFRSF25Q93038 417 aa13.36□□□□□ -0.27
NDE1-206ENST00000572967 GBP4Q96PP9 640 aa13.36□□□□□ -0.27
NDE1-206ENST00000572967 PCYT2Q99447 389 aa13.36□□□□□ -0.27
NDE1-206ENST00000572967 AGO4Q9HCK5 861 aaKnown RBP13.36□□□□□ -0.27
NDE1-206ENST00000572967 TCF20Q9UGU0 1960 aaKnown RBP13.35□□□□□ -0.27
NDE1-206ENST00000572967 LINC01553A4QN01 128 aa13.35□□□□□ -0.27
NDE1-206ENST00000572967 ZNF76P36508 570 aa13.35□□□□□ -0.27
NDE1-206ENST00000572967 ACTR2P61160 394 aa13.35□□□□□ -0.27
NDE1-206ENST00000572967 KRT85P78386 507 aa13.35□□□□□ -0.27
NDE1-206ENST00000572967 SETQ01105 290 aaPredicted RBP13.35□□□□□ -0.27
NDE1-206ENST00000572967 GRB10Q13322 594 aa13.35□□□□□ -0.27
NDE1-206ENST00000572967 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
NDE1-206ENST00000572967 OXER1Q8TDS5 423 aa13.35□□□□□ -0.27
NDE1-206ENST00000572967 TRAPPC12Q8WVT3 735 aa13.35□□□□□ -0.27
NDE1-206ENST00000572967 SEPT8Q92599 483 aa13.35□□□□□ -0.27
NDE1-206ENST00000572967 IFIH1Q9BYX4 1025 aaKnown RBP13.35□□□□□ -0.27
NDE1-206ENST00000572967 FAM49AQ9H0Q0 323 aaPredicted RBP13.35□□□□□ -0.27
NDE1-206ENST00000572967 SMARCAD1Q9H4L7 1026 aa13.35□□□□□ -0.27
NDE1-206ENST00000572967 AZI2Q9H6S1 392 aa13.35□□□□□ -0.27
NDE1-206ENST00000572967 NFASCO94856 1347 aa13.35□□□□□ -0.27
NDE1-206ENST00000572967 PRRC2BQ5JSZ5 2229 aaKnown RBP13.34□□□□□ -0.27
NDE1-206ENST00000572967 FAM86B1E9PN63 330 aa13.34□□□□□ -0.27
NDE1-206ENST00000572967 GOLGA6L22H0YM25 854 aa13.34□□□□□ -0.27
NDE1-206ENST00000572967 FAM86B2P0C5J1 330 aa13.34□□□□□ -0.27
NDE1-206ENST00000572967 PKP1Q13835 747 aa13.34□□□□□ -0.27
NDE1-206ENST00000572967 INF2Q27J81 1249 aa13.34□□□□□ -0.27
NDE1-206ENST00000572967 TJAP1Q5JTD0 557 aa13.34□□□□□ -0.27
NDE1-206ENST00000572967 TTC38Q5R3I4 469 aa13.34□□□□□ -0.27
NDE1-206ENST00000572967 FOXD4L5Q5VV16 416 aaPredicted RBP13.34□□□□□ -0.27
NDE1-206ENST00000572967 TAF2Q6P1X5 1199 aa13.34□□□□□ -0.27
NDE1-206ENST00000572967 PLA2G4DQ86XP0 818 aa13.34□□□□□ -0.27
NDE1-206ENST00000572967 TBCKQ8TEA7 893 aa13.34□□□□□ -0.27
NDE1-206ENST00000572967 DNAJB3Q8WWF6 145 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms