RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 ZC3H11AO75152 810 aaKnown RBP eCLIP7.03□□□□□ -1.28
KARS-211ENST00000569298 FBXO21O94952 628 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 CASP14P31944 242 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 SKIV2L2P42285 1042 aaKnown RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 PIK3CAP42336 1068 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 ADARP55265 1226 aaKnown RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 LACTBP83111 547 aaPredicted RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 CKAP4Q07065 602 aaKnown RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 TRAP1Q12931 704 aaKnown RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 CBLBQ13191 982 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 E2F2Q14209 437 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 PPP1R7Q15435 360 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 NFE2L2Q16236 605 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 ME3Q16798 604 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 C15orf59Q2T9L4 293 aaPredicted RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 RABL6Q3YEC7 729 aaPredicted RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 CFAP58Q5T655 872 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 TMEM154Q6P9G4 183 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 MCF2L2Q86YR7 1114 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 ANKMY2Q8IV38 441 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.03□□□□□ -1.28
KARS-211ENST00000569298 CHCHD4Q8N4Q1 142 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 DCLK2Q8N568 766 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 ANKS4BQ8N8V4 417 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 EIF1ADQ8N9N8 165 aaKnown RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 MLKLQ8NB16 471 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 GOLM1Q8NBJ4 401 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 AENQ8WTP8 325 aaKnown RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.03□□□□□ -1.28
KARS-211ENST00000569298 CCDC12Q8WUD4 166 aaPredicted RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 ANKRD49Q8WVL7 239 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 ATL1Q8WXF7 558 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 IRF7Q92985 503 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 CAVIN3Q969G5 261 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 FAM136AQ96C01 138 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 ZNF594Q96JF6 807 aaPredicted RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 WDR24Q96S15 920 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 SLF1Q9BQI6 1058 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 UQCC2Q9BRT2 126 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 CENPKQ9BS16 269 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 CDCA7Q9BWT1 371 aaPredicted RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 UNKQ9C0B0 810 aaKnown RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 LRRC27Q9C0I9 530 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 DNAJC25Q9H1X3 360 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 TPK1Q9H3S4 243 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 OSBPL3Q9H4L5 887 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 PIDD1Q9HB75 910 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 ANO2Q9NQ90 1003 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 SH2B1Q9NRF2 756 aaPredicted RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 DACT1Q9NYF0 836 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 MAP3K20Q9NYL2 800 aaKnown RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 BTBD7Q9P203 1132 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 CHIC2Q9UKJ5 165 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 GIT1Q9Y2X7 761 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 MRPL11Q9Y3B7 192 aaKnown RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 FANCAO15360 1455 aa7.03□□□□□ -1.28
KARS-211ENST00000569298 COL17A1Q9UMD9 1497 aaPredicted RBP7.03□□□□□ -1.28
KARS-211ENST00000569298 MROH7Q68CQ1 1323 aa7.02□□□□□ -1.28
KARS-211ENST00000569298 UGGT2Q9NYU1 1516 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 SENP3-EIF4A1A0A087X0R7 540 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 ST20-MTHFSA0A0A6YYL1 179 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 CENPBD1B2RD01 187 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 ERVV-2B6SEH9 535 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 KIF28PB7ZC32 967 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 AKR1B15C9JRZ8 316 aaPredicted RBP7.02□□□□□ -1.29
KARS-211ENST00000569298 M0QX08 132 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 NVLO15381 856 aaKnown RBP7.02□□□□□ -1.29
KARS-211ENST00000569298 TRAPPC3O43617 180 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 HSF2BPO75031 334 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 STAMBPO95630 424 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 ASMTLO95671 621 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 APOEP02649 317 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 LDHBP07195 334 aaKnown RBP7.02□□□□□ -1.29
KARS-211ENST00000569298 NQO1P15559 274 aaKnown RBP7.02□□□□□ -1.29
KARS-211ENST00000569298 EIF2S2P20042 333 aaKnown RBP7.02□□□□□ -1.29
KARS-211ENST00000569298 PSMA3P25788 255 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 NFKBIAP25963 317 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 SERPINB6P35237 376 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 PCK1P35558 622 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 MXI1P50539 228 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 KIF11P52732 1056 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 GJA9P57773 515 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 PLCB3Q01970 1234 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 RASGRF1Q13972 1273 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 SAFB2Q14151 953 aaKnown RBP eCLIP7.02□□□□□ -1.29
KARS-211ENST00000569298 KIF22Q14807 665 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 EFCAB2Q5VUJ9 269 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 CCDC62Q6P9F0 684 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 DBX2Q6ZNG2 339 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 ARHGEF18Q6ZSZ5 1173 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 BEND5Q7L4P6 421 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 KRT28Q7Z3Y7 464 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 PPP1R42Q7Z4L9 355 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 VPS36Q86VN1 386 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 DDX42Q86XP3 938 aaKnown RBP eCLIP7.02□□□□□ -1.29
KARS-211ENST00000569298 MAP7D3Q8IWC1 876 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 MREGQ8N565 214 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 LINC00469Q8N7U9 141 aa7.02□□□□□ -1.29
KARS-211ENST00000569298 ENDOVQ8N8Q3 282 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms