RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 C8orf34Q49A92 452 aa33.28■■■□□ 2.92
RAB40C-211ENST00000568586 PDXDC2PQ6P474 469 aa33.28■■■□□ 2.92
RAB40C-211ENST00000568586 KRT25Q7Z3Z0 450 aa33.28■■■□□ 2.92
RAB40C-211ENST00000568586 ORC3Q9UBD5 711 aaPredicted RBP33.28■■■□□ 2.92
RAB40C-211ENST00000568586 COL1A2P08123 1366 aa33.27■■■□□ 2.92
RAB40C-211ENST00000568586 RBAK-RBAKDNI3L0D1 243 aa33.27■■■□□ 2.92
RAB40C-211ENST00000568586 TLL1O43897 1013 aa33.27■■■□□ 2.92
RAB40C-211ENST00000568586 TAP1Q03518 808 aa33.27■■■□□ 2.92
RAB40C-211ENST00000568586 ADGRE1Q14246 886 aa33.27■■■□□ 2.92
RAB40C-211ENST00000568586 NONOQ15233 471 aaKnown RBP eCLIP33.27■■■□□ 2.921e-6■■■■□ 24.9
RAB40C-211ENST00000568586 LIN28BQ6ZN17 250 aaKnown RBP eCLIP33.27■■■□□ 2.92
RAB40C-211ENST00000568586 NECAB1Q8N987 351 aa33.27■■■□□ 2.92
RAB40C-211ENST00000568586 WASF1Q92558 559 aa33.27■■■□□ 2.92
RAB40C-211ENST00000568586 GAS2L1Q99501 681 aaPredicted RBP33.27■■■□□ 2.92
RAB40C-211ENST00000568586 RAD9AQ99638 391 aa33.27■■■□□ 2.92
RAB40C-211ENST00000568586 SMIM35A0A1B0GVV1 85 aa33.26■■■□□ 2.91
RAB40C-211ENST00000568586 ZBTB42B2RXF5 422 aa33.26■■■□□ 2.91
RAB40C-211ENST00000568586 ARHGEF15O94989 841 aa33.26■■■□□ 2.91
RAB40C-211ENST00000568586 PSAPP07602 524 aa33.26■■■□□ 2.91
RAB40C-211ENST00000568586 ZNF484Q5JVG2 852 aa33.26■■■□□ 2.91
RAB40C-211ENST00000568586 MTHFD1LQ6UB35 978 aa33.26■■■□□ 2.91
RAB40C-211ENST00000568586 TMCO2Q7Z6W1 182 aaPredicted RBP33.26■■■□□ 2.91
RAB40C-211ENST00000568586 TRAPPC12Q8WVT3 735 aa33.26■■■□□ 2.91
RAB40C-211ENST00000568586 ZBTB10Q96DT7 871 aa33.26■■■□□ 2.91
RAB40C-211ENST00000568586 SQORQ9Y6N5 450 aa33.26■■■□□ 2.91
RAB40C-211ENST00000568586 MICAL3Q7RTP6 2002 aa33.25■■■□□ 2.91
RAB40C-211ENST00000568586 WDR64B1ANS9 1081 aa33.25■■■□□ 2.91
RAB40C-211ENST00000568586 MRPS6P82932 125 aaKnown RBP33.25■■■□□ 2.91
RAB40C-211ENST00000568586 LPIN1Q14693 890 aa33.25■■■□□ 2.91
RAB40C-211ENST00000568586 B3GNT9Q6UX72 402 aa33.25■■■□□ 2.91
RAB40C-211ENST00000568586 NME8Q8N427 588 aa33.25■■■□□ 2.91
RAB40C-211ENST00000568586 IFIH1Q9BYX4 1025 aaKnown RBP33.25■■■□□ 2.91
RAB40C-211ENST00000568586 TCEAL9Q9UHQ7 104 aa33.25■■■□□ 2.91
RAB40C-211ENST00000568586 PSMD10O75832 226 aa33.24■■■□□ 2.91
RAB40C-211ENST00000568586 TDP2O95551 362 aa33.24■■■□□ 2.91
RAB40C-211ENST00000568586 AMHP03971 560 aa33.24■■■□□ 2.91
RAB40C-211ENST00000568586 FBXO47Q5MNV8 452 aa33.24■■■□□ 2.91
RAB40C-211ENST00000568586 IER5Q5VY09 327 aa33.24■■■□□ 2.91
RAB40C-211ENST00000568586 NSUN7Q8NE18 718 aaKnown RBP33.24■■■□□ 2.91
RAB40C-211ENST00000568586 BBXQ8WY36 941 aaPredicted RBP33.24■■■□□ 2.91
RAB40C-211ENST00000568586 ZBED2Q9BTP6 218 aa33.24■■■□□ 2.91
RAB40C-211ENST00000568586 GJB4Q9NTQ9 266 aa33.24■■■□□ 2.91
RAB40C-211ENST00000568586 CDY2AQ9Y6F7 541 aa33.24■■■□□ 2.91
RAB40C-211ENST00000568586 IGSF9BQ9UPX0 1349 aa33.24■■■□□ 2.91
RAB40C-211ENST00000568586 LOC101059915A0A1B0GWI6 518 aaPredicted RBP33.23■■■□□ 2.91
RAB40C-211ENST00000568586 GAS7O60861 476 aa33.23■■■□□ 2.91
RAB40C-211ENST00000568586 ETNPPLQ8TBG4 499 aa33.23■■■□□ 2.91
RAB40C-211ENST00000568586 DISC1Q9NRI5 854 aa33.23■■■□□ 2.91
RAB40C-211ENST00000568586 KDM3AQ9Y4C1 1321 aa33.23■■■□□ 2.91
RAB40C-211ENST00000568586 LCHNA4D1U4 455 aa33.22■■■□□ 2.91
RAB40C-211ENST00000568586 POU3F3P20264 500 aaPredicted RBP33.22■■■□□ 2.91
RAB40C-211ENST00000568586 KLRC1P26715 233 aa33.22■■■□□ 2.91
RAB40C-211ENST00000568586 SFNP31947 248 aa33.22■■■□□ 2.91
RAB40C-211ENST00000568586 HTRA4P83105 476 aaPredicted RBP33.22■■■□□ 2.91
RAB40C-211ENST00000568586 INF2Q27J81 1249 aa33.22■■■□□ 2.91
RAB40C-211ENST00000568586 LRCH2Q5VUJ6 765 aa33.22■■■□□ 2.91
RAB40C-211ENST00000568586 RDM1Q8NG50 284 aa33.22■■■□□ 2.91
RAB40C-211ENST00000568586 TOP1MTQ969P6 601 aa33.22■■■□□ 2.91
RAB40C-211ENST00000568586 KIF2CQ99661 725 aa33.22■■■□□ 2.91
RAB40C-211ENST00000568586 FAM49AQ9H0Q0 323 aaPredicted RBP33.22■■■□□ 2.91
RAB40C-211ENST00000568586 GABBR1Q9UBS5 961 aa33.22■■■□□ 2.91
RAB40C-211ENST00000568586 SIP14410 1827 aa33.21■■■□□ 2.91
RAB40C-211ENST00000568586 DTNBO60941 627 aa33.21■■■□□ 2.91
RAB40C-211ENST00000568586 GHRP10912 638 aa33.21■■■□□ 2.91
RAB40C-211ENST00000568586 PPP4R3AQ6IN85 833 aa33.21■■■□□ 2.91
RAB40C-211ENST00000568586 USP38Q8NB14 1042 aa33.21■■■□□ 2.91
RAB40C-211ENST00000568586 OXER1Q8TDS5 423 aa33.21■■■□□ 2.91
RAB40C-211ENST00000568586 TEKT3Q9BXF9 490 aa33.21■■■□□ 2.91
RAB40C-211ENST00000568586 INSL6Q9Y581 213 aa33.21■■■□□ 2.91
RAB40C-211ENST00000568586 CCDC194A0A1B0GVG4 234 aa33.2■■■□□ 2.91
RAB40C-211ENST00000568586 JAK3P52333 1124 aa33.2■■■□□ 2.91
RAB40C-211ENST00000568586 TSHZ1Q6ZSZ6 1077 aa33.2■■■□□ 2.91
RAB40C-211ENST00000568586 KIAA0319LQ8IZA0 1049 aa33.2■■■□□ 2.91
RAB40C-211ENST00000568586 FAM167AQ96KS9 214 aa33.2■■■□□ 2.91
RAB40C-211ENST00000568586 UNC45AQ9H3U1 944 aa33.2■■■□□ 2.91
RAB40C-211ENST00000568586 ST3GAL1Q11201 340 aa33.19■■■□□ 2.9
RAB40C-211ENST00000568586 FAM43BQ6ZT52 329 aaPredicted RBP33.19■■■□□ 2.9
RAB40C-211ENST00000568586 NEK8Q86SG6 692 aa33.19■■■□□ 2.9
RAB40C-211ENST00000568586 PHF6Q8IWS0 365 aaKnown RBP eCLIP33.19■■■□□ 2.9
RAB40C-211ENST00000568586 MYOCDQ8IZQ8 938 aa33.19■■■□□ 2.9
RAB40C-211ENST00000568586 SP7Q8TDD2 431 aaPredicted RBP33.19■■■□□ 2.9
RAB40C-211ENST00000568586 TNFRSF25Q93038 417 aa33.19■■■□□ 2.9
RAB40C-211ENST00000568586 GJA10Q969M2 543 aa33.19■■■□□ 2.9
RAB40C-211ENST00000568586 CELF4Q9BZC1 486 aaKnown RBP33.19■■■□□ 2.9
RAB40C-211ENST00000568586 AGO3Q9H9G7 860 aaKnown RBP33.19■■■□□ 2.9
RAB40C-211ENST00000568586 DDX25Q9UHL0 483 aaKnown RBP33.19■■■□□ 2.9
RAB40C-211ENST00000568586 LIMCH1Q9UPQ0 1083 aa33.19■■■□□ 2.9
RAB40C-211ENST00000568586 SAMM50Q9Y512 469 aa33.19■■■□□ 2.9
RAB40C-211ENST00000568586 TRPV2Q9Y5S1 764 aa33.19■■■□□ 2.9
RAB40C-211ENST00000568586 MYH9P35579 1960 aaKnown RBP33.19■■■□□ 2.9
RAB40C-211ENST00000568586 ZNF862O60290 1169 aa33.18■■■□□ 2.9
RAB40C-211ENST00000568586 C22orf31O95567 290 aa33.18■■■□□ 2.9
RAB40C-211ENST00000568586 GCFC2P16383 781 aaKnown RBP33.18■■■□□ 2.9
RAB40C-211ENST00000568586 KCNMB3Q9NPA1 279 aa33.18■■■□□ 2.9
RAB40C-211ENST00000568586 CEP131Q9UPN4 1083 aa33.18■■■□□ 2.9
RAB40C-211ENST00000568586 EPOPA6NHQ4 379 aa33.17■■■□□ 2.9
RAB40C-211ENST00000568586 CKAP2LQ8IYA6 745 aa33.17■■■□□ 2.9
RAB40C-211ENST00000568586 CUL9Q8IWT3 2517 aa33.16■■■□□ 2.9
RAB40C-211ENST00000568586 SLC37A4O43826 429 aa33.16■■■□□ 2.9
RAB40C-211ENST00000568586 ERVK-21P61565 698 aa33.16■■■□□ 2.9
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