RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 RPAINQ86UA6 219 aa15.14■□□□□ 0.01
CLK3-218ENST00000566926 SLC5A5Q92911 643 aa15.14■□□□□ 0.01
CLK3-218ENST00000566926 MBOAT7Q96N66 472 aa15.14■□□□□ 0.01
CLK3-218ENST00000566926 GJB4Q9NTQ9 266 aa15.14■□□□□ 0.01
CLK3-218ENST00000566926 DDX25Q9UHL0 483 aaKnown RBP15.14■□□□□ 0.01
CLK3-218ENST00000566926 TUBE1Q9UJT0 475 aa15.14■□□□□ 0.01
CLK3-218ENST00000566926 SLC4A7Q9Y6M7 1214 aa15.14■□□□□ 0.01
CLK3-218ENST00000566926 LAMA3Q16787 3333 aa15.14■□□□□ 0.01
CLK3-218ENST00000566926 MICAL3Q7RTP6 2002 aa15.14■□□□□ 0.01
CLK3-218ENST00000566926 TMEM265A0A087WTH1 108 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 EDIL3O43854 480 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 EFCAB14O75071 495 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 TDP2O95551 362 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 CXCL10P02778 98 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 INSRRP14616 1297 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 PLCB4Q15147 1175 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 CSPP1Q1MSJ5 1256 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 ZNF697Q5TEC3 545 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 KRT40Q6A162 431 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 SWSAP1Q6NVH7 229 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 CNKSR3Q6P9H4 555 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 CKAP2LQ8IYA6 745 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 DEFB123Q8N688 67 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 RDM1Q8NG50 284 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 ATP8B4Q8TF62 1192 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 DISC1Q9NRI5 854 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 ZDHHC9Q9Y397 364 aa15.13■□□□□ 0.01
CLK3-218ENST00000566926 COL1A2P08123 1366 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 MBLAC1A4D2B0 266 aaPredicted RBP15.12■□□□□ 0.01
CLK3-218ENST00000566926 TBX3O15119 743 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 MARCH6O60337 910 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 CCNT1O60563 726 aaKnown RBP15.12■□□□□ 0.01
CLK3-218ENST00000566926 DTNBO60941 627 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 IGBP1P78318 339 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 RAB30Q15771 203 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 ZNF484Q5JVG2 852 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 ATL3Q6DD88 541 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 BRAPQ7Z569 592 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 CCDC60Q8IWA6 550 aaPredicted RBP15.12■□□□□ 0.01
CLK3-218ENST00000566926 DIS3L2Q8IYB7 885 aaKnown RBP15.12■□□□□ 0.01
CLK3-218ENST00000566926 PHOSPHO2Q8TCD6 241 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 OXER1Q8TDS5 423 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 BBXQ8WY36 941 aaPredicted RBP15.12■□□□□ 0.01
CLK3-218ENST00000566926 WNT8BQ93098 351 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 FAM167AQ96KS9 214 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 FAM20AQ96MK3 541 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 UIMC1Q96RL1 719 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 SLC9A7Q96T83 725 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 MSRAQ9UJ68 235 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 CEP131Q9UPN4 1083 aa15.12■□□□□ 0.01
CLK3-218ENST00000566926 MAFBQ9Y5Q3 323 aaPredicted RBP15.12■□□□□ 0.01
CLK3-218ENST00000566926 ABHD14A-ACY1A0A1B0GW23 586 aa15.11■□□□□ 0.01
CLK3-218ENST00000566926 NBNO60934 754 aa15.11■□□□□ 0.01
CLK3-218ENST00000566926 PSMD10O75832 226 aa15.11■□□□□ 0.01
CLK3-218ENST00000566926 BAG4O95429 457 aaKnown RBP15.11■□□□□ 0.01
CLK3-218ENST00000566926 KCNJ6P48051 423 aa15.11■□□□□ 0.01
CLK3-218ENST00000566926 NR5A1Q13285 461 aa15.11■□□□□ 0.01
CLK3-218ENST00000566926 IKBKEQ14164 716 aa15.11■□□□□ 0.01
CLK3-218ENST00000566926 FAM26DQ5JW98 314 aa15.11■□□□□ 0.01
CLK3-218ENST00000566926 TRAF7Q6Q0C0 670 aa15.11■□□□□ 0.01
CLK3-218ENST00000566926 MIER3Q7Z3K6 550 aa15.11■□□□□ 0.01
CLK3-218ENST00000566926 ETNPPLQ8TBG4 499 aa15.11■□□□□ 0.01
CLK3-218ENST00000566926 VWCEQ96DN2 955 aa15.11■□□□□ 0.01
CLK3-218ENST00000566926 NRBP2Q9NSY0 501 aa15.11■□□□□ 0.01
CLK3-218ENST00000566926 CXXC1Q9P0U4 656 aaPredicted RBP15.11■□□□□ 0.01
CLK3-218ENST00000566926 GABBR1Q9UBS5 961 aa15.11■□□□□ 0.01
CLK3-218ENST00000566926 PCDHA2Q9Y5H9 948 aa15.11■□□□□ 0.01
CLK3-218ENST00000566926 BTBD18B2RXH4 712 aa15.1■□□□□ 0.01
CLK3-218ENST00000566926 M0QZ92 97 aa15.1■□□□□ 0.01
CLK3-218ENST00000566926 ATP2A2P16615 1042 aaKnown RBP15.1■□□□□ 0.01
CLK3-218ENST00000566926 DNAJB2P25686 324 aa15.1■□□□□ 0.01
CLK3-218ENST00000566926 MARCH8Q5T0T0 291 aa15.1■□□□□ 0.01
CLK3-218ENST00000566926 IER5Q5VY09 327 aa15.1■□□□□ 0.01
CLK3-218ENST00000566926 SLFN12Q8IYM2 578 aa15.1■□□□□ 0.01
CLK3-218ENST00000566926 NME8Q8N427 588 aa15.1■□□□□ 0.01
CLK3-218ENST00000566926 SEPT8Q92599 483 aa15.1■□□□□ 0.01
CLK3-218ENST00000566926 TNFRSF25Q93038 417 aa15.1■□□□□ 0.01
CLK3-218ENST00000566926 UNC45AQ9H3U1 944 aa15.1■□□□□ 0.01
CLK3-218ENST00000566926 SIP14410 1827 aa15.09■□□□□ 0.01
CLK3-218ENST00000566926 SMIM35A0A1B0GVV1 85 aa15.09■□□□□ 0.01
CLK3-218ENST00000566926 KIF28PB7ZC32 967 aa15.09■□□□□ 0.01
CLK3-218ENST00000566926 CHMP2AO43633 222 aa15.09■□□□□ 0.01
CLK3-218ENST00000566926 SLC37A4O43826 429 aa15.09■□□□□ 0.01
CLK3-218ENST00000566926 DKC1O60832 514 aaKnown RBP eCLIP15.09■□□□□ 0.01
CLK3-218ENST00000566926 CTSHP09668 335 aa15.09■□□□□ 0.01
CLK3-218ENST00000566926 FOSBP53539 338 aa15.09■□□□□ 0.01
CLK3-218ENST00000566926 GNL2Q13823 731 aaKnown RBP15.09■□□□□ 0.01
CLK3-218ENST00000566926 GPNMBQ14956 572 aa15.09■□□□□ 0.01
CLK3-218ENST00000566926 NFKBIBQ15653 356 aa15.09■□□□□ 0.01
CLK3-218ENST00000566926 MTHFD1LQ6UB35 978 aa15.09■□□□□ 0.01
CLK3-218ENST00000566926 DNAJB3Q8WWF6 145 aa15.09■□□□□ 0.01
CLK3-218ENST00000566926 APBB2Q92870 758 aa15.09■□□□□ 0.01
CLK3-218ENST00000566926 TIFAQ96CG3 184 aa15.09■□□□□ 0.01
CLK3-218ENST00000566926 FOXP1Q9H334 677 aaPredicted RBP15.09■□□□□ 0.01
CLK3-218ENST00000566926 KCNMB3Q9NPA1 279 aa15.09■□□□□ 0.01
CLK3-218ENST00000566926 MTMR10Q9NXD2 777 aa15.09■□□□□ 0.01
CLK3-218ENST00000566926 IGSF9BQ9UPX0 1349 aa15.09■□□□□ 0.01
CLK3-218ENST00000566926 PTPRSQ13332 1948 aa15.09■□□□□ 0.01
CLK3-218ENST00000566926 LAMA2P24043 3122 aaKnown RBP15.09■□□□□ 0.01
CLK3-218ENST00000566926 SZT2Q5T011 3432 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms