RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 BMT2Q1RMZ1 405 aa27.89■■■□□ 2.06
LINC01003-201ENST00000564834 EDRF1Q3B7T1 1238 aa27.89■■■□□ 2.06
LINC01003-201ENST00000564834 DNTTIP2Q5QJE6 756 aaKnown RBP27.89■■■□□ 2.06
LINC01003-201ENST00000564834 MAP1SQ66K74 1059 aaPredicted RBP27.89■■■□□ 2.06
LINC01003-201ENST00000564834 NCAPG2Q86XI2 1143 aa27.89■■■□□ 2.06
LINC01003-201ENST00000564834 CNGA4Q8IV77 575 aa27.89■■■□□ 2.06
LINC01003-201ENST00000564834 C4orf19Q8IY42 314 aa27.89■■■□□ 2.06
LINC01003-201ENST00000564834 SLC10A4Q96EP9 437 aa27.89■■■□□ 2.06
LINC01003-201ENST00000564834 BAG1Q99933 345 aaPredicted RBP27.89■■■□□ 2.06
LINC01003-201ENST00000564834 MOV10L1Q9BXT6 1211 aaKnown RBP27.89■■■□□ 2.06
LINC01003-201ENST00000564834 STX10O60499 249 aa27.88■■■□□ 2.05
LINC01003-201ENST00000564834 MFAP3LO75121 409 aa27.88■■■□□ 2.05
LINC01003-201ENST00000564834 SLC25A27O95847 323 aa27.88■■■□□ 2.05
LINC01003-201ENST00000564834 COPB2P35606 906 aa27.88■■■□□ 2.05
LINC01003-201ENST00000564834 PSMC5P62195 406 aa27.88■■■□□ 2.05
LINC01003-201ENST00000564834 STXBP2Q15833 593 aa27.88■■■□□ 2.05
LINC01003-201ENST00000564834 MIIPQ5JXC2 388 aa27.88■■■□□ 2.05
LINC01003-201ENST00000564834 GPAT2Q6NUI2 795 aa27.88■■■□□ 2.05
LINC01003-201ENST00000564834 TRAF5O00463 557 aa27.88■■■□□ 2.05
LINC01003-201ENST00000564834 ARHGAP6O43182 974 aa27.88■■■□□ 2.05
LINC01003-201ENST00000564834 CNTN2Q02246 1040 aa27.88■■■□□ 2.05
LINC01003-201ENST00000564834 KNOP1Q1ED39 458 aaKnown RBP27.88■■■□□ 2.05
LINC01003-201ENST00000564834 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.88■■■□□ 2.05
LINC01003-201ENST00000564834 ZC3H3Q8IXZ2 948 aaKnown RBP27.88■■■□□ 2.05
LINC01003-201ENST00000564834 SMAP1Q8IYB5 467 aaPredicted RBP27.88■■■□□ 2.05
LINC01003-201ENST00000564834 CCAR2Q8N163 923 aaKnown RBP27.88■■■□□ 2.05
LINC01003-201ENST00000564834 CCDC51Q96ER9 411 aa27.88■■■□□ 2.05
LINC01003-201ENST00000564834 ASTN1O14525 1302 aa27.88■■■□□ 2.05
LINC01003-201ENST00000564834 SPATA31C2B4DYI2 1134 aa27.87■■■□□ 2.05
LINC01003-201ENST00000564834 EIF3DO15371 548 aaKnown RBP eCLIP27.87■■■□□ 2.05
LINC01003-201ENST00000564834 CASP14P31944 242 aa27.87■■■□□ 2.05
LINC01003-201ENST00000564834 ALDH5A1P51649 535 aaPredicted RBP27.87■■■□□ 2.05
LINC01003-201ENST00000564834 MAN2A1Q16706 1144 aa27.87■■■□□ 2.05
LINC01003-201ENST00000564834 E4F1Q66K89 784 aaPredicted RBP27.87■■■□□ 2.05
LINC01003-201ENST00000564834 MYCT1Q8N699 235 aa27.87■■■□□ 2.05
LINC01003-201ENST00000564834 TRAF3IP3Q9Y228 551 aa27.87■■■□□ 2.05
LINC01003-201ENST00000564834 EIF3JO75822 258 aaKnown RBP27.86■■■□□ 2.05
LINC01003-201ENST00000564834 GCNT3O95395 438 aa27.86■■■□□ 2.05
LINC01003-201ENST00000564834 MYBP10242 640 aa27.86■■■□□ 2.05
LINC01003-201ENST00000564834 RARRES1P49788 294 aa27.86■■■□□ 2.05
LINC01003-201ENST00000564834 PADI6Q6TGC4 694 aa27.86■■■□□ 2.05
LINC01003-201ENST00000564834 ZNF408Q9H9D4 720 aa27.86■■■□□ 2.05
LINC01003-201ENST00000564834 PCDHA10Q9Y5I2 948 aa27.86■■■□□ 2.05
LINC01003-201ENST00000564834 POTEB2H3BUK9 544 aa27.86■■■□□ 2.05
LINC01003-201ENST00000564834 GNA14O95837 355 aa27.86■■■□□ 2.05
LINC01003-201ENST00000564834 ERCC3P19447 782 aa27.86■■■□□ 2.05
LINC01003-201ENST00000564834 YWHABP31946 246 aaKnown RBP27.86■■■□□ 2.05
LINC01003-201ENST00000564834 TBC1D8BQ0IIM8 1120 aa27.86■■■□□ 2.05
LINC01003-201ENST00000564834 UGCGQ16739 394 aa27.86■■■□□ 2.05
LINC01003-201ENST00000564834 NAA15Q9BXJ9 866 aaKnown RBP27.86■■■□□ 2.05
LINC01003-201ENST00000564834 JPH1Q9HDC5 661 aaPredicted RBP27.86■■■□□ 2.05
LINC01003-201ENST00000564834 RBPJLQ9UBG7 517 aa27.86■■■□□ 2.05
LINC01003-201ENST00000564834 MYH9P35579 1960 aaKnown RBP27.86■■■□□ 2.05
LINC01003-201ENST00000564834 USP27XA6NNY8 438 aa27.85■■■□□ 2.05
LINC01003-201ENST00000564834 SFI1A8K8P3 1242 aa27.85■■■□□ 2.05
LINC01003-201ENST00000564834 PDXKO00764 312 aa27.85■■■□□ 2.05
LINC01003-201ENST00000564834 ICAM3P32942 547 aa27.85■■■□□ 2.05
LINC01003-201ENST00000564834 FXR1P51114 621 aaKnown RBP eCLIP27.85■■■□□ 2.05
LINC01003-201ENST00000564834 FKBP15Q5T1M5 1219 aa27.85■■■□□ 2.05
LINC01003-201ENST00000564834 CPLX3Q8WVH0 158 aa27.85■■■□□ 2.05
LINC01003-201ENST00000564834 TXNRD2Q9NNW7 524 aa27.85■■■□□ 2.05
LINC01003-201ENST00000564834 LRRC37A2A6NM11 1700 aa27.85■■■□□ 2.05
LINC01003-201ENST00000564834 EDNRBP24530 442 aa27.84■■■□□ 2.05
LINC01003-201ENST00000564834 HOXD13P35453 343 aa27.84■■■□□ 2.05
LINC01003-201ENST00000564834 MARSP56192 900 aaKnown RBP27.84■■■□□ 2.05
LINC01003-201ENST00000564834 FKBP1BP68106 108 aa27.84■■■□□ 2.05
LINC01003-201ENST00000564834 VWA3BQ502W6 1294 aa27.84■■■□□ 2.05
LINC01003-201ENST00000564834 ERGIC2Q96RQ1 377 aa27.84■■■□□ 2.05
LINC01003-201ENST00000564834 POLD4Q9HCU8 107 aa27.84■■■□□ 2.05
LINC01003-201ENST00000564834 UBE4BO95155 1302 aa27.83■■■□□ 2.05
LINC01003-201ENST00000564834 NKRFO15226 690 aaKnown RBP eCLIP27.83■■■□□ 2.05
LINC01003-201ENST00000564834 PRPF6O94906 941 aaKnown RBP27.83■■■□□ 2.05
LINC01003-201ENST00000564834 FAM133AQ8N9E0 248 aa27.83■■■□□ 2.05
LINC01003-201ENST00000564834 FIZ1Q96SL8 496 aa27.83■■■□□ 2.05
LINC01003-201ENST00000564834 NDST4Q9H3R1 872 aa27.83■■■□□ 2.05
LINC01003-201ENST00000564834 BCAS3Q9H6U6 928 aa27.83■■■□□ 2.05
LINC01003-201ENST00000564834 ANKEF1Q9NU02 776 aa27.83■■■□□ 2.05
LINC01003-201ENST00000564834 TYW1Q9NV66 732 aaKnown RBP27.83■■■□□ 2.05
LINC01003-201ENST00000564834 SLC9A2Q9UBY0 812 aa27.83■■■□□ 2.05
LINC01003-201ENST00000564834 PNMA3Q9UL41 463 aa27.83■■■□□ 2.05
LINC01003-201ENST00000564834 ZNFX1Q9P2E3 1918 aaKnown RBP27.83■■■□□ 2.05
LINC01003-201ENST00000564834 CALUO43852 315 aaPredicted RBP27.83■■■□□ 2.05
LINC01003-201ENST00000564834 HIP1RO75146 1068 aa27.83■■■□□ 2.05
LINC01003-201ENST00000564834 MAPK7Q13164 816 aa27.83■■■□□ 2.05
LINC01003-201ENST00000564834 FAM178BQ8IXR5 827 aa27.83■■■□□ 2.05
LINC01003-201ENST00000564834 C16orf45Q96MC5 204 aaPredicted RBP27.83■■■□□ 2.05
LINC01003-201ENST00000564834 CCDC43Q96MW1 224 aaKnown RBP27.83■■■□□ 2.05
LINC01003-201ENST00000564834 ARID2Q68CP9 1835 aa27.82■■■□□ 2.04
LINC01003-201ENST00000564834 CCP110O43303 1012 aa27.82■■■□□ 2.04
LINC01003-201ENST00000564834 DKC1O60832 514 aaKnown RBP eCLIP27.82■■■□□ 2.04
LINC01003-201ENST00000564834 FECHP22830 423 aa27.82■■■□□ 2.04
LINC01003-201ENST00000564834 ADAM9Q13443 819 aa27.82■■■□□ 2.04
LINC01003-201ENST00000564834 ODR4Q5SWX8 454 aa27.82■■■□□ 2.04
LINC01003-201ENST00000564834 STXBP4Q6ZWJ1 553 aa27.82■■■□□ 2.04
LINC01003-201ENST00000564834 RETREG2Q8NC44 543 aa27.82■■■□□ 2.04
LINC01003-201ENST00000564834 GTF3C2Q8WUA4 911 aaPredicted RBP27.82■■■□□ 2.04
LINC01003-201ENST00000564834 NUP58Q9BVL2 599 aa27.82■■■□□ 2.04
LINC01003-201ENST00000564834 TIPINQ9BVW5 301 aa27.82■■■□□ 2.04
LINC01003-201ENST00000564834 TRMT1Q9NXH9 659 aaKnown RBP27.82■■■□□ 2.04
LINC01003-201ENST00000564834 SOWAHBA6NEL2 793 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms