RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 NCAPH2Q6IBW4 605 aa18.73■□□□□ 0.59
RNF40-206ENST00000564260 RSPH3Q86UC2 560 aa18.73■□□□□ 0.59
RNF40-206ENST00000564260 FERMT3Q86UX7 667 aa18.73■□□□□ 0.59
RNF40-206ENST00000564260 CKAP2LQ8IYA6 745 aa18.73■□□□□ 0.59
RNF40-206ENST00000564260 LBHD1Q9BQE6 289 aaPredicted RBP18.73■□□□□ 0.59
RNF40-206ENST00000564260 JPH2Q9BR39 696 aaPredicted RBP18.73■□□□□ 0.59
RNF40-206ENST00000564260 POLR3CQ9BUI4 534 aaPredicted RBP18.73■□□□□ 0.59
RNF40-206ENST00000564260 NOC4LQ9BVI4 516 aaKnown RBP18.73■□□□□ 0.59
RNF40-206ENST00000564260 NIFKQ9BYG3 293 aaKnown RBP18.73■□□□□ 0.59
RNF40-206ENST00000564260 TUFT1Q9NNX1 390 aa18.73■□□□□ 0.59
RNF40-206ENST00000564260 PRDM5Q9NQX1 630 aaPredicted RBP18.73■□□□□ 0.59
RNF40-206ENST00000564260 TUBE1Q9UJT0 475 aa18.73■□□□□ 0.59
RNF40-206ENST00000564260 ATP6V1DQ9Y5K8 247 aa18.73■□□□□ 0.59
RNF40-206ENST00000564260 ALPK3Q96L96 1907 aa18.72■□□□□ 0.59
RNF40-206ENST00000564260 DOCK5Q9H7D0 1870 aa18.72■□□□□ 0.59
RNF40-206ENST00000564260 TRIM43BA6NCK2 446 aa18.72■□□□□ 0.59
RNF40-206ENST00000564260 EML1O00423 815 aa18.72■□□□□ 0.59
RNF40-206ENST00000564260 CHMP4BP1P59074 171 aa18.72■□□□□ 0.59
RNF40-206ENST00000564260 MFSD5Q6N075 450 aa18.72■□□□□ 0.59
RNF40-206ENST00000564260 OTUD6AQ7L8S5 288 aa18.72■□□□□ 0.59
RNF40-206ENST00000564260 TMEM199Q8N511 208 aa18.72■□□□□ 0.59
RNF40-206ENST00000564260 GJA10Q969M2 543 aa18.72■□□□□ 0.59
RNF40-206ENST00000564260 TRIM43Q96BQ3 446 aaPredicted RBP18.72■□□□□ 0.59
RNF40-206ENST00000564260 ZNF396Q96N95 335 aaPredicted RBP18.72■□□□□ 0.59
RNF40-206ENST00000564260 SETD4Q9NVD3 440 aa18.72■□□□□ 0.59
RNF40-206ENST00000564260 PCDHA2Q9Y5H9 948 aa18.72■□□□□ 0.59
RNF40-206ENST00000564260 PDE4DIPQ5VU43 2346 aa18.71■□□□□ 0.59
RNF40-206ENST00000564260 ZNF862O60290 1169 aa18.71■□□□□ 0.59
RNF40-206ENST00000564260 F13A1P00488 732 aa18.71■□□□□ 0.59
RNF40-206ENST00000564260 PFKMP08237 780 aa18.71■□□□□ 0.59
RNF40-206ENST00000564260 ATP4AP20648 1035 aa18.71■□□□□ 0.59
RNF40-206ENST00000564260 RPA1P27694 616 aa18.71■□□□□ 0.59
RNF40-206ENST00000564260 BMP8BP34820 402 aa18.71■□□□□ 0.59
RNF40-206ENST00000564260 TECP42680 631 aa18.71■□□□□ 0.59
RNF40-206ENST00000564260 NME8Q8N427 588 aa18.71■□□□□ 0.59
RNF40-206ENST00000564260 RETREG2Q8NC44 543 aa18.71■□□□□ 0.59
RNF40-206ENST00000564260 UIMC1Q96RL1 719 aa18.71■□□□□ 0.59
RNF40-206ENST00000564260 CTAGE1Q96RT6 745 aa18.71■□□□□ 0.59
RNF40-206ENST00000564260 EIF2AK1Q9BQI3 630 aaKnown RBP18.71■□□□□ 0.59
RNF40-206ENST00000564260 LXNQ9BS40 222 aa18.71■□□□□ 0.59
RNF40-206ENST00000564260 SMIM35A0A1B0GVV1 85 aa18.7■□□□□ 0.58
RNF40-206ENST00000564260 H0YGN5 161 aa18.7■□□□□ 0.58
RNF40-206ENST00000564260 GAS2O43903 313 aaKnown RBP18.7■□□□□ 0.58
RNF40-206ENST00000564260 SLITRK3O94933 977 aa18.7■□□□□ 0.58
RNF40-206ENST00000564260 BRD1O95696 1058 aa18.7■□□□□ 0.58
RNF40-206ENST00000564260 CDC42EP1Q00587 391 aa18.7■□□□□ 0.58
RNF40-206ENST00000564260 NBR1Q14596 966 aa18.7■□□□□ 0.58
RNF40-206ENST00000564260 MARCH8Q5T0T0 291 aa18.7■□□□□ 0.58
RNF40-206ENST00000564260 ANKEF1Q9NU02 776 aa18.7■□□□□ 0.58
RNF40-206ENST00000564260 LRWD1Q9UFC0 647 aa18.7■□□□□ 0.58
RNF40-206ENST00000564260 A0A1W2PPC1 479 aa18.69■□□□□ 0.58
RNF40-206ENST00000564260 POTEMA6NI47 508 aa18.69■□□□□ 0.58
RNF40-206ENST00000564260 TREHO43280 583 aa18.69■□□□□ 0.58
RNF40-206ENST00000564260 TMOD1P28289 359 aa18.69■□□□□ 0.58
RNF40-206ENST00000564260 LONP1P36776 959 aaKnown RBP18.69■□□□□ 0.58
RNF40-206ENST00000564260 NASPP49321 788 aaPredicted RBP18.69■□□□□ 0.58
RNF40-206ENST00000564260 NUCB2P80303 420 aa18.69■□□□□ 0.58
RNF40-206ENST00000564260 PPIGQ13427 754 aaKnown RBP eCLIP18.69■□□□□ 0.587e-7■■□□□ 13.1
RNF40-206ENST00000564260 SF3A1Q15459 793 aaKnown RBP18.69■□□□□ 0.58
RNF40-206ENST00000564260 TARBP2Q15633 366 aaKnown RBP18.69■□□□□ 0.58
RNF40-206ENST00000564260 TRIM71Q2Q1W2 868 aaKnown RBP18.69■□□□□ 0.58
RNF40-206ENST00000564260 KRT79Q5XKE5 535 aa18.69■□□□□ 0.58
RNF40-206ENST00000564260 SH3RF1Q7Z6J0 888 aa18.69■□□□□ 0.58
RNF40-206ENST00000564260 DAXXQ9UER7 740 aaPredicted RBP18.69■□□□□ 0.58
RNF40-206ENST00000564260 CFAP45Q9UL16 551 aa18.69■□□□□ 0.58
RNF40-206ENST00000564260 ZBTB42B2RXF5 422 aa18.68■□□□□ 0.58
RNF40-206ENST00000564260 YEATS4O95619 227 aa18.68■□□□□ 0.58
RNF40-206ENST00000564260 CYP2C9P11712 490 aa18.68■□□□□ 0.58
RNF40-206ENST00000564260 SELPP16109 830 aa18.68■□□□□ 0.58
RNF40-206ENST00000564260 YWHABP31946 246 aaKnown RBP18.68■□□□□ 0.58
RNF40-206ENST00000564260 UGCGQ16739 394 aa18.68■□□□□ 0.58
RNF40-206ENST00000564260 MTHFD1LQ6UB35 978 aa18.68■□□□□ 0.58
RNF40-206ENST00000564260 RPUSD2Q8IZ73 545 aaKnown RBP18.68■□□□□ 0.58
RNF40-206ENST00000564260 BANK1Q8NDB2 785 aa18.68■□□□□ 0.58
RNF40-206ENST00000564260 DYDC2Q96IM9 177 aa18.68■□□□□ 0.58
RNF40-206ENST00000564260 GDF15Q99988 308 aa18.68■□□□□ 0.58
RNF40-206ENST00000564260 ZMYND8Q9ULU4 1186 aaPredicted RBP18.68■□□□□ 0.58
RNF40-206ENST00000564260 SQORQ9Y6N5 450 aa18.68■□□□□ 0.58
RNF40-206ENST00000564260 KDM3AQ9Y4C1 1321 aa18.68■□□□□ 0.58
RNF40-206ENST00000564260 STBD1O95210 358 aa18.67■□□□□ 0.58
RNF40-206ENST00000564260 C22orf31O95567 290 aa18.67■□□□□ 0.58
RNF40-206ENST00000564260 CKBP12277 381 aa18.67■□□□□ 0.58
RNF40-206ENST00000564260 RFC5P40937 340 aa18.67■□□□□ 0.58
RNF40-206ENST00000564260 FPGSQ05932 587 aa18.67■□□□□ 0.58
RNF40-206ENST00000564260 TBC1D8BQ0IIM8 1120 aa18.67■□□□□ 0.58
RNF40-206ENST00000564260 HIC1Q14526 733 aa18.67■□□□□ 0.58
RNF40-206ENST00000564260 SLC39A14Q15043 492 aa18.67■□□□□ 0.58
RNF40-206ENST00000564260 PTPAQ15257 358 aa18.67■□□□□ 0.58
RNF40-206ENST00000564260 FAM26DQ5JW98 314 aa18.67■□□□□ 0.58
RNF40-206ENST00000564260 IER5Q5VY09 327 aa18.67■□□□□ 0.58
RNF40-206ENST00000564260 ANO5Q75V66 913 aa18.67■□□□□ 0.58
RNF40-206ENST00000564260 DHX38Q92620 1227 aaKnown RBP18.67■□□□□ 0.58
RNF40-206ENST00000564260 NACC1Q96RE7 527 aa18.67■□□□□ 0.58
RNF40-206ENST00000564260 NT5C3AQ9H0P0 336 aa18.67■□□□□ 0.58
RNF40-206ENST00000564260 SEPT9Q9UHD8 586 aaPredicted RBP18.67■□□□□ 0.58
RNF40-206ENST00000564260 DBR1Q9UK59 544 aaKnown RBP18.67■□□□□ 0.58
RNF40-206ENST00000564260 CIZ1Q9ULV3 898 aaPredicted RBP18.67■□□□□ 0.58
RNF40-206ENST00000564260 IGKV6-21A0A0C4DH24 114 aa18.66■□□□□ 0.58
RNF40-206ENST00000564260 PPP6R2O75170 966 aa18.66■□□□□ 0.58
RNF40-206ENST00000564260 IQCF3P0C7M6 154 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms