RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 E9PMD0 336 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 STAMBPO95630 424 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 AARSP49588 968 aaKnown RBP eCLIP13.64□□□□□ -0.23
COMMD4-209ENST00000564068 PSMD2Q13200 908 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 RAB3IL1Q8TBN0 382 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 FNBP1Q96RU3 617 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 TMEM260Q9NX78 707 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 GCFC2P16383 781 aaKnown RBP13.64□□□□□ -0.23
COMMD4-209ENST00000564068 CA4P22748 312 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 RCAN1P53805 252 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 PMS1P54277 932 aaKnown RBP13.64□□□□□ -0.23
COMMD4-209ENST00000564068 SLC18A3Q16572 532 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 TRAPPC3LQ5T215 181 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 DCUN1D2Q6PH85 259 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 DPP8Q6V1X1 898 aaPredicted RBP13.64□□□□□ -0.23
COMMD4-209ENST00000564068 MIPOL1Q8TD10 442 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 P3H4Q92791 437 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 ISCA1Q9BUE6 129 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 SCOCQ9UIL1 159 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 ANAPC5Q9UJX4 755 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 PCDHA1Q9Y5I3 950 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 FAM153BP0C7A2 387 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 FGFR4P22455 802 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 PRDX5P30044 214 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 FAM153CQ494X1 144 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 EARS2Q5JPH6 523 aaKnown RBP13.64□□□□□ -0.23
COMMD4-209ENST00000564068 WDR44Q5JSH3 913 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 PPP1R21Q6ZMI0 780 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 GLYCTKQ8IVS8 523 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 ZC3H12CQ9C0D7 883 aaKnown RBP13.64□□□□□ -0.23
COMMD4-209ENST00000564068 NOD2Q9HC29 1040 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 TYW1Q9NV66 732 aaKnown RBP13.64□□□□□ -0.23
COMMD4-209ENST00000564068 FAM153AQ9UHL3 310 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 TMEM131LA2VDJ0 1609 aa13.64□□□□□ -0.23
COMMD4-209ENST00000564068 PVALEFA0A1B0GWK0 134 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 BRAFP15056 766 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 TCP10Q12799 353 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 RCN2Q14257 317 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 ODR4Q5SWX8 454 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 SDCCAG8Q86SQ7 713 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-209ENST00000564068 ZNF653Q96CK0 615 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 CCSER1Q9C0I3 900 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 SPATA31A6Q5VVP1 1343 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 COL15A1P39059 1388 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 TCP11X1B4DZS4 312 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 ACTN1P12814 892 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 CRKLP46109 303 aaKnown RBP13.63□□□□□ -0.23
COMMD4-209ENST00000564068 CFAP157Q5JU67 520 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 LIN9Q5TKA1 542 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 SEPT14Q6ZU15 432 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 DGKHQ86XP1 1220 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 TMOD4Q9NZQ9 345 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 DBR1Q9UK59 544 aaKnown RBP13.63□□□□□ -0.23
COMMD4-209ENST00000564068 ERFP50548 548 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 MDM2Q00987 491 aaPredicted RBP13.63□□□□□ -0.23
COMMD4-209ENST00000564068 STRN3Q13033 797 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 COASYQ13057 564 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 BYSLQ13895 437 aaKnown RBP13.63□□□□□ -0.23
COMMD4-209ENST00000564068 SUSD4Q5VX71 490 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 EP400NLQ6ZTU2 488 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 CEP128Q6ZU80 1094 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.63□□□□□ -0.23
COMMD4-209ENST00000564068 OSBPL1AQ9BXW6 950 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 VCX3BQ9H321 246 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 VCPKMTQ9H867 229 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 CCT8L1PA6NM43 557 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 I3L4J1 428 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 RAD23BP54727 409 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 NSMFQ6X4W1 530 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 PALM2Q8IXS6 379 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 MAIP1Q8WWC4 291 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 MTA3Q9BTC8 594 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 PCIF1Q9H4Z3 704 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 ARHGAP20Q9P2F6 1191 aa13.63□□□□□ -0.23
COMMD4-209ENST00000564068 SSU72P8A0A1W2PR75 194 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 COPB2P35606 906 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 PSMC2P35998 433 aaKnown RBP13.62□□□□□ -0.23
COMMD4-209ENST00000564068 MYL7Q01449 175 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 SPATA24Q86W54 205 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 CNBD1Q8NA66 436 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 USP38Q8NB14 1042 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 RAPGEF5Q92565 580 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 RUBCNQ92622 972 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 BRIP1Q9BX63 1249 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 UBE2TQ9NPD8 197 aaPredicted RBP13.62□□□□□ -0.23
COMMD4-209ENST00000564068 DCP1AQ9NPI6 582 aaPredicted RBP13.62□□□□□ -0.23
COMMD4-209ENST00000564068 RABGAP1Q9Y3P9 1069 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 CFAP73A6NFT4 308 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 SKIP12755 728 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 ZC3H18Q86VM9 953 aaKnown RBP13.62□□□□□ -0.23
COMMD4-209ENST00000564068 ANKS1AQ92625 1134 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 GLT8D2Q9H1C3 349 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 EXOC1LA0A1B0GW35 172 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 RNF225M0QZC1 329 aaPredicted RBP13.62□□□□□ -0.23
COMMD4-209ENST00000564068 TDP2O95551 362 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 SCTRP47872 440 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 ZYXQ15942 572 aaKnown RBP13.62□□□□□ -0.23
COMMD4-209ENST00000564068 MFSD14BQ5SR56 506 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 NT5DC1Q5TFE4 455 aa13.62□□□□□ -0.23
COMMD4-209ENST00000564068 KCTD1Q719H9 257 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms