RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 ZBTB42B2RXF5 422 aa22.87■■□□□ 1.25
CMTM3-206ENST00000563672 ZNF862O60290 1169 aa22.87■■□□□ 1.25
CMTM3-206ENST00000563672 SMAD3P84022 425 aaKnown RBP22.87■■□□□ 1.25
CMTM3-206ENST00000563672 PPP2R5CQ13362 524 aa22.87■■□□□ 1.25
CMTM3-206ENST00000563672 FAM26DQ5JW98 314 aa22.87■■□□□ 1.25
CMTM3-206ENST00000563672 MIER3Q7Z3K6 550 aa22.87■■□□□ 1.25
CMTM3-206ENST00000563672 TRAPPC12Q8WVT3 735 aa22.87■■□□□ 1.25
CMTM3-206ENST00000563672 BBXQ8WY36 941 aaPredicted RBP22.87■■□□□ 1.25
CMTM3-206ENST00000563672 ZBTB10Q96DT7 871 aa22.87■■□□□ 1.25
CMTM3-206ENST00000563672 FTOQ9C0B1 505 aaKnown RBP eCLIP22.87■■□□□ 1.25
CMTM3-206ENST00000563672 MTIF3Q9H2K0 278 aaKnown RBP22.87■■□□□ 1.25
CMTM3-206ENST00000563672 TANC1Q9C0D5 1861 aa22.86■■□□□ 1.25
CMTM3-206ENST00000563672 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.86■■□□□ 1.25
CMTM3-206ENST00000563672 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.86■■□□□ 1.25
CMTM3-206ENST00000563672 U2AF2P26368 475 aaKnown RBP eCLIP22.86■■□□□ 1.25
CMTM3-206ENST00000563672 GJB2P29033 226 aa22.86■■□□□ 1.25
CMTM3-206ENST00000563672 CUL4AQ13619 759 aa22.86■■□□□ 1.25
CMTM3-206ENST00000563672 UGCGQ16739 394 aa22.86■■□□□ 1.25
CMTM3-206ENST00000563672 ZNF484Q5JVG2 852 aa22.86■■□□□ 1.25
CMTM3-206ENST00000563672 CKAP2LQ8IYA6 745 aa22.86■■□□□ 1.25
CMTM3-206ENST00000563672 SLFN12Q8IYM2 578 aa22.86■■□□□ 1.25
CMTM3-206ENST00000563672 PCDHA2Q9Y5H9 948 aa22.86■■□□□ 1.25
CMTM3-206ENST00000563672 COL1A2P08123 1366 aa22.86■■□□□ 1.25
CMTM3-206ENST00000563672 SCN5AQ14524 2016 aa22.86■■□□□ 1.25
CMTM3-206ENST00000563672 KIF28PB7ZC32 967 aa22.85■■□□□ 1.25
CMTM3-206ENST00000563672 EML1O00423 815 aa22.85■■□□□ 1.25
CMTM3-206ENST00000563672 ACTN1P12814 892 aa22.85■■□□□ 1.25
CMTM3-206ENST00000563672 FAM109BQ6ICB4 259 aaPredicted RBP22.85■■□□□ 1.25
CMTM3-206ENST00000563672 MTHFD1LQ6UB35 978 aa22.85■■□□□ 1.25
CMTM3-206ENST00000563672 NOSTRINQ8IVI9 506 aa22.85■■□□□ 1.25
CMTM3-206ENST00000563672 FAM167AQ96KS9 214 aa22.85■■□□□ 1.25
CMTM3-206ENST00000563672 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.85■■□□□ 1.25
CMTM3-206ENST00000563672 SMIM35A0A1B0GVV1 85 aa22.84■■□□□ 1.25
CMTM3-206ENST00000563672 MARCH6O60337 910 aa22.84■■□□□ 1.25
CMTM3-206ENST00000563672 BAG4O95429 457 aaKnown RBP22.84■■□□□ 1.25
CMTM3-206ENST00000563672 CTSHP09668 335 aa22.84■■□□□ 1.25
CMTM3-206ENST00000563672 KLRC1P26715 233 aa22.84■■□□□ 1.25
CMTM3-206ENST00000563672 SPIRE1Q08AE8 756 aa22.84■■□□□ 1.25
CMTM3-206ENST00000563672 RSPH3Q86UC2 560 aa22.84■■□□□ 1.25
CMTM3-206ENST00000563672 DNAJB3Q8WWF6 145 aa22.84■■□□□ 1.25
CMTM3-206ENST00000563672 SMC3Q9UQE7 1217 aa22.84■■□□□ 1.25
CMTM3-206ENST00000563672 TET1Q8NFU7 2136 aa22.84■■□□□ 1.25
CMTM3-206ENST00000563672 KAT6AQ92794 2004 aa22.83■■□□□ 1.25
CMTM3-206ENST00000563672 CHRNA1P02708 482 aa22.83■■□□□ 1.25
CMTM3-206ENST00000563672 OATP04181 439 aa22.83■■□□□ 1.25
CMTM3-206ENST00000563672 RPLP2P05387 115 aaKnown RBP22.83■■□□□ 1.25
CMTM3-206ENST00000563672 PRKCEQ02156 737 aa22.83■■□□□ 1.25
CMTM3-206ENST00000563672 MGAT3Q09327 533 aa22.83■■□□□ 1.25
CMTM3-206ENST00000563672 CALCRLQ16602 461 aa22.83■■□□□ 1.25
CMTM3-206ENST00000563672 TCTN1Q2MV58 587 aa22.83■■□□□ 1.25
CMTM3-206ENST00000563672 CNKSR3Q6P9H4 555 aa22.83■■□□□ 1.25
CMTM3-206ENST00000563672 MTMR9Q96QG7 549 aa22.83■■□□□ 1.25
CMTM3-206ENST00000563672 OSBPL7Q9BZF2 842 aa22.83■■□□□ 1.25
CMTM3-206ENST00000563672 NRBP2Q9NSY0 501 aa22.83■■□□□ 1.25
CMTM3-206ENST00000563672 RBAK-RBAKDNI3L0D1 243 aa22.82■■□□□ 1.24
CMTM3-206ENST00000563672 NEMFO60524 1076 aa22.82■■□□□ 1.24
CMTM3-206ENST00000563672 BAIAP3O94812 1187 aa22.82■■□□□ 1.24
CMTM3-206ENST00000563672 STBD1O95210 358 aa22.82■■□□□ 1.24
CMTM3-206ENST00000563672 ATP2B1P20020 1258 aa22.82■■□□□ 1.24
CMTM3-206ENST00000563672 GNL2Q13823 731 aaKnown RBP22.82■■□□□ 1.24
CMTM3-206ENST00000563672 FAM49AQ9H0Q0 323 aaPredicted RBP22.82■■□□□ 1.24
CMTM3-206ENST00000563672 CEP131Q9UPN4 1083 aa22.82■■□□□ 1.24
CMTM3-206ENST00000563672 SLC4A7Q9Y6M7 1214 aa22.82■■□□□ 1.24
CMTM3-206ENST00000563672 ZBBXA8MT70 800 aa22.81■■□□□ 1.24
CMTM3-206ENST00000563672 GRXCR1A8MXD5 290 aa22.81■■□□□ 1.24
CMTM3-206ENST00000563672 C22orf31O95567 290 aa22.81■■□□□ 1.24
CMTM3-206ENST00000563672 MCM7P33993 719 aa22.81■■□□□ 1.24
CMTM3-206ENST00000563672 TRAPPC10P48553 1259 aa22.81■■□□□ 1.24
CMTM3-206ENST00000563672 ORC2Q13416 577 aaPredicted RBP22.81■■□□□ 1.24
CMTM3-206ENST00000563672 EPHA7Q15375 998 aa22.81■■□□□ 1.24
CMTM3-206ENST00000563672 PLEKHG4Q58EX7 1191 aa22.81■■□□□ 1.24
CMTM3-206ENST00000563672 XKR3Q5GH77 459 aa22.81■■□□□ 1.24
CMTM3-206ENST00000563672 TRMT1LQ7Z2T5 733 aaKnown RBP22.81■■□□□ 1.24
CMTM3-206ENST00000563672 NME8Q8N427 588 aa22.81■■□□□ 1.24
CMTM3-206ENST00000563672 TMEM60Q9H2L4 133 aa22.81■■□□□ 1.24
CMTM3-206ENST00000563672 PCDHA12Q9UN75 941 aa22.81■■□□□ 1.24
CMTM3-206ENST00000563672 PSMC5P62195 406 aa22.8■■□□□ 1.24
CMTM3-206ENST00000563672 MRPS6P82932 125 aaKnown RBP22.8■■□□□ 1.24
CMTM3-206ENST00000563672 TARBP2Q15633 366 aaKnown RBP22.8■■□□□ 1.24
CMTM3-206ENST00000563672 KIAA0319LQ8IZA0 1049 aa22.8■■□□□ 1.24
CMTM3-206ENST00000563672 BANK1Q8NDB2 785 aa22.8■■□□□ 1.24
CMTM3-206ENST00000563672 DBF4BQ8NFT6 615 aa22.8■■□□□ 1.24
CMTM3-206ENST00000563672 NIFKQ9BYG3 293 aaKnown RBP22.8■■□□□ 1.24
CMTM3-206ENST00000563672 CDY2AQ9Y6F7 541 aa22.8■■□□□ 1.24
CMTM3-206ENST00000563672 ABHD14A-ACY1A0A1B0GW23 586 aa22.79■■□□□ 1.24
CMTM3-206ENST00000563672 MAGEB2O15479 319 aa22.79■■□□□ 1.24
CMTM3-206ENST00000563672 P4HBP07237 508 aaKnown RBP22.79■■□□□ 1.24
CMTM3-206ENST00000563672 QARSP47897 775 aaKnown RBP22.79■■□□□ 1.24
CMTM3-206ENST00000563672 IKBKEQ14164 716 aa22.79■■□□□ 1.24
CMTM3-206ENST00000563672 ZNF174Q15697 407 aa22.79■■□□□ 1.24
CMTM3-206ENST00000563672 TTC38Q5R3I4 469 aa22.79■■□□□ 1.24
CMTM3-206ENST00000563672 IER5Q5VY09 327 aa22.79■■□□□ 1.24
CMTM3-206ENST00000563672 PHOSPHO2Q8TCD6 241 aa22.79■■□□□ 1.24
CMTM3-206ENST00000563672 TTC12Q9H892 705 aaPredicted RBP22.79■■□□□ 1.24
CMTM3-206ENST00000563672 SLC34A2O95436 690 aa22.78■■□□□ 1.24
CMTM3-206ENST00000563672 ATP2A2P16615 1042 aaKnown RBP22.78■■□□□ 1.24
CMTM3-206ENST00000563672 TXKP42681 527 aa22.78■■□□□ 1.24
CMTM3-206ENST00000563672 TOB1P50616 345 aaPredicted RBP22.78■■□□□ 1.24
CMTM3-206ENST00000563672 MKRN4PQ13434 485 aaPredicted RBP22.78■■□□□ 1.24
CMTM3-206ENST00000563672 LARP1BQ659C4 914 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms