RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 NFIXQ14938 502 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 FIGNQ5HY92 759 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 LRRC34Q8IZ02 419 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 AGAP11Q8TF27 550 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 MRRFQ96E11 262 aaKnown RBP13.85□□□□□ -0.19
CCDC187-201ENST00000563590 FAM84BQ96KN1 310 aaPredicted RBP13.85□□□□□ -0.19
CCDC187-201ENST00000563590 PANK4Q9NVE7 773 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 G3BP2Q9UN86 482 aaKnown RBP13.85□□□□□ -0.19
CCDC187-201ENST00000563590 SIK3Q9Y2K2 1263 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 KCNJ2P63252 427 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 DRP2Q13474 957 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 PLCB4Q15147 1175 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 CHADLQ6NUI6 762 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 FAM47EQ6ZV65 393 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 SV2BQ7L1I2 683 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 SPICE1Q8N0Z3 855 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 SH3RF3Q8TEJ3 882 aaPredicted RBP13.85□□□□□ -0.19
CCDC187-201ENST00000563590 XPO6Q96QU8 1125 aaKnown RBP13.85□□□□□ -0.19
CCDC187-201ENST00000563590 TRIM9Q9C026 710 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 NARFQ9UHQ1 456 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 SNX24Q9Y343 169 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 C21orf2O43822 256 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 CAND2O75155 1236 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 ITGA4P13612 1032 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 HNRNPH3P31942 346 aaKnown RBP13.85□□□□□ -0.19
CCDC187-201ENST00000563590 USH1GQ495M9 461 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 YTHDF3Q7Z739 585 aaKnown RBP13.85□□□□□ -0.19
CCDC187-201ENST00000563590 EGFL6Q8IUX8 553 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 SEMA6BQ9H3T3 888 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 ECT2Q9H8V3 914 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 ARPP21Q9UBL0 812 aaPredicted RBP13.85□□□□□ -0.19
CCDC187-201ENST00000563590 A8MUI8 341 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 IGF2BP3O00425 579 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCDC187-201ENST00000563590 PSMD2Q13200 908 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 ZNF211Q13398 564 aaPredicted RBP13.84□□□□□ -0.19
CCDC187-201ENST00000563590 MTMR3Q13615 1198 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 CCDC6Q16204 474 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 TXNRD1Q16881 649 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 NUGGCQ68CJ6 796 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 HOOK3Q86VS8 718 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 VSIG1Q86XK7 387 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 SH3GL3Q99963 347 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 BCS1LQ9Y276 419 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCDC187-201ENST00000563590 PHLPP1O60346 1717 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 HIP1RO75146 1068 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 CALML3P27482 149 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 ERFP50548 548 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 FMO2Q99518 471 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 OSBPL1AQ9BXW6 950 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 TMEM260Q9NX78 707 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 UTRNP46939 3433 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 KLRF2D3W0D1 207 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 PGRMC1O00264 195 aaKnown RBP13.84□□□□□ -0.19
CCDC187-201ENST00000563590 MAN2A1Q16706 1144 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 MFSD14BQ5SR56 506 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 KIAA0895Q8NCT3 520 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 TSC22D3Q99576 134 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 RIOK1Q9BRS2 568 aaKnown RBP13.84□□□□□ -0.19
CCDC187-201ENST00000563590 ABCF3Q9NUQ8 709 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 PTPN22Q9Y2R2 807 aa13.84□□□□□ -0.19
CCDC187-201ENST00000563590 UBOX5O94941 541 aa13.83□□□□□ -0.2
CCDC187-201ENST00000563590 TAL1P17542 331 aaPredicted RBP13.83□□□□□ -0.2
CCDC187-201ENST00000563590 UBXN2AP68543 259 aa13.83□□□□□ -0.2
CCDC187-201ENST00000563590 BIRC3Q13489 604 aa13.83□□□□□ -0.2
CCDC187-201ENST00000563590 FBF1Q8TES7 1133 aa13.83□□□□□ -0.2
CCDC187-201ENST00000563590 PAGR1Q9BTK6 254 aa13.83□□□□□ -0.2
CCDC187-201ENST00000563590 CCSER1Q9C0I3 900 aa13.83□□□□□ -0.2
CCDC187-201ENST00000563590 PCDHA4Q9UN74 947 aa13.83□□□□□ -0.2
CCDC187-201ENST00000563590 A0A087X0T9 212 aa13.83□□□□□ -0.2
CCDC187-201ENST00000563590 SMCO2A6NFE2 343 aa13.83□□□□□ -0.2
CCDC187-201ENST00000563590 CHMP2AO43633 222 aa13.83□□□□□ -0.2
CCDC187-201ENST00000563590 FAM228BP0C875 321 aa13.83□□□□□ -0.2
CCDC187-201ENST00000563590 FAM83BQ5T0W9 1011 aa13.83□□□□□ -0.2
CCDC187-201ENST00000563590 U2AF1L4Q8WU68 220 aaKnown RBP13.83□□□□□ -0.2
CCDC187-201ENST00000563590 TBK1Q9UHD2 729 aa13.83□□□□□ -0.2
CCDC187-201ENST00000563590 DBR1Q9UK59 544 aaKnown RBP13.83□□□□□ -0.2
CCDC187-201ENST00000563590 C15orf41Q9Y2V0 281 aa13.83□□□□□ -0.2
CCDC187-201ENST00000563590 NOC2LQ9Y3T9 749 aaKnown RBP13.83□□□□□ -0.2
CCDC187-201ENST00000563590 LCA5LO95447 670 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 BAG3O95817 575 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 FGGP02679 453 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 UBE2SQ16763 222 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 SLC30A10Q6XR72 485 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 BZW1Q7L1Q6 419 aaKnown RBP13.82□□□□□ -0.2
CCDC187-201ENST00000563590 TRPM8Q7Z2W7 1104 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 LONP2Q86WA8 852 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 USP38Q8NB14 1042 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 TRIM33Q9UPN9 1127 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 SERPINB2P05120 415 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 MYL1P05976 194 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 ZNF76P36508 570 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 GRIK5Q16478 980 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 CLEC4GQ6UXB4 293 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 KCTD1Q719H9 257 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 BAP1Q92560 729 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 HOOK2Q96ED9 719 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 NEUROG2Q9H2A3 272 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 ZBTB21Q9ULJ3 1066 aa13.82□□□□□ -0.2
CCDC187-201ENST00000563590 ZNF804BA4D1E1 1349 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms