RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 CRELD2Q6UXH1 353 aaPredicted RBP17.96■□□□□ 0.47
TPM1-228ENST00000560975 ZNF34Q8IZ26 560 aa17.96■□□□□ 0.47
TPM1-228ENST00000560975 ZNF483Q8TF39 744 aaPredicted RBP17.96■□□□□ 0.47
TPM1-228ENST00000560975 RAD54LQ92698 747 aa17.96■□□□□ 0.47
TPM1-228ENST00000560975 ADAM7Q9H2U9 754 aa17.96■□□□□ 0.47
TPM1-228ENST00000560975 CASZ1Q86V15 1759 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 ASAP2O43150 1006 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 GSTA1P08263 222 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 NQO1P15559 274 aaKnown RBP17.95■□□□□ 0.46
TPM1-228ENST00000560975 CALRP27797 417 aaKnown RBP17.95■□□□□ 0.46
TPM1-228ENST00000560975 MECOMQ03112 1051 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 CALCRLQ16602 461 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 IFI16Q16666 785 aaKnown RBP17.95■□□□□ 0.46
TPM1-228ENST00000560975 CCDC38Q502W7 563 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 ATP8B4Q8TF62 1192 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 GLG1Q92896 1179 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 GJA10Q969M2 543 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 CENPTQ96BT3 561 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 L3MBTL3Q96JM7 780 aaPredicted RBP17.95■□□□□ 0.46
TPM1-228ENST00000560975 ZMYND12Q9H0C1 365 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 SLITRK6Q9H5Y7 841 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 NAGPAQ9UK23 515 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 RGS16O15492 202 aaPredicted RBP17.95■□□□□ 0.46
TPM1-228ENST00000560975 COASYQ13057 564 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 ITIH4Q14624 930 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 CAPRIN2Q6IMN6 1127 aaKnown RBP17.95■□□□□ 0.46
TPM1-228ENST00000560975 GALNT17Q6IS24 598 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 MGARPQ8TDB4 240 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 FAM167BQ9BTA0 163 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 GANQ9H2C0 597 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 ECT2Q9H8V3 914 aa17.95■□□□□ 0.46
TPM1-228ENST00000560975 IGF2BP3O00425 579 aaKnown RBP eCLIP17.94■□□□□ 0.46
TPM1-228ENST00000560975 PPFIA2O75334 1257 aa17.94■□□□□ 0.46
TPM1-228ENST00000560975 ZBTB48P10074 688 aaPredicted RBP17.94■□□□□ 0.46
TPM1-228ENST00000560975 EIF3BP55884 814 aaKnown RBP17.94■□□□□ 0.46
TPM1-228ENST00000560975 IRF2BP2Q7Z5L9 587 aa17.94■□□□□ 0.46
TPM1-228ENST00000560975 BATF3Q9NR55 127 aa17.94■□□□□ 0.46
TPM1-228ENST00000560975 STK17AQ9UEE5 414 aa17.94■□□□□ 0.46
TPM1-228ENST00000560975 SNX24Q9Y343 169 aa17.94■□□□□ 0.46
TPM1-228ENST00000560975 ADAMTSL3P82987 1691 aa17.94■□□□□ 0.46
TPM1-228ENST00000560975 DLEC1Q9Y238 1755 aa17.94■□□□□ 0.46
TPM1-228ENST00000560975 UPP2O95045 317 aa17.94■□□□□ 0.46
TPM1-228ENST00000560975 GNAQP50148 359 aa17.94■□□□□ 0.46
TPM1-228ENST00000560975 NCALDP61601 193 aa17.94■□□□□ 0.46
TPM1-228ENST00000560975 LRRC14Q15048 493 aa17.94■□□□□ 0.46
TPM1-228ENST00000560975 DENND2CQ68D51 928 aa17.94■□□□□ 0.46
TPM1-228ENST00000560975 MAEAQ7L5Y9 396 aa17.94■□□□□ 0.46
TPM1-228ENST00000560975 TRIM59Q8IWR1 403 aa17.94■□□□□ 0.46
TPM1-228ENST00000560975 RNF25Q96BH1 459 aaPredicted RBP17.94■□□□□ 0.46
TPM1-228ENST00000560975 EPB41L4BQ9H329 900 aa17.94■□□□□ 0.46
TPM1-228ENST00000560975 MKNK2Q9HBH9 465 aa17.94■□□□□ 0.46
TPM1-228ENST00000560975 CFAP73A6NFT4 308 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 KLRF2D3W0D1 207 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 SLC37A4O43826 429 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 TDP2O95551 362 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 ATF3P18847 181 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 MMP13P45452 471 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 PMS2P54278 862 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 KCNH2Q12809 1159 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 RIPK1Q13546 671 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 ZCWPW2Q504Y3 356 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 FAM26FQ5R3K3 315 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 ERICH1Q86X53 443 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 PROM2Q8N271 834 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 KCNV2Q8TDN2 545 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 NSUN4Q96CB9 384 aaKnown RBP17.93■□□□□ 0.46
TPM1-228ENST00000560975 ZHX3Q9H4I2 956 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 C6orf50Q9HD87 102 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 KIF3CO14782 793 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 RARAP10276 462 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 SLC29A2Q14542 456 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 ECM1Q16610 540 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 SOGA3Q5TF21 947 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 SLC44A5Q8NCS7 719 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 NEK9Q8TD19 979 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 YIPF3Q9GZM5 350 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 THRAP3Q9Y2W1 955 aaKnown RBP17.93■□□□□ 0.46
TPM1-228ENST00000560975 AFF2P51816 1311 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 PAPPAQ13219 1627 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 NPHP3-ACAD11A0A0J9YXS1 232 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 ZNF268Q14587 947 aaPredicted RBP17.93■□□□□ 0.46
TPM1-228ENST00000560975 CAVIN4Q5BKX8 364 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 CCHCR1Q8TD31 782 aa17.93■□□□□ 0.46
TPM1-228ENST00000560975 EPS8L3Q8TE67 593 aaKnown RBP17.93■□□□□ 0.46
TPM1-228ENST00000560975 CACNA1SQ13698 1873 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 ZNF211Q13398 564 aaPredicted RBP17.92■□□□□ 0.46
TPM1-228ENST00000560975 ARHGAP27Q6ZUM4 889 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 DGKHQ86XP1 1220 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 U2AF1L4Q8WU68 220 aaKnown RBP17.92■□□□□ 0.46
TPM1-228ENST00000560975 SPATS2LQ9NUQ6 558 aaKnown RBP17.92■□□□□ 0.46
TPM1-228ENST00000560975 DBR1Q9UK59 544 aaKnown RBP17.92■□□□□ 0.46
TPM1-228ENST00000560975 TRIM33Q9UPN9 1127 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 LRP5O75197 1615 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 KRT16P08779 473 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 TSPY3P0CV98 308 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 TSPY8P0CW00 308 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 TRHP20396 242 aaPredicted RBP17.92■□□□□ 0.46
TPM1-228ENST00000560975 PRDX5P30044 214 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 DR1Q01658 176 aa17.92■□□□□ 0.46
TPM1-228ENST00000560975 ADAM9Q13443 819 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms