RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 IFIT1BQ5T764 474 aaKnown RBP23.4■■□□□ 1.34
PSEN1-225ENST00000560005 RUFY4Q6ZNE9 571 aa23.4■■□□□ 1.34
PSEN1-225ENST00000560005 CYB5R4Q7L1T6 521 aa23.4■■□□□ 1.34
PSEN1-225ENST00000560005 ADGRD2Q7Z7M1 963 aa23.4■■□□□ 1.34
PSEN1-225ENST00000560005 SGMS1Q86VZ5 419 aa23.4■■□□□ 1.34
PSEN1-225ENST00000560005 CCDC83Q8IWF9 413 aa23.4■■□□□ 1.34
PSEN1-225ENST00000560005 IGDCC4Q8TDY8 1250 aa23.4■■□□□ 1.34
PSEN1-225ENST00000560005 GTF3C6Q969F1 213 aa23.4■■□□□ 1.34
PSEN1-225ENST00000560005 PPP2R3CQ969Q6 453 aa23.4■■□□□ 1.34
PSEN1-225ENST00000560005 INPP4AQ96PE3 977 aaPredicted RBP23.4■■□□□ 1.34
PSEN1-225ENST00000560005 KIF3AQ9Y496 699 aa23.4■■□□□ 1.34
PSEN1-225ENST00000560005 TTC3P53804 2025 aa23.4■■□□□ 1.34
PSEN1-225ENST00000560005 NRCAMQ92823 1304 aa23.39■■□□□ 1.34
PSEN1-225ENST00000560005 SPATA31C2B4DYI2 1134 aa23.39■■□□□ 1.33
PSEN1-225ENST00000560005 LOC730098B7Z3J9 87 aa23.39■■□□□ 1.33
PSEN1-225ENST00000560005 DGKIO75912 1065 aa23.39■■□□□ 1.33
PSEN1-225ENST00000560005 PDCP20941 246 aa23.39■■□□□ 1.33
PSEN1-225ENST00000560005 RCAN1P53805 252 aa23.39■■□□□ 1.33
PSEN1-225ENST00000560005 MGAT3Q09327 533 aa23.39■■□□□ 1.33
PSEN1-225ENST00000560005 APOBRQ0VD83 1088 aa23.39■■□□□ 1.33
PSEN1-225ENST00000560005 SMRP1Q8NCR6 262 aa23.39■■□□□ 1.33
PSEN1-225ENST00000560005 P2RX5Q93086 422 aa23.39■■□□□ 1.33
PSEN1-225ENST00000560005 LARP6Q9BRS8 491 aaKnown RBP23.39■■□□□ 1.33
PSEN1-225ENST00000560005 RTEL1Q9NZ71 1219 aa23.39■■□□□ 1.33
PSEN1-225ENST00000560005 MAD2L2Q9UI95 211 aa23.39■■□□□ 1.33
PSEN1-225ENST00000560005 MRPL42Q9Y6G3 142 aaKnown RBP23.39■■□□□ 1.33
PSEN1-225ENST00000560005 MYO15AQ9UKN7 3530 aa23.38■■□□□ 1.33
PSEN1-225ENST00000560005 PDIA3P30101 505 aaKnown RBP23.38■■□□□ 1.33
PSEN1-225ENST00000560005 COL9A3Q14050 684 aaPredicted RBP23.38■■□□□ 1.33
PSEN1-225ENST00000560005 WTAPQ15007 396 aa23.38■■□□□ 1.33
PSEN1-225ENST00000560005 TAF2Q6P1X5 1199 aa23.38■■□□□ 1.33
PSEN1-225ENST00000560005 FBXL6Q8N531 539 aa23.38■■□□□ 1.33
PSEN1-225ENST00000560005 EFHBQ8N7U6 833 aa23.38■■□□□ 1.33
PSEN1-225ENST00000560005 FAM86C1Q9NVL1 165 aa23.38■■□□□ 1.33
PSEN1-225ENST00000560005 KAT6AQ92794 2004 aa23.38■■□□□ 1.33
PSEN1-225ENST00000560005 KMT2EQ8IZD2 1858 aa23.37■■□□□ 1.33
PSEN1-225ENST00000560005 CCDC69A6NI79 296 aa23.37■■□□□ 1.33
PSEN1-225ENST00000560005 FIBPO43427 364 aa23.37■■□□□ 1.33
PSEN1-225ENST00000560005 STAM2O75886 525 aa23.37■■□□□ 1.33
PSEN1-225ENST00000560005 LARGE1O95461 756 aa23.37■■□□□ 1.33
PSEN1-225ENST00000560005 ITGB1P05556 798 aa23.37■■□□□ 1.33
PSEN1-225ENST00000560005 HMGN5P82970 282 aaKnown RBP23.37■■□□□ 1.33
PSEN1-225ENST00000560005 COASYQ13057 564 aa23.37■■□□□ 1.33
PSEN1-225ENST00000560005 SLC35G1Q2M3R5 365 aa23.37■■□□□ 1.33
PSEN1-225ENST00000560005 NFXL1Q6ZNB6 911 aa23.37■■□□□ 1.33
PSEN1-225ENST00000560005 SPPL3Q8TCT6 385 aa23.37■■□□□ 1.33
PSEN1-225ENST00000560005 PIGSQ96S52 555 aa23.37■■□□□ 1.33
PSEN1-225ENST00000560005 BARX2Q9UMQ3 279 aaPredicted RBP23.37■■□□□ 1.33
PSEN1-225ENST00000560005 FRMPD4Q14CM0 1322 aa23.36■■□□□ 1.33
PSEN1-225ENST00000560005 KLF18A0A0U1RQI7 1052 aa23.36■■□□□ 1.33
PSEN1-225ENST00000560005 PALM3A6NDB9 673 aaPredicted RBP23.36■■□□□ 1.33
PSEN1-225ENST00000560005 GFRA3O60609 400 aa23.36■■□□□ 1.33
PSEN1-225ENST00000560005 NRIP1P48552 1158 aa23.36■■□□□ 1.33
PSEN1-225ENST00000560005 CBX2Q14781 532 aaPredicted RBP23.36■■□□□ 1.33
PSEN1-225ENST00000560005 FBXO47Q5MNV8 452 aa23.36■■□□□ 1.33
PSEN1-225ENST00000560005 CPLX2Q6PUV4 134 aaKnown RBP23.36■■□□□ 1.33
PSEN1-225ENST00000560005 RBM23Q86U06 439 aaKnown RBP23.36■■□□□ 1.33
PSEN1-225ENST00000560005 RSPH3Q86UC2 560 aa23.36■■□□□ 1.33
PSEN1-225ENST00000560005 KLHL23Q8NBE8 558 aa23.36■■□□□ 1.33
PSEN1-225ENST00000560005 LINC01599Q8WXQ3 324 aa23.36■■□□□ 1.33
PSEN1-225ENST00000560005 NAP1L2Q9ULW6 460 aaPredicted RBP23.36■■□□□ 1.33
PSEN1-225ENST00000560005 USP15Q9Y4E8 981 aaPredicted RBP23.36■■□□□ 1.33
PSEN1-225ENST00000560005 KIAA1671Q9BY89 1806 aa23.36■■□□□ 1.33
PSEN1-225ENST00000560005 BAZ2BQ9UIF8 2168 aaKnown RBP23.35■■□□□ 1.33
PSEN1-225ENST00000560005 GLP2RO95838 553 aa23.35■■□□□ 1.33
PSEN1-225ENST00000560005 VCPP55072 806 aaKnown RBP23.35■■□□□ 1.33
PSEN1-225ENST00000560005 TRAF1Q13077 416 aa23.35■■□□□ 1.33
PSEN1-225ENST00000560005 PPFIA1Q13136 1202 aa23.35■■□□□ 1.33
PSEN1-225ENST00000560005 STK3Q13188 491 aa23.35■■□□□ 1.33
PSEN1-225ENST00000560005 NAALADL2Q58DX5 795 aa23.35■■□□□ 1.33
PSEN1-225ENST00000560005 TSHZ1Q6ZSZ6 1077 aa23.35■■□□□ 1.33
PSEN1-225ENST00000560005 CMTR2Q8IYT2 770 aaKnown RBP23.35■■□□□ 1.33
PSEN1-225ENST00000560005 NECAB1Q8N987 351 aa23.35■■□□□ 1.33
PSEN1-225ENST00000560005 POF1BQ8WVV4 589 aa23.35■■□□□ 1.33
PSEN1-225ENST00000560005 LY9Q9HBG7 655 aa23.35■■□□□ 1.33
PSEN1-225ENST00000560005 SLC12A7Q9Y666 1083 aa23.35■■□□□ 1.33
PSEN1-225ENST00000560005 SIGLEC14Q08ET2 396 aa23.34■■□□□ 1.33
PSEN1-225ENST00000560005 SEC23AQ15436 765 aa23.34■■□□□ 1.33
PSEN1-225ENST00000560005 PAN2Q504Q3 1202 aaKnown RBP23.34■■□□□ 1.33
PSEN1-225ENST00000560005 DNAJB3Q8WWF6 145 aa23.34■■□□□ 1.33
PSEN1-225ENST00000560005 RPGRIP1Q96KN7 1286 aa23.34■■□□□ 1.33
PSEN1-225ENST00000560005 RIOX1Q9H6W3 641 aa23.34■■□□□ 1.33
PSEN1-225ENST00000560005 AGO3Q9H9G7 860 aaKnown RBP23.34■■□□□ 1.33
PSEN1-225ENST00000560005 TUBE1Q9UJT0 475 aa23.34■■□□□ 1.33
PSEN1-225ENST00000560005 PCDHGC5Q9Y5F6 944 aa23.34■■□□□ 1.33
PSEN1-225ENST00000560005 CDY2AQ9Y6F7 541 aa23.34■■□□□ 1.33
PSEN1-225ENST00000560005 CCDC196A0A1B0GTZ2 297 aa23.33■■□□□ 1.33
PSEN1-225ENST00000560005 ZBTB43O43298 467 aa23.33■■□□□ 1.33
PSEN1-225ENST00000560005 CDKL5O76039 1030 aa23.33■■□□□ 1.33
PSEN1-225ENST00000560005 GJB2P29033 226 aa23.33■■□□□ 1.33
PSEN1-225ENST00000560005 CD52P31358 61 aa23.33■■□□□ 1.33
PSEN1-225ENST00000560005 SCRN1Q12765 414 aa23.33■■□□□ 1.33
PSEN1-225ENST00000560005 PHF7Q9BWX1 381 aaPredicted RBP23.33■■□□□ 1.33
PSEN1-225ENST00000560005 SPTBN4Q9H254 2564 aa23.33■■□□□ 1.32
PSEN1-225ENST00000560005 GOLGA8BA8MQT2 603 aa23.32■■□□□ 1.32
PSEN1-225ENST00000560005 CPLX1O14810 134 aa23.32■■□□□ 1.32
PSEN1-225ENST00000560005 CYTH3O43739 400 aa23.32■■□□□ 1.32
PSEN1-225ENST00000560005 CALM1P0DP23 149 aa23.32■■□□□ 1.32
PSEN1-225ENST00000560005 CALM2P0DP24 149 aa23.32■■□□□ 1.32
PSEN1-225ENST00000560005 CALM3P0DP25 149 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms