RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 MTG1Q9BT17 334 aaPredicted RBP11.36□□□□□ -0.59
SPG11-212ENST00000558790 NIFKQ9BYG3 293 aaKnown RBP11.36□□□□□ -0.59
SPG11-212ENST00000558790 CERS4Q9HA82 394 aa11.36□□□□□ -0.59
SPG11-212ENST00000558790 SENP2Q9HC62 589 aa11.36□□□□□ -0.59
SPG11-212ENST00000558790 ADD3Q9UEY8 706 aaKnown RBP11.36□□□□□ -0.59
SPG11-212ENST00000558790 SALL3Q9BXA9 1300 aa11.35□□□□□ -0.59
SPG11-212ENST00000558790 LOC102724159A0A0B4J2E5 919 aa11.35□□□□□ -0.59
SPG11-212ENST00000558790 RBM47A0AV96 593 aaKnown RBP11.35□□□□□ -0.59
SPG11-212ENST00000558790 ORC4O43929 436 aa11.35□□□□□ -0.59
SPG11-212ENST00000558790 SUPT20HL2P0C7V6 817 aa11.35□□□□□ -0.59
SPG11-212ENST00000558790 MX1P20591 662 aa11.35□□□□□ -0.59
SPG11-212ENST00000558790 CALML3P27482 149 aa11.35□□□□□ -0.59
SPG11-212ENST00000558790 PPP2R5BQ15173 497 aa11.35□□□□□ -0.59
SPG11-212ENST00000558790 PWP2Q15269 919 aaKnown RBP11.35□□□□□ -0.59
SPG11-212ENST00000558790 FAM47CQ5HY64 1035 aa11.35□□□□□ -0.59
SPG11-212ENST00000558790 TMEM67Q5HYA8 995 aa11.35□□□□□ -0.59
SPG11-212ENST00000558790 BTNL9Q6UXG8 535 aa11.35□□□□□ -0.59
SPG11-212ENST00000558790 CLEC4DQ8WXI8 215 aa11.35□□□□□ -0.59
SPG11-212ENST00000558790 COPS5Q92905 334 aa11.35□□□□□ -0.59
SPG11-212ENST00000558790 SLC9A7Q96T83 725 aa11.35□□□□□ -0.59
SPG11-212ENST00000558790 ANAPC4Q9UJX5 808 aa11.35□□□□□ -0.59
SPG11-212ENST00000558790 MTCH2Q9Y6C9 303 aa11.35□□□□□ -0.59
SPG11-212ENST00000558790 RAD50Q92878 1312 aa11.35□□□□□ -0.59
SPG11-212ENST00000558790 BAZ2BQ9UIF8 2168 aaKnown RBP11.34□□□□□ -0.59
SPG11-212ENST00000558790 BAHCC1Q9P281 2608 aa11.34□□□□□ -0.59
SPG11-212ENST00000558790 SERTM1A2A2V5 107 aa11.34□□□□□ -0.59
SPG11-212ENST00000558790 EML1O00423 815 aa11.34□□□□□ -0.59
SPG11-212ENST00000558790 PDHBP11177 359 aa11.34□□□□□ -0.59
SPG11-212ENST00000558790 EDNRBP24530 442 aa11.34□□□□□ -0.59
SPG11-212ENST00000558790 NOS2P35228 1153 aa11.34□□□□□ -0.59
SPG11-212ENST00000558790 RFC2P35250 354 aa11.34□□□□□ -0.59
SPG11-212ENST00000558790 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.34□□□□□ -0.59
SPG11-212ENST00000558790 RRP12Q5JTH9 1297 aaKnown RBP11.34□□□□□ -0.59
SPG11-212ENST00000558790 NFRKBQ6P4R8 1299 aa11.34□□□□□ -0.59
SPG11-212ENST00000558790 RNF207Q6ZRF8 634 aa11.34□□□□□ -0.59
SPG11-212ENST00000558790 SPRED2Q7Z698 418 aa11.34□□□□□ -0.59
SPG11-212ENST00000558790 TMEM47Q9BQJ4 181 aa11.34□□□□□ -0.59
SPG11-212ENST00000558790 C2orf49Q9BVC5 232 aaPredicted RBP11.34□□□□□ -0.59
SPG11-212ENST00000558790 TOMM22Q9NS69 142 aa11.34□□□□□ -0.59
SPG11-212ENST00000558790 DNAH14Q0VDD8 3507 aa11.34□□□□□ -0.59
SPG11-212ENST00000558790 CFAP47Q6ZTR5 3102 aa11.34□□□□□ -0.59
SPG11-212ENST00000558790 RALGAPA2Q2PPJ7 1873 aa11.34□□□□□ -0.59
SPG11-212ENST00000558790 MYO7AQ13402 2215 aa11.33□□□□□ -0.59
SPG11-212ENST00000558790 KAT6AQ92794 2004 aa11.33□□□□□ -0.6
SPG11-212ENST00000558790 ARIH2O95376 493 aa11.33□□□□□ -0.6
SPG11-212ENST00000558790 FGRP09769 529 aa11.33□□□□□ -0.6
SPG11-212ENST00000558790 IQCF3P0C7M6 154 aa11.33□□□□□ -0.6
SPG11-212ENST00000558790 TOP1P11387 765 aaKnown RBP11.33□□□□□ -0.6
SPG11-212ENST00000558790 ACTN1P12814 892 aa11.33□□□□□ -0.6
SPG11-212ENST00000558790 POU3F3P20264 500 aaPredicted RBP11.33□□□□□ -0.6
SPG11-212ENST00000558790 RPS6P62753 249 aaKnown RBP11.33□□□□□ -0.6
SPG11-212ENST00000558790 TAP1Q03518 808 aa11.33□□□□□ -0.6
SPG11-212ENST00000558790 TEAD4Q15561 434 aa11.33□□□□□ -0.6
SPG11-212ENST00000558790 HERC6Q8IVU3 1022 aa11.33□□□□□ -0.6
SPG11-212ENST00000558790 SCFD2Q8WU76 684 aa11.33□□□□□ -0.6
SPG11-212ENST00000558790 ARNTL2Q8WYA1 636 aa11.33□□□□□ -0.6
SPG11-212ENST00000558790 WDR19Q8NEZ3 1342 aa11.33□□□□□ -0.6
SPG11-212ENST00000558790 PLXNA3P51805 1871 aa11.32□□□□□ -0.6
SPG11-212ENST00000558790 A0A0D9SFI3 127 aa11.32□□□□□ -0.6
SPG11-212ENST00000558790 RBAK-RBAKDNI3L0D1 243 aa11.32□□□□□ -0.6
SPG11-212ENST00000558790 NKRFO15226 690 aaKnown RBP eCLIP11.32□□□□□ -0.6
SPG11-212ENST00000558790 TXLNAP40222 546 aa11.32□□□□□ -0.6
SPG11-212ENST00000558790 ZNF543Q08ER8 600 aa11.32□□□□□ -0.6
SPG11-212ENST00000558790 BRDTQ58F21 947 aaPredicted RBP11.32□□□□□ -0.6
SPG11-212ENST00000558790 FAM227BQ96M60 508 aa11.32□□□□□ -0.6
SPG11-212ENST00000558790 CTAGE1Q96RT6 745 aa11.32□□□□□ -0.6
SPG11-212ENST00000558790 FTOQ9C0B1 505 aaKnown RBP eCLIP11.32□□□□□ -0.6
SPG11-212ENST00000558790 PTPRZ1P23471 2315 aaPredicted RBP11.32□□□□□ -0.6
SPG11-212ENST00000558790 ZMYM6O95789 1325 aa11.32□□□□□ -0.6
SPG11-212ENST00000558790 FRYLO94915 3013 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 LCHNA4D1U4 455 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 BAIAP3O94812 1187 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 MMP3P08254 477 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 SNHG28P0DPA3 235 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 TXNP10599 105 aaKnown RBP11.31□□□□□ -0.6
SPG11-212ENST00000558790 CHMP4BP1P59074 171 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 HAND2P61296 217 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 PTPN11Q06124 597 aaPredicted RBP11.31□□□□□ -0.6
SPG11-212ENST00000558790 GRB10Q13322 594 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 BFSP2Q13515 415 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 ALX1Q15699 326 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 USH1GQ495M9 461 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 TMCO2Q7Z6W1 182 aaPredicted RBP11.31□□□□□ -0.6
SPG11-212ENST00000558790 ZNF589Q86UQ0 364 aaPredicted RBP11.31□□□□□ -0.6
SPG11-212ENST00000558790 PRSS33Q8NF86 280 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 DNERQ8NFT8 737 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 PHOSPHO2Q8TCD6 241 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 GDPD5Q8WTR4 605 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 MPHOSPH6Q99547 160 aaKnown RBP11.31□□□□□ -0.6
SPG11-212ENST00000558790 CPVLQ9H3G5 476 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 TIMMDC1Q9NPL8 285 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 TCP11L1Q9NUJ3 509 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 SEPT3Q9UH03 358 aa11.31□□□□□ -0.6
SPG11-212ENST00000558790 RIF1Q5UIP0 2472 aaKnown RBP11.3□□□□□ -0.6
SPG11-212ENST00000558790 TECTAO75443 2155 aa11.3□□□□□ -0.6
SPG11-212ENST00000558790 KPNA6O60684 536 aa11.3□□□□□ -0.6
SPG11-212ENST00000558790 LPXNO60711 386 aa11.3□□□□□ -0.6
SPG11-212ENST00000558790 KRT37O76014 449 aa11.3□□□□□ -0.6
SPG11-212ENST00000558790 FGAP02671 866 aa11.3□□□□□ -0.6
SPG11-212ENST00000558790 KCNJ6P48051 423 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms