RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 UTP14CQ5TAP6 766 aaKnown RBP7.84□□□□□ -1.15
LRRC28-207ENST00000558500 SYCE2Q6PIF2 218 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 METTL7BQ6UX53 244 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 CYFIP1Q7L576 1253 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 RSPH3Q86UC2 560 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 DGKHQ86XP1 1220 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 ZNF710Q8N1W2 664 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 PI4K2BQ8TCG2 481 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 APOL5Q9BWW9 433 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 AMNQ9BXJ7 453 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 FTHL17Q9BXU8 183 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 SMOC2Q9H3U7 446 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 AGO3Q9H9G7 860 aaKnown RBP7.84□□□□□ -1.15
LRRC28-207ENST00000558500 DAXXQ9UER7 740 aaPredicted RBP7.84□□□□□ -1.15
LRRC28-207ENST00000558500 CEP250Q9BV73 2442 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 CHD8Q9HCK8 2581 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 SPATA31C2B4DYI2 1134 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 C2CD4DB7Z1M9 353 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 DHX16O60231 1041 aaKnown RBP7.83□□□□□ -1.16
LRRC28-207ENST00000558500 FGF18O76093 207 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 SCG2P13521 617 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 HOXB8P17481 243 aaPredicted RBP7.83□□□□□ -1.16
LRRC28-207ENST00000558500 GNPTABQ3T906 1256 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 ASPRV1Q53RT3 343 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 PDE12Q6L8Q7 609 aaKnown RBP7.83□□□□□ -1.16
LRRC28-207ENST00000558500 MFSD6Q6ZSS7 791 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 SAMD3Q8N6K7 520 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 PNMA1Q8ND90 353 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 RASGRP4Q8TDF6 673 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 DNAJB3Q8WWF6 145 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 CNTNAP3BQ96NU0 1288 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 INPP4AQ96PE3 977 aaPredicted RBP7.83□□□□□ -1.16
LRRC28-207ENST00000558500 ZKSCAN3Q9BRR0 538 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 CNTNAP3Q9BZ76 1288 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 MFSD1Q9H3U5 465 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 DCTPP1Q9H773 170 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 VAT1LQ9HCJ6 419 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 CDH22Q9UJ99 828 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 TELO2Q9Y4R8 837 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 PCDHB12Q9Y5F1 795 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 CDY2AQ9Y6F7 541 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 CHD6Q8TD26 2715 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 DNAH14Q0VDD8 3507 aa7.83□□□□□ -1.16
LRRC28-207ENST00000558500 ZMYM6O95789 1325 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 ATG2AQ2TAZ0 1938 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 MBLAC1A4D2B0 266 aaPredicted RBP7.82□□□□□ -1.16
LRRC28-207ENST00000558500 PPP1R11O60927 126 aaPredicted RBP7.82□□□□□ -1.16
LRRC28-207ENST00000558500 PCP11498 1178 aaKnown RBP7.82□□□□□ -1.16
LRRC28-207ENST00000558500 AOC1P19801 751 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 HAND2P61296 217 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 MRPS6P82932 125 aaKnown RBP7.82□□□□□ -1.16
LRRC28-207ENST00000558500 PPFIA1Q13136 1202 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 SEMA3FQ13275 785 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 PUM1Q14671 1186 aaKnown RBP eCLIP7.82□□□□□ -1.16
LRRC28-207ENST00000558500 ANGPT1Q15389 498 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 MARCH8Q5T0T0 291 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 CWF19L1Q69YN2 538 aaKnown RBP7.82□□□□□ -1.16
LRRC28-207ENST00000558500 LLGL2Q6P1M3 1020 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 NLRC5Q86WI3 1866 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 TBC1D10CQ8IV04 446 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 GPIHBP1Q8IV16 184 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 CCDC105Q8IYK2 499 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 KIAA2013Q8IYS2 634 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 FLCNQ8NFG4 579 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 KCNG4Q8TDN1 519 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 OTUD7AQ8TE49 926 aaPredicted RBP7.82□□□□□ -1.16
LRRC28-207ENST00000558500 ESR2Q92731 530 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 NECTIN4Q96NY8 510 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 POMKQ9H5K3 350 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 KAT14Q9H8E8 782 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 ZSWIM6Q9HCJ5 1215 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 AAASQ9NRG9 546 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 HELLSQ9NRZ9 838 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 TMEM260Q9NX78 707 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 TUBE1Q9UJT0 475 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 PADI3Q9ULW8 664 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 PCDHA1Q9Y5I3 950 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 SQORQ9Y6N5 450 aa7.82□□□□□ -1.16
LRRC28-207ENST00000558500 ZFHX4Q86UP3 3567 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 NEDD4P46934 1319 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 TRIM6-TRIM34B2RNG4 842 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 GCOM1H8Y6P7 765 aaPredicted RBP7.81□□□□□ -1.16
LRRC28-207ENST00000558500 ZBTB5O15062 677 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 FIBPO43427 364 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 PI15O43692 258 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 STAM2O75886 525 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 LMNAP02545 664 aaKnown RBP7.81□□□□□ -1.16
LRRC28-207ENST00000558500 RPLP2P05387 115 aaKnown RBP7.81□□□□□ -1.16
LRRC28-207ENST00000558500 ASGR2P07307 311 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 PARP1P09874 1014 aaKnown RBP7.81□□□□□ -1.16
LRRC28-207ENST00000558500 POLR2MP0CAP2 368 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 ARP10275 920 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 NPR3P17342 541 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 SARSP49591 514 aaKnown RBP7.81□□□□□ -1.16
LRRC28-207ENST00000558500 MRPS9P82933 396 aaKnown RBP7.81□□□□□ -1.16
LRRC28-207ENST00000558500 SP4Q02446 784 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 ITIH3Q06033 890 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 APOBRQ0VD83 1088 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 PAK2Q13177 524 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 DSG2Q14126 1118 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms