RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 FTOQ9C0B1 505 aaKnown RBP eCLIP11.61□□□□□ -0.55
TPM1-212ENST00000558347 NKX2-4Q9H2Z4 354 aa11.61□□□□□ -0.55
TPM1-212ENST00000558347 SH3GLB2Q9NR46 395 aa11.61□□□□□ -0.55
TPM1-212ENST00000558347 SPTLC3Q9NUV7 552 aa11.61□□□□□ -0.55
TPM1-212ENST00000558347 GSTTP1A0A1W2PQM5 241 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 DYNC1I1O14576 645 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 TREHO43280 583 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 FOSP01100 380 aaPredicted RBP11.6□□□□□ -0.55
TPM1-212ENST00000558347 CXCL10P02778 98 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 ARP10275 920 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 ACTN1P12814 892 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 MYOGP15173 224 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 ATP2A2P16615 1042 aaKnown RBP11.6□□□□□ -0.55
TPM1-212ENST00000558347 SREBF1P36956 1147 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 TYRO3Q06418 890 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 AP3B2Q13367 1082 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 MBTPS1Q14703 1052 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 RAB30Q15771 203 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 TCTN1Q2MV58 587 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 JAKMIP3Q5VZ66 844 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 SERINC5Q86VE9 423 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 TEX2Q8IWB9 1127 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 SLC17A8Q8NDX2 589 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 SEPT1Q8WYJ6 367 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 TNMDQ9H2S6 317 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 KCNH7Q9NS40 1196 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 SETD4Q9NVD3 440 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 MSRAQ9UJ68 235 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 R3HCC1Q9Y3T6 440 aaKnown RBP11.6□□□□□ -0.55
TPM1-212ENST00000558347 TRANK1O15050 2925 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 ESYT2A0FGR8 921 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 MAFGO15525 162 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 MMP1P03956 469 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 LIG1P18858 919 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 THPOP40225 353 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 ADAM17P78536 824 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 ITGB3BPQ13352 177 aaPredicted RBP11.6□□□□□ -0.55
TPM1-212ENST00000558347 CEP55Q53EZ4 464 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 MTERF4Q7Z6M4 381 aaKnown RBP11.6□□□□□ -0.55
TPM1-212ENST00000558347 FERMT3Q86UX7 667 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 PRIMPOLQ96LW4 560 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 PHF20Q9BVI0 1012 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 ZMYND12Q9H0C1 365 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 GLT8D2Q9H1C3 349 aa11.6□□□□□ -0.55
TPM1-212ENST00000558347 ZNF215Q9UL58 517 aaPredicted RBP11.6□□□□□ -0.55
TPM1-212ENST00000558347 REV3LO60673 3130 aa11.59□□□□□ -0.55
TPM1-212ENST00000558347 FOSL2P15408 326 aa11.59□□□□□ -0.55
TPM1-212ENST00000558347 U2AF2P26368 475 aaKnown RBP eCLIP11.59□□□□□ -0.554e-8■■■■■ 35.5
TPM1-212ENST00000558347 MARK3P27448 753 aa11.59□□□□□ -0.55
TPM1-212ENST00000558347 FOSBP53539 338 aa11.59□□□□□ -0.55
TPM1-212ENST00000558347 ARHGAP4P98171 946 aa11.59□□□□□ -0.55
TPM1-212ENST00000558347 GUCY1B3Q02153 619 aa11.59□□□□□ -0.55
TPM1-212ENST00000558347 CNKSR3Q6P9H4 555 aa11.59□□□□□ -0.55
TPM1-212ENST00000558347 BRAPQ7Z569 592 aa11.59□□□□□ -0.55
TPM1-212ENST00000558347 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.59□□□□□ -0.55
TPM1-212ENST00000558347 LMBR1Q8WVP7 490 aa11.59□□□□□ -0.55
TPM1-212ENST00000558347 CRYGNQ8WXF5 182 aa11.59□□□□□ -0.55
TPM1-212ENST00000558347 ZNF396Q96N95 335 aaPredicted RBP11.59□□□□□ -0.55
TPM1-212ENST00000558347 PCYT2Q99447 389 aa11.59□□□□□ -0.55
TPM1-212ENST00000558347 AGO4Q9HCK5 861 aaKnown RBP11.59□□□□□ -0.55
TPM1-212ENST00000558347 GJB4Q9NTQ9 266 aa11.59□□□□□ -0.55
TPM1-212ENST00000558347 SLC9A2Q9UBY0 812 aa11.59□□□□□ -0.55
TPM1-212ENST00000558347 PCDHA11Q9Y5I1 949 aa11.59□□□□□ -0.55
TPM1-212ENST00000558347 RSPH10B2B2RC85 870 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 FAM86B1E9PN63 330 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 MEIS1O00470 390 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 BAIAP3O94812 1187 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 PARNO95453 639 aaKnown RBP11.58□□□□□ -0.56
TPM1-212ENST00000558347 FAM86B2P0C5J1 330 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 RSPH10BP0C881 870 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 WDR5P61964 334 aaKnown RBP11.58□□□□□ -0.56
TPM1-212ENST00000558347 SAFBQ15424 915 aaKnown RBP eCLIP11.58□□□□□ -0.56
TPM1-212ENST00000558347 GALNT17Q6IS24 598 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 TMCO2Q7Z6W1 182 aaPredicted RBP11.58□□□□□ -0.56
TPM1-212ENST00000558347 MAFAQ8NHW3 353 aaPredicted RBP11.58□□□□□ -0.56
TPM1-212ENST00000558347 RASGRP4Q8TDF6 673 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 SLC9A7Q96T83 725 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 OSBPL7Q9BZF2 842 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 PDCL3Q9H2J4 239 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 FOXP1Q9H334 677 aaPredicted RBP11.58□□□□□ -0.56
TPM1-212ENST00000558347 PRDM12Q9H4Q4 367 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 SLC28A3Q9HAS3 691 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 C6orf50Q9HD87 102 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 JPH1Q9HDC5 661 aaPredicted RBP11.58□□□□□ -0.56
TPM1-212ENST00000558347 DACT1Q9NYF0 836 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 VPS54Q9P1Q0 977 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 RCOR1Q9UKL0 485 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 NFASCO94856 1347 aa11.58□□□□□ -0.56
TPM1-212ENST00000558347 VCANP13611 3396 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 IGLV3-22A0A075B6J6 115 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 UQCRHLA0A096LP55 91 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 UQCRHP07919 91 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 CYP3A4P08684 503 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 CTSHP09668 335 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 ZNF76P36508 570 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 DEFB103AP81534 67 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 NOLC1Q14978 699 aaKnown RBP eCLIP11.57□□□□□ -0.56
TPM1-212ENST00000558347 NPY5RQ15761 445 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 GLIPR1L2Q4G1C9 344 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 HERC6Q8IVU3 1022 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms