RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 M0QZ92 97 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 PER2O15055 1255 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 ZBTB5O15062 677 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 FIBPO43427 364 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 GLP2RO95838 553 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 HOXB8P17481 243 aaPredicted RBP5.99□□□□□ -1.45
SPG11-208ENST00000558155 HOXA13P31271 388 aaPredicted RBP5.99□□□□□ -1.45
SPG11-208ENST00000558155 MGAT3Q09327 533 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 DUSP6Q16828 381 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 FBXO47Q5MNV8 452 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 MCTP2Q6DN12 878 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 TMEM184AQ6ZMB5 413 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 RTN4RL1Q86UN2 441 aaPredicted RBP5.99□□□□□ -1.45
SPG11-208ENST00000558155 NLRX1Q86UT6 975 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 ADSSL1Q8N142 457 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 KREMEN2Q8NCW0 462 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 GIMAP8Q8ND71 665 aaPredicted RBP5.99□□□□□ -1.45
SPG11-208ENST00000558155 DNAJB3Q8WWF6 145 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 GPKOWQ92917 476 aaPredicted RBP eCLIP5.99□□□□□ -1.45
SPG11-208ENST00000558155 SENP7Q9BQF6 1050 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 BCAS3Q9H6U6 928 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 RTEL1Q9NZ71 1219 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 PUF60Q9UHX1 559 aaKnown RBP5.99□□□□□ -1.45
SPG11-208ENST00000558155 SORCS3Q9UPU3 1222 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 VPS9D1Q9Y2B5 631 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 PCDHB7Q9Y5E2 793 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 CDY2AQ9Y6F7 541 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 FAM186AA6NE01 2351 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 CACNA1HO95180 2353 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 KLRF2D3W0D1 207 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 OPLAHO14841 1288 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 PDGFBP01127 241 aaPredicted RBP5.98□□□□□ -1.45
SPG11-208ENST00000558155 CD52P31358 61 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 TECP42680 631 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 CLCN5P51795 746 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 MRPS6P82932 125 aaKnown RBP5.98□□□□□ -1.45
SPG11-208ENST00000558155 FOXK1P85037 733 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 PPFIA1Q13136 1202 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 MTMR3Q13615 1198 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 PAN2Q504Q3 1202 aaKnown RBP5.98□□□□□ -1.45
SPG11-208ENST00000558155 ODR4Q5SWX8 454 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 CES5AQ6NT32 575 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 ANKRD54Q6NXT1 300 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 XRRA1Q6P2D8 792 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 RUFY4Q6ZNE9 571 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 PLPP6Q8IY26 295 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 THNSL1Q8IYQ7 743 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 CRIPAKQ8N1N5 446 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 STAG2Q8N3U4 1231 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 NME8Q8N427 588 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 IL31RAQ8NI17 732 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 OTUD7AQ8TE49 926 aaPredicted RBP5.98□□□□□ -1.45
SPG11-208ENST00000558155 SEPT1Q8WYJ6 367 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 GLG1Q92896 1179 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 MTMR8Q96EF0 704 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 FAM227BQ96M60 508 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 NECTIN4Q96NY8 510 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 INPP4AQ96PE3 977 aaPredicted RBP5.98□□□□□ -1.45
SPG11-208ENST00000558155 KCNK17Q96T54 332 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 UBAC1Q9BSL1 405 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 KRT23Q9C075 422 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 S1PR5Q9H228 398 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 MFSD1Q9H3U5 465 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 SMARCAD1Q9H4L7 1026 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 AGO3Q9H9G7 860 aaKnown RBP5.98□□□□□ -1.45
SPG11-208ENST00000558155 TMEM260Q9NX78 707 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 ERAP1Q9NZ08 941 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 ZSWIM5Q9P217 1185 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 TUBE1Q9UJT0 475 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 RCAN3Q9UKA8 241 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 PADI3Q9ULW8 664 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 PLXNA3P51805 1871 aa5.98□□□□□ -1.45
SPG11-208ENST00000558155 RIF1Q5UIP0 2472 aaKnown RBP5.97□□□□□ -1.45
SPG11-208ENST00000558155 A0A0D9SFI3 127 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 PNMA6FA0A0J9YX94 578 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 MBLAC1A4D2B0 266 aaPredicted RBP5.97□□□□□ -1.45
SPG11-208ENST00000558155 PALM3A6NDB9 673 aaPredicted RBP5.97□□□□□ -1.45
SPG11-208ENST00000558155 B4E1Z4 1266 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 FGF18O76093 207 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 SCG2P13521 617 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 TCF7P36402 384 aaPredicted RBP5.97□□□□□ -1.45
SPG11-208ENST00000558155 SARSP49591 514 aaKnown RBP5.97□□□□□ -1.45
SPG11-208ENST00000558155 ERVFC1P60507 584 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 MRPS9P82933 396 aaKnown RBP5.97□□□□□ -1.45
SPG11-208ENST00000558155 SP4Q02446 784 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 KRT17Q04695 432 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 ITIH3Q06033 890 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 PAK2Q13177 524 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 NMIQ13287 307 aaPredicted RBP5.97□□□□□ -1.45
SPG11-208ENST00000558155 BMS1Q14692 1282 aaKnown RBP5.97□□□□□ -1.45
SPG11-208ENST00000558155 GRIK4Q16099 956 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 TPRNQ4KMQ1 711 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 IFIT1BQ5T764 474 aaKnown RBP5.97□□□□□ -1.45
SPG11-208ENST00000558155 C20orf194Q5TEA3 1177 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 ANKRD45Q5TZF3 282 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 FRMD5Q7Z6J6 570 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 TRIM50Q86XT4 487 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 TBC1D10CQ8IV04 446 aa5.97□□□□□ -1.45
SPG11-208ENST00000558155 ENAHQ8N8S7 591 aaPredicted RBP5.97□□□□□ -1.45
SPG11-208ENST00000558155 TMEM105Q8N8V8 129 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms