RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 SLC12A3P55017 1021 aa18.8■□□□□ 0.6
SNX1-203ENST00000558040 TMEM63BQ5T3F8 832 aa18.8■□□□□ 0.6
SNX1-203ENST00000558040 GJC2Q5T442 439 aaPredicted RBP18.8■□□□□ 0.6
SNX1-203ENST00000558040 TLK2Q86UE8 772 aa18.8■□□□□ 0.6
SNX1-203ENST00000558040 GPBP1Q86WP2 473 aa18.8■□□□□ 0.6
SNX1-203ENST00000558040 CCDC47Q96A33 483 aaKnown RBP18.8■□□□□ 0.6
SNX1-203ENST00000558040 GSDMAQ96QA5 445 aa18.8■□□□□ 0.6
SNX1-203ENST00000558040 TRIM9Q9C026 710 aa18.8■□□□□ 0.6
SNX1-203ENST00000558040 AP5M1Q9H0R1 490 aa18.8■□□□□ 0.6
SNX1-203ENST00000558040 RMND1Q9NWS8 449 aa18.8■□□□□ 0.6
SNX1-203ENST00000558040 KCND2Q9NZV8 630 aa18.8■□□□□ 0.6
SNX1-203ENST00000558040 TUBE1Q9UJT0 475 aa18.8■□□□□ 0.6
SNX1-203ENST00000558040 GNEQ9Y223 722 aaKnown RBP18.8■□□□□ 0.6
SNX1-203ENST00000558040 TELO2Q9Y4R8 837 aa18.8■□□□□ 0.6
SNX1-203ENST00000558040 TRIM17Q9Y577 477 aa18.8■□□□□ 0.6
SNX1-203ENST00000558040 PCDHA5Q9Y5H7 936 aa18.8■□□□□ 0.6
SNX1-203ENST00000558040 KRT18P05783 430 aaKnown RBP18.79■□□□□ 0.6
SNX1-203ENST00000558040 ELNP15502 786 aa18.79■□□□□ 0.6
SNX1-203ENST00000558040 SLC26A2P50443 739 aa18.79■□□□□ 0.6
SNX1-203ENST00000558040 ASIC1P78348 528 aa18.79■□□□□ 0.6
SNX1-203ENST00000558040 PRKCEQ02156 737 aa18.79■□□□□ 0.6
SNX1-203ENST00000558040 CUL4BQ13620 913 aa18.79■□□□□ 0.6
SNX1-203ENST00000558040 BRDTQ58F21 947 aaPredicted RBP18.79■□□□□ 0.6
SNX1-203ENST00000558040 XKR3Q5GH77 459 aa18.79■□□□□ 0.6
SNX1-203ENST00000558040 NT5DC1Q5TFE4 455 aa18.79■□□□□ 0.6
SNX1-203ENST00000558040 CNNM4Q6P4Q7 775 aa18.79■□□□□ 0.6
SNX1-203ENST00000558040 LRSAM1Q6UWE0 723 aa18.79■□□□□ 0.6
SNX1-203ENST00000558040 PLPPR4Q7Z2D5 763 aa18.79■□□□□ 0.6
SNX1-203ENST00000558040 TRIML1Q8N9V2 468 aa18.79■□□□□ 0.6
SNX1-203ENST00000558040 SPATA20Q8TB22 786 aa18.79■□□□□ 0.6
SNX1-203ENST00000558040 AFG1LQ8WV93 481 aa18.79■□□□□ 0.6
SNX1-203ENST00000558040 ERCC4Q92889 916 aaPredicted RBP18.79■□□□□ 0.6
SNX1-203ENST00000558040 GLG1Q92896 1179 aa18.79■□□□□ 0.6
SNX1-203ENST00000558040 FAM167AQ96KS9 214 aa18.79■□□□□ 0.6
SNX1-203ENST00000558040 BLZF1Q9H2G9 400 aa18.79■□□□□ 0.6
SNX1-203ENST00000558040 SMARCAD1Q9H4L7 1026 aa18.79■□□□□ 0.6
SNX1-203ENST00000558040 MYMKA6NI61 221 aa18.78■□□□□ 0.6
SNX1-203ENST00000558040 SEPT4O43236 478 aa18.78■□□□□ 0.6
SNX1-203ENST00000558040 DYNC1LI2O43237 492 aaPredicted RBP18.78■□□□□ 0.6
SNX1-203ENST00000558040 OATP04181 439 aa18.78■□□□□ 0.6
SNX1-203ENST00000558040 RPN1P04843 607 aaKnown RBP18.78■□□□□ 0.6
SNX1-203ENST00000558040 PRKAR2AP13861 404 aaKnown RBP18.78■□□□□ 0.6
SNX1-203ENST00000558040 CYP11B2P19099 503 aa18.78■□□□□ 0.6
SNX1-203ENST00000558040 SARSP49591 514 aaKnown RBP18.78■□□□□ 0.6
SNX1-203ENST00000558040 CACNB2Q08289 660 aaPredicted RBP18.78■□□□□ 0.6
SNX1-203ENST00000558040 STX1AQ16623 288 aa18.78■□□□□ 0.6
SNX1-203ENST00000558040 UTP14CQ5TAP6 766 aaKnown RBP18.78■□□□□ 0.6
SNX1-203ENST00000558040 TRPV1Q8NER1 839 aa18.78■□□□□ 0.6
SNX1-203ENST00000558040 DDX12PQ92771 950 aa18.78■□□□□ 0.6
SNX1-203ENST00000558040 PCYT2Q99447 389 aa18.78■□□□□ 0.6
SNX1-203ENST00000558040 A0A087WWV3 80 aa18.77■□□□□ 0.6
SNX1-203ENST00000558040 ADCY6O43306 1168 aa18.77■□□□□ 0.6
SNX1-203ENST00000558040 ZNF862O60290 1169 aa18.77■□□□□ 0.6
SNX1-203ENST00000558040 DUSP11O75319 330 aaKnown RBP18.77■□□□□ 0.6
SNX1-203ENST00000558040 PPFIA4O75335 1185 aa18.77■□□□□ 0.6
SNX1-203ENST00000558040 MMP3P08254 477 aa18.77■□□□□ 0.6
SNX1-203ENST00000558040 CASP1P29466 404 aa18.77■□□□□ 0.6
SNX1-203ENST00000558040 CNGA1P29973 690 aa18.77■□□□□ 0.6
SNX1-203ENST00000558040 RARRES1P49788 294 aa18.77■□□□□ 0.6
SNX1-203ENST00000558040 CPT1AP50416 773 aa18.77■□□□□ 0.6
SNX1-203ENST00000558040 TYRO3Q06418 890 aa18.77■□□□□ 0.6
SNX1-203ENST00000558040 DGKDQ16760 1214 aa18.77■□□□□ 0.6
SNX1-203ENST00000558040 XKR9Q5GH70 373 aa18.77■□□□□ 0.6
SNX1-203ENST00000558040 GTPBP4Q9BZE4 634 aaKnown RBP18.77■□□□□ 0.6
SNX1-203ENST00000558040 NRBP2Q9NSY0 501 aa18.77■□□□□ 0.6
SNX1-203ENST00000558040 ANO10Q9NW15 660 aa18.77■□□□□ 0.6
SNX1-203ENST00000558040 SEPT9Q9UHD8 586 aaPredicted RBP18.77■□□□□ 0.6
SNX1-203ENST00000558040 ZNF215Q9UL58 517 aaPredicted RBP18.77■□□□□ 0.6
SNX1-203ENST00000558040 PVALEFA0A1B0GWK0 134 aa18.76■□□□□ 0.59
SNX1-203ENST00000558040 ZBTB39O15060 712 aa18.76■□□□□ 0.59
SNX1-203ENST00000558040 LGALS2P05162 132 aa18.76■□□□□ 0.59
SNX1-203ENST00000558040 RARBP10826 455 aa18.76■□□□□ 0.59
SNX1-203ENST00000558040 HOXD8P13378 290 aaPredicted RBP18.76■□□□□ 0.59
SNX1-203ENST00000558040 GRK4P32298 578 aa18.76■□□□□ 0.59
SNX1-203ENST00000558040 KCNB1Q14721 858 aa18.76■□□□□ 0.59
SNX1-203ENST00000558040 MAP3K21Q5TCX8 1036 aa18.76■□□□□ 0.59
SNX1-203ENST00000558040 RINT1Q6NUQ1 792 aa18.76■□□□□ 0.59
SNX1-203ENST00000558040 DYMQ7RTS9 669 aa18.76■□□□□ 0.59
SNX1-203ENST00000558040 TSPY26PQ9H489 355 aa18.76■□□□□ 0.59
SNX1-203ENST00000558040 SPC25Q9HBM1 224 aa18.76■□□□□ 0.59
SNX1-203ENST00000558040 EXOC1Q9NV70 894 aa18.76■□□□□ 0.59
SNX1-203ENST00000558040 ERAP1Q9NZ08 941 aa18.76■□□□□ 0.59
SNX1-203ENST00000558040 MAN1B1Q9UKM7 699 aa18.76■□□□□ 0.59
SNX1-203ENST00000558040 PPME1Q9Y570 386 aa18.76■□□□□ 0.59
SNX1-203ENST00000558040 MYH9P35579 1960 aaKnown RBP18.75■□□□□ 0.59
SNX1-203ENST00000558040 WDR81Q562E7 1941 aa18.75■□□□□ 0.59
SNX1-203ENST00000558040 A6NJR5 290 aa18.75■□□□□ 0.59
SNX1-203ENST00000558040 BIN1O00499 593 aa18.75■□□□□ 0.59
SNX1-203ENST00000558040 STBD1O95210 358 aa18.75■□□□□ 0.59
SNX1-203ENST00000558040 PTGS1P23219 599 aa18.75■□□□□ 0.59
SNX1-203ENST00000558040 NLRP12P59046 1061 aa18.75■□□□□ 0.59
SNX1-203ENST00000558040 TRIM32Q13049 653 aa18.75■□□□□ 0.59
SNX1-203ENST00000558040 PADI6Q6TGC4 694 aa18.75■□□□□ 0.59
SNX1-203ENST00000558040 UNC13DQ70J99 1090 aa18.75■□□□□ 0.59
SNX1-203ENST00000558040 ANO5Q75V66 913 aa18.75■□□□□ 0.59
SNX1-203ENST00000558040 TRMT1LQ7Z2T5 733 aaKnown RBP18.75■□□□□ 0.59
SNX1-203ENST00000558040 CCDC65Q8IXS2 484 aa18.75■□□□□ 0.59
SNX1-203ENST00000558040 BBXQ8WY36 941 aaPredicted RBP18.75■□□□□ 0.59
SNX1-203ENST00000558040 CEP170P1Q96L14 293 aa18.75■□□□□ 0.59
SNX1-203ENST00000558040 FUCA2Q9BTY2 467 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms