RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 KRT17Q04695 432 aa10.96□□□□□ -0.65
PABPN1-208ENST00000557702 ZNF543Q08ER8 600 aa10.96□□□□□ -0.65
PABPN1-208ENST00000557702 XRRA1Q6P2D8 792 aa10.96□□□□□ -0.65
PABPN1-208ENST00000557702 OTOP3Q7RTS5 596 aa10.96□□□□□ -0.65
PABPN1-208ENST00000557702 TMC7Q7Z402 723 aa10.96□□□□□ -0.65
PABPN1-208ENST00000557702 KBTBD3Q8NAB2 608 aa10.96□□□□□ -0.65
PABPN1-208ENST00000557702 GPR20Q99678 358 aa10.96□□□□□ -0.65
PABPN1-208ENST00000557702 TYW1Q9NV66 732 aaKnown RBP10.96□□□□□ -0.65
PABPN1-208ENST00000557702 USP18Q9UMW8 372 aa10.96□□□□□ -0.65
PABPN1-208ENST00000557702 MRPL11Q9Y3B7 192 aaKnown RBP10.96□□□□□ -0.65
PABPN1-208ENST00000557702 SIT1Q9Y3P8 196 aa10.96□□□□□ -0.65
PABPN1-208ENST00000557702 SQORQ9Y6N5 450 aa10.96□□□□□ -0.65
PABPN1-208ENST00000557702 SPTLC1O15269 473 aa10.95□□□□□ -0.66
PABPN1-208ENST00000557702 CFHP08603 1231 aa10.95□□□□□ -0.66
PABPN1-208ENST00000557702 LAG3P18627 525 aa10.95□□□□□ -0.66
PABPN1-208ENST00000557702 SARSP49591 514 aaKnown RBP10.95□□□□□ -0.66
PABPN1-208ENST00000557702 CTDSPL2Q05D32 466 aa10.95□□□□□ -0.66
PABPN1-208ENST00000557702 IER5Q5VY09 327 aa10.95□□□□□ -0.66
PABPN1-208ENST00000557702 VSIG10LQ86VR7 867 aa10.95□□□□□ -0.66
PABPN1-208ENST00000557702 C12orf76Q8N812 135 aaPredicted RBP10.95□□□□□ -0.66
PABPN1-208ENST00000557702 MRPL43Q8N983 215 aaKnown RBP10.95□□□□□ -0.66
PABPN1-208ENST00000557702 DNAJB3Q8WWF6 145 aa10.95□□□□□ -0.66
PABPN1-208ENST00000557702 TBC1D17Q9HA65 648 aa10.95□□□□□ -0.66
PABPN1-208ENST00000557702 IGSF9Q9P2J2 1179 aa10.95□□□□□ -0.66
PABPN1-208ENST00000557702 ANGPTL2Q9UKU9 493 aa10.95□□□□□ -0.66
PABPN1-208ENST00000557702 NARSO43776 548 aaKnown RBP10.94□□□□□ -0.66
PABPN1-208ENST00000557702 CLASP2O75122 1294 aaKnown RBP10.94□□□□□ -0.66
PABPN1-208ENST00000557702 CFBP00751 764 aa10.94□□□□□ -0.66
PABPN1-208ENST00000557702 RPLP2P05387 115 aaKnown RBP10.94□□□□□ -0.66
PABPN1-208ENST00000557702 MRPS6P82932 125 aaKnown RBP10.94□□□□□ -0.66
PABPN1-208ENST00000557702 PAK2Q13177 524 aa10.94□□□□□ -0.66
PABPN1-208ENST00000557702 NEDD9Q14511 834 aa10.94□□□□□ -0.66
PABPN1-208ENST00000557702 SMC1AQ14683 1233 aaKnown RBP10.94□□□□□ -0.66
PABPN1-208ENST00000557702 NONOQ15233 471 aaKnown RBP eCLIP10.94□□□□□ -0.66
PABPN1-208ENST00000557702 CDC37Q16543 378 aaPredicted RBP10.94□□□□□ -0.66
PABPN1-208ENST00000557702 GPATCH4Q5T3I0 446 aaKnown RBP10.94□□□□□ -0.66
PABPN1-208ENST00000557702 UTP14CQ5TAP6 766 aaKnown RBP10.94□□□□□ -0.66
PABPN1-208ENST00000557702 TRIM50Q86XT4 487 aa10.94□□□□□ -0.66
PABPN1-208ENST00000557702 ATRIPQ8WXE1 791 aa10.94□□□□□ -0.66
PABPN1-208ENST00000557702 GPKOWQ92917 476 aaPredicted RBP eCLIP10.94□□□□□ -0.663e-11■□□□□ 10.3
PABPN1-208ENST00000557702 PDCD2LQ9BRP1 358 aa10.94□□□□□ -0.66
PABPN1-208ENST00000557702 UBA5Q9GZZ9 404 aa10.94□□□□□ -0.66
PABPN1-208ENST00000557702 DZANK1Q9NVP4 752 aa10.94□□□□□ -0.66
PABPN1-208ENST00000557702 DLGAP2Q9P1A6 1054 aa10.94□□□□□ -0.66
PABPN1-208ENST00000557702 PADI3Q9ULW8 664 aa10.94□□□□□ -0.66
PABPN1-208ENST00000557702 C2orf71A6NGG8 1288 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 M0QZ92 97 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 SNHG28P0DPA3 235 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 PPM1AP35813 382 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 PPFIA1Q13136 1202 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 BMS1Q14692 1282 aaKnown RBP10.93□□□□□ -0.66
PABPN1-208ENST00000557702 PGM5Q15124 567 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 ZNF528Q3MIS6 628 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 FAM102BQ5T8I3 360 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 PHLDB3Q6NSJ2 640 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 KANK3Q6NY19 840 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 METTL7BQ6UX53 244 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 CCDC149Q6ZUS6 474 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 CYFIP1Q7L576 1253 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 TMEM87AQ8NBN3 555 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 BCAS3Q9H6U6 928 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 CWH43Q9H720 699 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 TCP11L1Q9NUJ3 509 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 HCSTQ9UBK5 93 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 TUBE1Q9UJT0 475 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 CA14Q9ULX7 337 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 PCDHGA2Q9Y5H1 932 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 ASPMQ8IZT6 3477 aa10.93□□□□□ -0.66
PABPN1-208ENST00000557702 CNOT1A5YKK6 2376 aaKnown RBP10.92□□□□□ -0.66
PABPN1-208ENST00000557702 MBLAC1A4D2B0 266 aaPredicted RBP10.92□□□□□ -0.66
PABPN1-208ENST00000557702 SLC30A4O14863 429 aa10.92□□□□□ -0.66
PABPN1-208ENST00000557702 ORC4O43929 436 aa10.92□□□□□ -0.66
PABPN1-208ENST00000557702 HMMRO75330 724 aa10.92□□□□□ -0.66
PABPN1-208ENST00000557702 GOLGA8HP0CJ92 632 aa10.92□□□□□ -0.66
PABPN1-208ENST00000557702 TGM1P22735 817 aa10.92□□□□□ -0.66
PABPN1-208ENST00000557702 CCND2P30279 289 aa10.92□□□□□ -0.66
PABPN1-208ENST00000557702 CA8P35219 290 aa10.92□□□□□ -0.66
PABPN1-208ENST00000557702 FAM43BQ6ZT52 329 aaPredicted RBP10.92□□□□□ -0.66
PABPN1-208ENST00000557702 STOX1Q6ZVD7 989 aa10.92□□□□□ -0.66
PABPN1-208ENST00000557702 MAML2Q8IZL2 1156 aaPredicted RBP10.92□□□□□ -0.66
PABPN1-208ENST00000557702 NETO1Q8TDF5 533 aa10.92□□□□□ -0.66
PABPN1-208ENST00000557702 ZFP91Q96JP5 570 aaPredicted RBP10.92□□□□□ -0.66
PABPN1-208ENST00000557702 TTC14Q96N46 770 aa10.92□□□□□ -0.66
PABPN1-208ENST00000557702 CPVLQ9H3G5 476 aa10.92□□□□□ -0.66
PABPN1-208ENST00000557702 TOMM22Q9NS69 142 aa10.92□□□□□ -0.66
PABPN1-208ENST00000557702 MAP3K20Q9NYL2 800 aaKnown RBP10.92□□□□□ -0.66
PABPN1-208ENST00000557702 FBXO4Q9UKT5 387 aa10.92□□□□□ -0.66
PABPN1-208ENST00000557702 SMG5Q9UPR3 1016 aaKnown RBP10.92□□□□□ -0.66
PABPN1-208ENST00000557702 IGSF9BQ9UPX0 1349 aa10.91□□□□□ -0.66
PABPN1-208ENST00000557702 POTEMA6NI47 508 aa10.91□□□□□ -0.66
PABPN1-208ENST00000557702 SOBPA7XYQ1 873 aa10.91□□□□□ -0.66
PABPN1-208ENST00000557702 PDE4AP27815 886 aa10.91□□□□□ -0.66
PABPN1-208ENST00000557702 HSD17B4P51659 736 aa10.91□□□□□ -0.66
PABPN1-208ENST00000557702 NFX1Q12986 1120 aaKnown RBP10.91□□□□□ -0.66
PABPN1-208ENST00000557702 GRIK4Q16099 956 aa10.91□□□□□ -0.66
PABPN1-208ENST00000557702 QRICH1Q2TAL8 776 aa10.91□□□□□ -0.66
PABPN1-208ENST00000557702 GNPTABQ3T906 1256 aa10.91□□□□□ -0.66
PABPN1-208ENST00000557702 POTEGQ6S5H5 508 aa10.91□□□□□ -0.66
PABPN1-208ENST00000557702 KCNT2Q6UVM3 1135 aa10.91□□□□□ -0.66
PABPN1-208ENST00000557702 TMC5Q6UXY8 1006 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms