RNA–Protein interactions for RNA: ENST00000557140.5

NFKBIA-208, Transcript of NFKB inhibitor alpha, human

TSL 5 BASIC

Gene NFKBIA, Length 1,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKBIA-208	ENST00000557140	RALGAPA2	Q2PPJ7	1873 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	FAM86B1	E9PN63	330 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	FAM86B2	P0C5J1	330 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	POU3F3	P20264	500 aa	Predicted RBP	13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	LPIN1	Q14693	890 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	PRR16	Q569H4	304 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	MARCH8	Q5T0T0	291 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	PDXDC2P	Q6P474	469 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	CPLX2	Q6PUV4	134 aa	Known RBP	13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	TSHZ1	Q6ZSZ6	1077 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	RPAIN	Q86UA6	219 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	TOP1MT	Q969P6	601 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	ZBTB10	Q96DT7	871 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	PCYT2	Q99447	389 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	C17orf80	Q9BSJ5	609 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	SUGCT	Q9HAC7	445 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	ZNF302	Q9NR11	478 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	VPS54	Q9P1Q0	977 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	COG5	Q9UP83	839 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	GINS2	Q9Y248	185 aa		13.73	□□□□□ -0.21
NFKBIA-208	ENST00000557140	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	TNFRSF10A	O00220	468 aa		13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	IFNAR1	P17181	557 aa		13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	IBSP	P21815	317 aa	Predicted RBP	13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	PDIA3	P30101	505 aa	Known RBP	13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	NLRP5	P59047	1200 aa		13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	HTRA4	P83105	476 aa	Predicted RBP	13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	SSRP1	Q08945	709 aa	Known RBP	13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	PAK2	Q13177	524 aa		13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	STK3	Q13188	491 aa		13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	PKN1	Q16512	942 aa		13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	PTPRO	Q16827	1216 aa		13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	FBXO47	Q5MNV8	452 aa		13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	FBXL16	Q8N461	479 aa		13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	RASGRP4	Q8TDF6	673 aa		13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	HLA-C	Q95604	372 aa		13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	SAMD11	Q96NU1	681 aa		13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	UHRF1	Q96T88	793 aa	Predicted RBP	13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	UPF3B	Q9BZI7	483 aa	Known RBP	13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	TBC1D22B	Q9NU19	505 aa		13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	LMCD1	Q9NZU5	365 aa		13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	TRPV2	Q9Y5S1	764 aa		13.72	□□□□□ -0.21
NFKBIA-208	ENST00000557140	REV3L	O60673	3130 aa		13.71	□□□□□ -0.21
NFKBIA-208	ENST00000557140	EPB41L2	O43491	1005 aa	Known RBP	13.71	□□□□□ -0.22
NFKBIA-208	ENST00000557140	LPXN	O60711	386 aa		13.71	□□□□□ -0.22
NFKBIA-208	ENST00000557140	CCNE2	O96020	404 aa		13.71	□□□□□ -0.22
NFKBIA-208	ENST00000557140	CYP3A4	P08684	503 aa		13.71	□□□□□ -0.22
NFKBIA-208	ENST00000557140	CD52	P31358	61 aa		13.71	□□□□□ -0.22
NFKBIA-208	ENST00000557140	MGAT3	Q09327	533 aa		13.71	□□□□□ -0.22
NFKBIA-208	ENST00000557140	MKRN4P	Q13434	485 aa	Predicted RBP	13.71	□□□□□ -0.22
NFKBIA-208	ENST00000557140	SWSAP1	Q6NVH7	229 aa		13.71	□□□□□ -0.22
NFKBIA-208	ENST00000557140	MTHFD1L	Q6UB35	978 aa		13.71	□□□□□ -0.22
NFKBIA-208	ENST00000557140	FIBCD1	Q8N539	461 aa		13.71	□□□□□ -0.22
NFKBIA-208	ENST00000557140	ATP8B4	Q8TF62	1192 aa		13.71	□□□□□ -0.22
NFKBIA-208	ENST00000557140	IL17RA	Q96F46	866 aa		13.71	□□□□□ -0.22
NFKBIA-208	ENST00000557140	AGXT2	Q9BYV1	514 aa		13.71	□□□□□ -0.22
NFKBIA-208	ENST00000557140	PCDHA2	Q9Y5H9	948 aa		13.71	□□□□□ -0.22
NFKBIA-208	ENST00000557140	WDR81	Q562E7	1941 aa		13.71	□□□□□ -0.22
NFKBIA-208	ENST00000557140	BRWD1	Q9NSI6	2320 aa		13.7	□□□□□ -0.22
NFKBIA-208	ENST00000557140	IGLV3-22	A0A075B6J6	115 aa		13.7	□□□□□ -0.22
NFKBIA-208	ENST00000557140	HBP1	O60381	514 aa		13.7	□□□□□ -0.22
NFKBIA-208	ENST00000557140	PSAP	P07602	524 aa		13.7	□□□□□ -0.22
NFKBIA-208	ENST00000557140	CTNNB1	P35222	781 aa		13.7	□□□□□ -0.22
NFKBIA-208	ENST00000557140	KCNQ1	P51787	676 aa		13.7	□□□□□ -0.22
NFKBIA-208	ENST00000557140	KRT76	Q01546	638 aa		13.7	□□□□□ -0.22
NFKBIA-208	ENST00000557140	EPC2	Q52LR7	807 aa		13.7	□□□□□ -0.22
NFKBIA-208	ENST00000557140	ABHD15	Q6UXT9	468 aa		13.7	□□□□□ -0.22
NFKBIA-208	ENST00000557140	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.7	□□□□□ -0.22
NFKBIA-208	ENST00000557140	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.7	□□□□□ -0.22
NFKBIA-208	ENST00000557140	SP7	Q8TDD2	431 aa	Predicted RBP	13.7	□□□□□ -0.22
NFKBIA-208	ENST00000557140	LARP6	Q9BRS8	491 aa	Known RBP	13.7	□□□□□ -0.22
NFKBIA-208	ENST00000557140	FTHL17	Q9BXU8	183 aa		13.7	□□□□□ -0.22
NFKBIA-208	ENST00000557140	ZSWIM6	Q9HCJ5	1215 aa		13.7	□□□□□ -0.22
NFKBIA-208	ENST00000557140	SH3GLB2	Q9NR46	395 aa		13.7	□□□□□ -0.22
NFKBIA-208	ENST00000557140	PDRG1	Q9NUG6	133 aa		13.7	□□□□□ -0.22
NFKBIA-208	ENST00000557140	SMIM35	A0A1B0GVV1	85 aa		13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	ATG7	O95352	703 aa		13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	DEXI	O95424	95 aa		13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	COL1A2	P08123	1366 aa		13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	KLRC1	P26715	233 aa		13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	NFX1	Q12986	1120 aa	Known RBP	13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	GPM6B	Q13491	265 aa		13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	TOB2	Q14106	344 aa	Predicted RBP	13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	NTRK3	Q16288	839 aa		13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	ZNF484	Q5JVG2	852 aa		13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	EP400NL	Q6ZTU2	488 aa		13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	ADGRA3	Q8IWK6	1321 aa		13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	TMEM192	Q8IY95	271 aa		13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	NME8	Q8N427	588 aa		13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	METTL13	Q8N6R0	699 aa		13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	PPP1R16B	Q96T49	567 aa		13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	CELF4	Q9BZC1	486 aa	Known RBP	13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	LRFN2	Q9ULH4	789 aa		13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	PCDHA10	Q9Y5I2	948 aa		13.69	□□□□□ -0.22
NFKBIA-208	ENST00000557140	TTC3	P53804	2025 aa		13.68	□□□□□ -0.22
NFKBIA-208	ENST00000557140	COL4A6	Q14031	1691 aa		13.68	□□□□□ -0.22
NFKBIA-208	ENST00000557140	ADAMTS3	O15072	1205 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms