RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 MROH5Q6ZUA9 1318 aa5.9□□□□□ -1.47
SCFD1-223ENST00000557076 ATRNL1Q5VV63 1379 aa5.9□□□□□ -1.47
SCFD1-223ENST00000557076 CACNA1AO00555 2505 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 WDFY4Q6ZS81 3184 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 KIAA0355O15063 1070 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 PDE8BO95263 885 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 HOXC6P09630 235 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 ITGB8P26012 769 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 EPHB4P54760 987 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 IKZF1Q13422 519 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 CCL14Q16627 93 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 EPHA10Q5JZY3 1008 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 PI16Q6UXB8 463 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 G2E3Q7L622 706 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 PLEKHH3Q7Z736 793 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 ZSWIM9Q86XI8 627 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 CCAR1Q8IX12 1150 aaKnown RBP5.89□□□□□ -1.47
SCFD1-223ENST00000557076 CCDC146Q8IYE0 955 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 KCT2Q8NC54 265 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 HEXIM2Q96MH2 286 aaKnown RBP5.89□□□□□ -1.47
SCFD1-223ENST00000557076 APBA2Q99767 749 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 PUS3Q9BZE2 481 aaKnown RBP5.89□□□□□ -1.47
SCFD1-223ENST00000557076 OSBPL5Q9H0X9 879 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-223ENST00000557076 CBX8Q9HC52 389 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 TXNRD2Q9NNW7 524 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 PRDM5Q9NQX1 630 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-223ENST00000557076 PDLIM7Q9NR12 457 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 ECM29Q5VYK3 1845 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 UTYO14607 1347 aa5.89□□□□□ -1.47
SCFD1-223ENST00000557076 PTPRZ1P23471 2315 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-223ENST00000557076 CFAP54Q96N23 3096 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 DDTLA6NHG4 134 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-223ENST00000557076 LRRC10BA6NIK2 292 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 SLC15A5A6NIM6 579 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 C19orf81C9J6K1 198 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 FANCGO15287 622 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 GLRX3O76003 335 aaKnown RBP5.88□□□□□ -1.47
SCFD1-223ENST00000557076 RGS3P49796 1198 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 MRE11P49959 708 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 CLCN7P51798 805 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 HMGCS2P54868 508 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 HERVK_113P62684 666 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 IRX3P78415 501 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-223ENST00000557076 ATP2B2Q01814 1243 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 TLE2Q04725 743 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 CCDC85BQ15834 202 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-223ENST00000557076 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 TRIM60Q495X7 471 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 FBLN7Q53RD9 439 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 GJC2Q5T442 439 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-223ENST00000557076 BEND3Q5T5X7 828 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 FAM214BQ7L5A3 538 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 GPR142Q7Z601 462 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 ZSCAN29Q8IWY8 852 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-223ENST00000557076 SPACA3Q8IXA5 215 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 HERVK_113Q902F9 699 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 TOX2Q96NM4 488 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 NECAB3Q96P71 396 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-223ENST00000557076 CEP44Q9C0F1 390 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 PRDM12Q9H4Q4 367 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 KIF16BQ96L93 1317 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 MYBBP1AQ9BQG0 1328 aaKnown RBP5.88□□□□□ -1.47
SCFD1-223ENST00000557076 REV3LO60673 3130 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 MGAMO43451 1857 aa5.88□□□□□ -1.47
SCFD1-223ENST00000557076 KBTBD13C9JR72 458 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 PI4K2BG5E9Z4 385 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 SMIM22K7EJ46 135 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 ERC2O15083 957 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 LDHBP07195 334 aaKnown RBP5.87□□□□□ -1.47
SCFD1-223ENST00000557076 IFIT1P09914 478 aaKnown RBP5.87□□□□□ -1.47
SCFD1-223ENST00000557076 RAG1P15918 1043 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 POU3F3P20264 500 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-223ENST00000557076 FGFR2P21802 821 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 CNGA1P29973 690 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 GSTT1P30711 240 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 CAP2P40123 477 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 ADCYAP1R1P41586 468 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 BACE1P56817 501 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 FPGSQ05932 587 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 ZP2Q05996 745 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 MESP2Q0VG99 397 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 RALBP1Q15311 655 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 KCNMB1Q16558 191 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 PPM1JQ5JR12 505 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 RASIP1Q5U651 963 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 SCARA3Q6AZY7 606 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 NXPE4Q6UWF7 544 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 SPOCD1Q6ZMY3 1216 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 TMC7Q7Z402 723 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 VGLL2Q8N8G2 317 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 TRPV1Q8NER1 839 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 SRCIN1Q9C0H9 1055 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 PORCNQ9H237 461 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 KCNH6Q9H252 994 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.87□□□□□ -1.475e-6■■■□□ 17
SCFD1-223ENST00000557076 FLRT1Q9NZU1 646 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 DCTN4Q9UJW0 460 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 PPM1HQ9ULR3 514 aa5.87□□□□□ -1.47
SCFD1-223ENST00000557076 DDX60LQ5H9U9 1706 aaKnown RBP5.86□□□□□ -1.47
SCFD1-223ENST00000557076 SOWAHDA6NJG2 315 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms