RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 POTEBQ6S5H4 581 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 B3GNT9Q6UX72 402 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 PIK3AP1Q6ZUJ8 805 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 OTOP2Q7RTS6 562 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 DIS3L2Q8IYB7 885 aaKnown RBP12.13□□□□□ -0.47
IFT43-212ENST00000556742 ATP8B4Q8TF62 1192 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 FAM20AQ96MK3 541 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 TRPC6Q9Y210 931 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 MYO9BQ13459 2157 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 REV3LO60673 3130 aa12.13□□□□□ -0.47
IFT43-212ENST00000556742 BTBD18B2RXH4 712 aa12.12□□□□□ -0.47
IFT43-212ENST00000556742 SLC37A4O43826 429 aa12.12□□□□□ -0.47
IFT43-212ENST00000556742 CCNT1O60563 726 aaKnown RBP12.12□□□□□ -0.47
IFT43-212ENST00000556742 NBNO60934 754 aa12.12□□□□□ -0.47
IFT43-212ENST00000556742 EFCAB14O75071 495 aa12.12□□□□□ -0.47
IFT43-212ENST00000556742 MBTPS1Q14703 1052 aa12.12□□□□□ -0.47
IFT43-212ENST00000556742 SAFBQ15424 915 aaKnown RBP eCLIP12.12□□□□□ -0.47
IFT43-212ENST00000556742 EARS2Q5JPH6 523 aaKnown RBP12.12□□□□□ -0.47
IFT43-212ENST00000556742 ZNF484Q5JVG2 852 aa12.12□□□□□ -0.47
IFT43-212ENST00000556742 CNKSR3Q6P9H4 555 aa12.12□□□□□ -0.47
IFT43-212ENST00000556742 RSPH3Q86UC2 560 aa12.12□□□□□ -0.47
IFT43-212ENST00000556742 FAM184AQ8NB25 1140 aa12.12□□□□□ -0.47
IFT43-212ENST00000556742 FBXO18Q8NFZ0 1043 aa12.12□□□□□ -0.47
IFT43-212ENST00000556742 BBXQ8WY36 941 aaPredicted RBP12.12□□□□□ -0.47
IFT43-212ENST00000556742 C8orf76Q96K31 380 aa12.12□□□□□ -0.47
IFT43-212ENST00000556742 FTOQ9C0B1 505 aaKnown RBP eCLIP12.12□□□□□ -0.47
IFT43-212ENST00000556742 KCNMB3Q9NPA1 279 aa12.12□□□□□ -0.47
IFT43-212ENST00000556742 DISC1Q9NRI5 854 aa12.12□□□□□ -0.47
IFT43-212ENST00000556742 CXXC1Q9P0U4 656 aaPredicted RBP12.12□□□□□ -0.47
IFT43-212ENST00000556742 KIF3AQ9Y496 699 aa12.12□□□□□ -0.47
IFT43-212ENST00000556742 SAMM50Q9Y512 469 aa12.12□□□□□ -0.47
IFT43-212ENST00000556742 PCDHA2Q9Y5H9 948 aa12.12□□□□□ -0.47
IFT43-212ENST00000556742 SLC4A7Q9Y6M7 1214 aa12.12□□□□□ -0.47
IFT43-212ENST00000556742 NLRC5Q86WI3 1866 aa12.11□□□□□ -0.47
IFT43-212ENST00000556742 SMIM35A0A1B0GVV1 85 aa12.11□□□□□ -0.47
IFT43-212ENST00000556742 ATP4AP20648 1035 aa12.11□□□□□ -0.47
IFT43-212ENST00000556742 PPP2R5CQ13362 524 aa12.11□□□□□ -0.47
IFT43-212ENST00000556742 PHOSPHO2Q8TCD6 241 aa12.11□□□□□ -0.47
IFT43-212ENST00000556742 TMX3Q96JJ7 454 aa12.11□□□□□ -0.47
IFT43-212ENST00000556742 FAM167AQ96KS9 214 aa12.11□□□□□ -0.47
IFT43-212ENST00000556742 UIMC1Q96RL1 719 aa12.11□□□□□ -0.47
IFT43-212ENST00000556742 SLC9A7Q96T83 725 aa12.11□□□□□ -0.47
IFT43-212ENST00000556742 FOXP1Q9H334 677 aaPredicted RBP12.11□□□□□ -0.47
IFT43-212ENST00000556742 UNC45AQ9H3U1 944 aa12.11□□□□□ -0.47
IFT43-212ENST00000556742 GABBR1Q9UBS5 961 aa12.11□□□□□ -0.47
IFT43-212ENST00000556742 CEP131Q9UPN4 1083 aa12.11□□□□□ -0.47
IFT43-212ENST00000556742 ABHD14A-ACY1A0A1B0GW23 586 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 FAM205CA6NFA0 338 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 ZBBXA8MT70 800 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 ZBTB42B2RXF5 422 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 CD2BP2O95400 341 aaKnown RBP12.1□□□□□ -0.47
IFT43-212ENST00000556742 DNAJB2P25686 324 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 IGBP1P78318 339 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 MGAT3Q09327 533 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 RAB30Q15771 203 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 PLEKHG4Q58EX7 1191 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 ZNF697Q5TEC3 545 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 MTHFD1LQ6UB35 978 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 RUFY4Q6ZNE9 571 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 MIER3Q7Z3K6 550 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 CKAP2LQ8IYA6 745 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 SLFN12Q8IYM2 578 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 NME8Q8N427 588 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 DEFB123Q8N688 67 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 VAV3Q9UKW4 847 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 SQORQ9Y6N5 450 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 PRUNE2Q8WUY3 3088 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 RALGAPA2Q2PPJ7 1873 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 TTC3P53804 2025 aa12.1□□□□□ -0.47
IFT43-212ENST00000556742 CHMP2AO43633 222 aa12.09□□□□□ -0.47
IFT43-212ENST00000556742 ZNF862O60290 1169 aa12.09□□□□□ -0.47
IFT43-212ENST00000556742 BAG4O95429 457 aaKnown RBP12.09□□□□□ -0.47
IFT43-212ENST00000556742 OATP04181 439 aa12.09□□□□□ -0.47
IFT43-212ENST00000556742 ATP2A2P16615 1042 aaKnown RBP12.09□□□□□ -0.47
IFT43-212ENST00000556742 KLRC1P26715 233 aa12.09□□□□□ -0.47
IFT43-212ENST00000556742 KCNJ6P48051 423 aa12.09□□□□□ -0.47
IFT43-212ENST00000556742 ORC2Q13416 577 aaPredicted RBP12.09□□□□□ -0.47
IFT43-212ENST00000556742 IKBKEQ14164 716 aa12.09□□□□□ -0.47
IFT43-212ENST00000556742 IER5Q5VY09 327 aa12.09□□□□□ -0.47
IFT43-212ENST00000556742 FAM43BQ6ZT52 329 aaPredicted RBP12.09□□□□□ -0.47
IFT43-212ENST00000556742 DNAJB3Q8WWF6 145 aa12.09□□□□□ -0.47
IFT43-212ENST00000556742 HAS1Q92839 578 aa12.09□□□□□ -0.47
IFT43-212ENST00000556742 APBB2Q92870 758 aa12.09□□□□□ -0.47
IFT43-212ENST00000556742 GJA10Q969M2 543 aa12.09□□□□□ -0.47
IFT43-212ENST00000556742 PBX4Q9BYU1 374 aa12.09□□□□□ -0.47
IFT43-212ENST00000556742 NRBP2Q9NSY0 501 aa12.09□□□□□ -0.47
IFT43-212ENST00000556742 MTMR10Q9NXD2 777 aa12.09□□□□□ -0.47
IFT43-212ENST00000556742 KDM3AQ9Y4C1 1321 aa12.09□□□□□ -0.47
IFT43-212ENST00000556742 UNC80Q8N2C7 3258 aa12.08□□□□□ -0.47
IFT43-212ENST00000556742 COL4A6Q14031 1691 aa12.08□□□□□ -0.48
IFT43-212ENST00000556742 MAGEB2O15479 319 aa12.08□□□□□ -0.48
IFT43-212ENST00000556742 DKC1O60832 514 aaKnown RBP eCLIP12.08□□□□□ -0.48
IFT43-212ENST00000556742 CHRNA1P02708 482 aa12.08□□□□□ -0.48
IFT43-212ENST00000556742 CTSHP09668 335 aa12.08□□□□□ -0.48
IFT43-212ENST00000556742 U2AF2P26368 475 aaKnown RBP eCLIP12.08□□□□□ -0.48
IFT43-212ENST00000556742 FOSBP53539 338 aa12.08□□□□□ -0.48
IFT43-212ENST00000556742 WDR5P61964 334 aaKnown RBP12.08□□□□□ -0.48
IFT43-212ENST00000556742 MRPS6P82932 125 aaKnown RBP12.08□□□□□ -0.48
IFT43-212ENST00000556742 GUCY1B3Q02153 619 aa12.08□□□□□ -0.48
IFT43-212ENST00000556742 PRKCEQ02156 737 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms