RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 NCAPD2Q15021 1401 aa6.07□□□□□ -1.44
ATXN3-243ENST00000556671 KDRP35968 1356 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 MAP3K5Q99683 1374 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 C4BP0C0L5 1744 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 OTOL1A6NHN0 477 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-243ENST00000556671 STXBP3O00186 592 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 VAMP4O75379 141 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 PPM1BO75688 479 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 GLI4P10075 376 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 CANXP27824 592 aaKnown RBP6.06□□□□□ -1.44
ATXN3-243ENST00000556671 LIMS1P48059 325 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 NASPP49321 788 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-243ENST00000556671 CASP7P55210 303 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 GRB10Q13322 594 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 NFIXQ14938 502 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 TAF7Q15545 349 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-243ENST00000556671 TARBP2Q15633 366 aaKnown RBP6.06□□□□□ -1.44
ATXN3-243ENST00000556671 NFE2L2Q16236 605 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 ZNF827Q17R98 1081 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 ADAT2Q7Z6V5 191 aaKnown RBP6.06□□□□□ -1.44
ATXN3-243ENST00000556671 SP8Q8IXZ3 490 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 ARHGEF39Q8N4T4 335 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 TP53I13Q8NBR0 393 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-243ENST00000556671 RUNDC1Q96C34 613 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 MRRFQ96E11 262 aaKnown RBP6.06□□□□□ -1.44
ATXN3-243ENST00000556671 RCC1LQ96I51 464 aaKnown RBP6.06□□□□□ -1.44
ATXN3-243ENST00000556671 THUMPD2Q9BTF0 503 aaKnown RBP6.06□□□□□ -1.44
ATXN3-243ENST00000556671 LUC7LQ9NQ29 371 aaKnown RBP6.06□□□□□ -1.44
ATXN3-243ENST00000556671 SUSD2Q9UGT4 822 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 PLA2G2DQ9UNK4 145 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 BACE2Q9Y5Z0 518 aa6.06□□□□□ -1.44
ATXN3-243ENST00000556671 KDM6AO15550 1401 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-243ENST00000556671 QSER1Q2KHR3 1735 aa6.05□□□□□ -1.44
ATXN3-243ENST00000556671 F8W031 263 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-243ENST00000556671 APAF1O14727 1248 aa6.05□□□□□ -1.44
ATXN3-243ENST00000556671 KCNQ3O43525 872 aa6.05□□□□□ -1.44
ATXN3-243ENST00000556671 FOXD2O60548 495 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-243ENST00000556671 RFC4P35249 363 aa6.05□□□□□ -1.44
ATXN3-243ENST00000556671 TMPOP42166 694 aaKnown RBP6.05□□□□□ -1.44
ATXN3-243ENST00000556671 PRR5P85299 388 aa6.05□□□□□ -1.44
ATXN3-243ENST00000556671 ITPK1Q13572 414 aa6.05□□□□□ -1.44
ATXN3-243ENST00000556671 DPY19L1Q2PZI1 675 aa6.05□□□□□ -1.44
ATXN3-243ENST00000556671 LCE5AQ5TCM9 118 aa6.05□□□□□ -1.44
ATXN3-243ENST00000556671 C9orf131Q5VYM1 1079 aa6.05□□□□□ -1.44
ATXN3-243ENST00000556671 COL23A1Q86Y22 540 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-243ENST00000556671 DNAJC10Q8IXB1 793 aa6.05□□□□□ -1.44
ATXN3-243ENST00000556671 NLGN1Q8N2Q7 840 aa6.05□□□□□ -1.44
ATXN3-243ENST00000556671 NGEFQ8N5V2 710 aa6.05□□□□□ -1.44
ATXN3-243ENST00000556671 FEZF2Q8TBJ5 459 aa6.05□□□□□ -1.44
ATXN3-243ENST00000556671 KRTAP4-11Q9BYQ6 195 aa6.05□□□□□ -1.44
ATXN3-243ENST00000556671 COL5A3P25940 1745 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-243ENST00000556671 CACNA1SQ13698 1873 aa6.05□□□□□ -1.44
ATXN3-243ENST00000556671 ZC3H12DA2A288 527 aaKnown RBP6.04□□□□□ -1.44
ATXN3-243ENST00000556671 C2orf71A6NGG8 1288 aa6.04□□□□□ -1.44
ATXN3-243ENST00000556671 FFAR3O14843 346 aa6.04□□□□□ -1.44
ATXN3-243ENST00000556671 HTATSF1O43719 755 aaKnown RBP6.04□□□□□ -1.44
ATXN3-243ENST00000556671 ATF2P15336 505 aa6.04□□□□□ -1.44
ATXN3-243ENST00000556671 POLD1P28340 1107 aa6.04□□□□□ -1.44
ATXN3-243ENST00000556671 SEPHS1P49903 392 aa6.04□□□□□ -1.44
ATXN3-243ENST00000556671 AMPD2Q01433 879 aa6.04□□□□□ -1.44
ATXN3-243ENST00000556671 PPP2R5EQ16537 467 aa6.04□□□□□ -1.44
ATXN3-243ENST00000556671 ZNF790Q6PG37 636 aa6.04□□□□□ -1.44
ATXN3-243ENST00000556671 ZNF513Q8N8E2 541 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-243ENST00000556671 SEC16BQ96JE7 1060 aa6.04□□□□□ -1.44
ATXN3-243ENST00000556671 PLEKHF1Q96S99 279 aa6.04□□□□□ -1.44
ATXN3-243ENST00000556671 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
ATXN3-243ENST00000556671 RNF38Q9H0F5 515 aa6.04□□□□□ -1.44
ATXN3-243ENST00000556671 KIAA1522Q9P206 1035 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-243ENST00000556671 CCDC88AQ3V6T2 1871 aa6.04□□□□□ -1.44
ATXN3-243ENST00000556671 NUP98P52948 1817 aa6.04□□□□□ -1.44
ATXN3-243ENST00000556671 CASZ1Q86V15 1759 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 UBR2Q8IWV8 1755 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 TJP1Q07157 1748 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 STARD3NLO95772 234 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 A1BGP04217 495 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 SYN1P17600 705 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 EIF2S2P20042 333 aaKnown RBP6.03□□□□□ -1.44
ATXN3-243ENST00000556671 CRKLP46109 303 aaKnown RBP6.03□□□□□ -1.44
ATXN3-243ENST00000556671 PIP4K2AP48426 406 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-243ENST00000556671 FOXO4P98177 505 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 LMOD3Q0VAK6 560 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 VWA3BQ502W6 1294 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 KIAA1211LQ6NV74 962 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 FAM169BQ8N8A8 192 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 SYT8Q8NBV8 401 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 CXorf38Q8TB03 319 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 TSPAN17Q96FV3 270 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 ZNF496Q96IT1 587 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-243ENST00000556671 FBLN5Q9UBX5 448 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 TSPYL4Q9UJ04 414 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 DBR1Q9UK59 544 aaKnown RBP6.03□□□□□ -1.44
ATXN3-243ENST00000556671 SUGT1Q9Y2Z0 365 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 RWDD3Q9Y3V2 267 aa6.03□□□□□ -1.44
ATXN3-243ENST00000556671 N4BP2Q86UW6 1770 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-243ENST00000556671 PNPLA7Q6ZV29 1317 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 CACNA1FO60840 1977 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 AFDNP55196 1824 aaKnown RBP6.02□□□□□ -1.45
ATXN3-243ENST00000556671 CHD4Q14839 1912 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 TRBV23OR9-2A0A075B6M9 112 aa6.02□□□□□ -1.45
ATXN3-243ENST00000556671 ANKRD34BA5PLL1 514 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms