RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 SERINC5Q86VE9 423 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 BICD2Q8TD16 824 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 RASGRP4Q8TDF6 673 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 ANKRD7Q92527 254 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 DPF3Q92784 378 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 SPATA33Q96N06 139 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 TRPV6Q9H1D0 765 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 SH2B1Q9NRF2 756 aaPredicted RBP4.43□□□□□ -1.7
LINC00648-202ENST00000555985 TRMT13Q9NUP7 481 aaKnown RBP4.43□□□□□ -1.7
LINC00648-202ENST00000555985 RTEL1Q9NZ71 1219 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 OGFRQ9NZT2 677 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 VAV3Q9UKW4 847 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 ZMYND8Q9ULU4 1186 aaPredicted RBP4.43□□□□□ -1.7
LINC00648-202ENST00000555985 ATP11BQ9Y2G3 1177 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 MAFBQ9Y5Q3 323 aaPredicted RBP4.43□□□□□ -1.7
LINC00648-202ENST00000555985 UMODL1Q5DID0 1318 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 SPTBN5Q9NRC6 3674 aaKnown RBP4.43□□□□□ -1.7
LINC00648-202ENST00000555985 KIAA1671Q9BY89 1806 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 RALGAPA2Q2PPJ7 1873 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 TULP2O00295 520 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 MSH4O15457 936 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 ZNF286BP0CG31 522 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 SYN1P17600 705 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 U2AF2P26368 475 aaKnown RBP eCLIP4.43□□□□□ -1.7
LINC00648-202ENST00000555985 STK3Q13188 491 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 PTK7Q13308 1070 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 MBTPS1Q14703 1052 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 CRIPAKQ8N1N5 446 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 HAS1Q92839 578 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 BADQ92934 168 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 ZSCAN31Q96LW9 406 aaPredicted RBP4.43□□□□□ -1.7
LINC00648-202ENST00000555985 EHMT1Q9H9B1 1298 aa4.43□□□□□ -1.7
LINC00648-202ENST00000555985 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.43□□□□□ -1.7
LINC00648-202ENST00000555985 PDE4DIPQ5VU43 2346 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 CHD7Q9P2D1 2997 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 EYSQ5T1H1 3165 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 SLC37A4O43826 429 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 PQBP1O60828 265 aaKnown RBP4.42□□□□□ -1.7
LINC00648-202ENST00000555985 CAND2O75155 1236 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 MYL3P08590 195 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 SLFN14P0C7P3 912 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 SMIM10L2AP0DMW4 78 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 SMIM10L2BP0DMW5 78 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 RFC2P35250 354 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 PPP2R5CQ13362 524 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 NOLC1Q14978 699 aaKnown RBP eCLIP4.42□□□□□ -1.7
LINC00648-202ENST00000555985 KIAA0753Q2KHM9 967 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 TMEM240Q5SV17 173 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 JAKMIP3Q5VZ66 844 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 ZNF746Q6NUN9 644 aaPredicted RBP4.42□□□□□ -1.7
LINC00648-202ENST00000555985 TRIM22Q8IYM9 498 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 TDHQ8IZJ6 230 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 C4orf32Q8N8J7 132 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 HERVK_113Q902F9 699 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 TIGD1Q96MW7 591 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 MTMR9Q96QG7 549 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 RIT2Q99578 217 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 KATNAL1Q9BW62 490 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 RNPEPQ9H4A4 650 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 JPH1Q9HDC5 661 aaPredicted RBP4.42□□□□□ -1.7
LINC00648-202ENST00000555985 LMBRD1Q9NUN5 540 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 HDAC6Q9UBN7 1215 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 SLC9A2Q9UBY0 812 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 KCNJ14Q9UNX9 436 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 MYH9P35579 1960 aaKnown RBP4.42□□□□□ -1.7
LINC00648-202ENST00000555985 FAM205CA6NFA0 338 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 DCDC2CA8MYV0 355 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 H3BRB1 525 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 PPFIA3O75145 1194 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 SUPT20HL2P0C7V6 817 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 TCF7P36402 384 aaPredicted RBP4.42□□□□□ -1.7
LINC00648-202ENST00000555985 ACTR2P61160 394 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 TARBP2Q15633 366 aaKnown RBP4.42□□□□□ -1.7
LINC00648-202ENST00000555985 C9orf50Q5SZB4 431 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 FAM109BQ6ICB4 259 aaPredicted RBP4.42□□□□□ -1.7
LINC00648-202ENST00000555985 LRSAM1Q6UWE0 723 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 KRT25Q7Z3Z0 450 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 CAGE1Q8TC20 777 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 TBCKQ8TEA7 893 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 SEPT1Q8WYJ6 367 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 TUT1Q9H6E5 874 aaKnown RBP4.42□□□□□ -1.7
LINC00648-202ENST00000555985 ORC3Q9UBD5 711 aaPredicted RBP4.42□□□□□ -1.7
LINC00648-202ENST00000555985 COL1A2P08123 1366 aa4.42□□□□□ -1.7
LINC00648-202ENST00000555985 KIF28PB7ZC32 967 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 K7ELQ4 463 aaPredicted RBP4.41□□□□□ -1.7
LINC00648-202ENST00000555985 IPO5O00410 1097 aaKnown RBP4.41□□□□□ -1.7
LINC00648-202ENST00000555985 TBX3O15119 743 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 NBNO60934 754 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 DTNBO60941 627 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 TDP2O95551 362 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 PTMAP06454 111 aaKnown RBP4.41□□□□□ -1.7
LINC00648-202ENST00000555985 IQCF3P0C7M6 154 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 CKBP12277 381 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 ZNF200P98182 395 aaPredicted RBP4.41□□□□□ -1.7
LINC00648-202ENST00000555985 NR5A1Q13285 461 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 PLCB4Q15147 1175 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 SHHQ15465 462 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 KRT40Q6A162 431 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 MCTP1Q6DN14 999 aa4.41□□□□□ -1.7
LINC00648-202ENST00000555985 TRIM50Q86XT4 487 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms