RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 FOXD4L4Q8WXT5 416 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-215ENST00000555616 FOXP1Q9H334 677 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-215ENST00000555616 ZNF576Q9H609 170 aa10.88□□□□□ -0.67
ACTN1-215ENST00000555616 TBC1D22BQ9NU19 505 aa10.88□□□□□ -0.67
ACTN1-215ENST00000555616 MSRAQ9UJ68 235 aa10.88□□□□□ -0.67
ACTN1-215ENST00000555616 TUBE1Q9UJT0 475 aa10.88□□□□□ -0.67
ACTN1-215ENST00000555616 CHD7Q9P2D1 2997 aa10.88□□□□□ -0.67
ACTN1-215ENST00000555616 ABHD14A-ACY1A0A1B0GW23 586 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 RRN3P2A6NIE6 340 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 DDX39AO00148 427 aaKnown RBP10.87□□□□□ -0.67
ACTN1-215ENST00000555616 RPLP2P05387 115 aaKnown RBP10.87□□□□□ -0.67
ACTN1-215ENST00000555616 CTSHP09668 335 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 INSRRP14616 1297 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 KCNJ6P48051 423 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 STAT5BP51692 787 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 RABGGTBP53611 331 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 KRT76Q01546 638 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 GRIN2CQ14957 1233 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 PLCB4Q15147 1175 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 PLEKHG4Q58EX7 1191 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 MIS18BP1Q6P0N0 1132 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 MOXD1Q6UVY6 613 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 RUFY4Q6ZNE9 571 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 KRT25Q7Z3Z0 450 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 FERMT3Q86UX7 667 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 HERC6Q8IVU3 1022 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 CCDC60Q8IWA6 550 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-215ENST00000555616 SMAP1Q8IYB5 467 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-215ENST00000555616 TBCKQ8TEA7 893 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 MYLIPQ8WY64 445 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 TNPO1Q92973 898 aaKnown RBP10.87□□□□□ -0.67
ACTN1-215ENST00000555616 MBOAT7Q96N66 472 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 NKX2-4Q9H2Z4 354 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 TRPC6Q9Y210 931 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 ZDHHC9Q9Y397 364 aa10.87□□□□□ -0.67
ACTN1-215ENST00000555616 IGSF9BQ9UPX0 1349 aa10.86□□□□□ -0.67
ACTN1-215ENST00000555616 CYP3A7-CYP3A51PA0A087WV96 503 aa10.86□□□□□ -0.67
ACTN1-215ENST00000555616 BACH1O14867 736 aa10.86□□□□□ -0.67
ACTN1-215ENST00000555616 MSH4O15457 936 aa10.86□□□□□ -0.67
ACTN1-215ENST00000555616 CYP3A7P24462 503 aa10.86□□□□□ -0.67
ACTN1-215ENST00000555616 U2AF2P26368 475 aaKnown RBP eCLIP10.86□□□□□ -0.67
ACTN1-215ENST00000555616 DEFB103AP81534 67 aa10.86□□□□□ -0.67
ACTN1-215ENST00000555616 MGAT3Q09327 533 aa10.86□□□□□ -0.67
ACTN1-215ENST00000555616 RESTQ13127 1097 aa10.86□□□□□ -0.67
ACTN1-215ENST00000555616 NONOQ15233 471 aaKnown RBP eCLIP10.86□□□□□ -0.67
ACTN1-215ENST00000555616 Q4G0T1 1027 aa10.86□□□□□ -0.67
ACTN1-215ENST00000555616 FAM160B1Q5W0V3 765 aa10.86□□□□□ -0.67
ACTN1-215ENST00000555616 NOSTRINQ8IVI9 506 aa10.86□□□□□ -0.67
ACTN1-215ENST00000555616 ATP8B4Q8TF62 1192 aa10.86□□□□□ -0.67
ACTN1-215ENST00000555616 SLC5A5Q92911 643 aa10.86□□□□□ -0.67
ACTN1-215ENST00000555616 RIT2Q99578 217 aa10.86□□□□□ -0.67
ACTN1-215ENST00000555616 SLC28A3Q9HAS3 691 aa10.86□□□□□ -0.67
ACTN1-215ENST00000555616 TCEAL9Q9UHQ7 104 aa10.86□□□□□ -0.67
ACTN1-215ENST00000555616 COL1A2P08123 1366 aa10.86□□□□□ -0.67
ACTN1-215ENST00000555616 COL4A6Q14031 1691 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 TET1Q8NFU7 2136 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 CCDC194A0A1B0GVG4 234 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 POTEB3A0JP26 581 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 WDR64B1ANS9 1081 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 BTBD18B2RXH4 712 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 TDP2O95551 362 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 CHRNA1P02708 482 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 CA3P07451 260 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 MYOGP15173 224 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 FOSL2P15408 326 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 IGBP1P78318 339 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 IKBKEQ14164 716 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 PPP2R2DQ66LE6 453 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 PDXDC2PQ6P474 469 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 POTEBQ6S5H4 581 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 RSPH3Q86UC2 560 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 DBF4BQ8NFT6 615 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 SEPT8Q92599 483 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 ZNF396Q96N95 335 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-215ENST00000555616 GBP4Q96PP9 640 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 OSBPL7Q9BZF2 842 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 ZNF302Q9NR11 478 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 NOL7Q9UMY1 257 aaKnown RBP10.85□□□□□ -0.67
ACTN1-215ENST00000555616 PCDHA2Q9Y5H9 948 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 PCDHA10Q9Y5I2 948 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 MAFBQ9Y5Q3 323 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-215ENST00000555616 GBF1Q92538 1859 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 TRANK1O15050 2925 aa10.85□□□□□ -0.67
ACTN1-215ENST00000555616 SIP14410 1827 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 SMIM35A0A1B0GVV1 85 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 ZBTB42B2RXF5 422 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 KIF28PB7ZC32 967 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 HBP1O60381 514 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 GAS7O60861 476 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 GJB5O95377 273 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 PSAPP07602 524 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 SFNP31947 248 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 JAK3P52333 1124 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 MRPS6P82932 125 aaKnown RBP10.84□□□□□ -0.67
ACTN1-215ENST00000555616 NR5A1Q13285 461 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 INF2Q27J81 1249 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 LRCH2Q5VUJ6 765 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 ATL3Q6DD88 541 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 SWSAP1Q6NVH7 229 aa10.84□□□□□ -0.67
ACTN1-215ENST00000555616 B3GNT9Q6UX72 402 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms