RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-215	ENST00000555382	IL31RA	Q8NI17	732 aa		10.87	□□□□□ -0.67
PRKCH-215	ENST00000555382	LENG9	Q96B70	501 aa		10.87	□□□□□ -0.67
PRKCH-215	ENST00000555382	ZNF396	Q96N95	335 aa	Predicted RBP	10.87	□□□□□ -0.67
PRKCH-215	ENST00000555382	PURB	Q96QR8	312 aa	Known RBP	10.87	□□□□□ -0.67
PRKCH-215	ENST00000555382	RIT2	Q99578	217 aa		10.87	□□□□□ -0.67
PRKCH-215	ENST00000555382	AP5M1	Q9H0R1	490 aa		10.87	□□□□□ -0.67
PRKCH-215	ENST00000555382	SUGCT	Q9HAC7	445 aa		10.87	□□□□□ -0.67
PRKCH-215	ENST00000555382	CFAP45	Q9UL16	551 aa		10.87	□□□□□ -0.67
PRKCH-215	ENST00000555382	CEP131	Q9UPN4	1083 aa		10.87	□□□□□ -0.67
PRKCH-215	ENST00000555382	ZDBF2	Q9HCK1	2354 aa		10.87	□□□□□ -0.67
PRKCH-215	ENST00000555382	NFASC	O94856	1347 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	SPTBN4	Q9H254	2564 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	COL4A6	Q14031	1691 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	FAM86B1	E9PN63	330 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	ZEB2	O60315	1214 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	YEATS4	O95619	227 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	FAM86B2	P0C5J1	330 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	SUPT20HL2	P0C7V6	817 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	IL9	P15248	144 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	NASP	P49321	788 aa	Predicted RBP	10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	FOSB	P53539	338 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	ERVK-21	P61565	698 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	RBL2	Q08999	1139 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	MTMR1	Q13613	665 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	TTC38	Q5R3I4	469 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	TMCO2	Q7Z6W1	182 aa	Predicted RBP	10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	SLFN12	Q8IYM2	578 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	C4orf32	Q8N8J7	132 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	EMID1	Q96A84	441 aa	Predicted RBP	10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	FBXL18	Q96ME1	805 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	MTMR9	Q96QG7	549 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	KCNH6	Q9H252	994 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	KCNMB3	Q9NPA1	279 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	RTEL1	Q9NZ71	1219 aa		10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	DDX25	Q9UHL0	483 aa	Known RBP	10.86	□□□□□ -0.67
PRKCH-215	ENST00000555382	FAM205C	A6NFA0	338 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	GRXCR2	A6NFK2	248 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	NEMF	O60524	1076 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	CCNT1	O60563	726 aa	Known RBP	10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	ACTN1	P12814	892 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	ZNF76	P36508	570 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	DEFB103A	P81534	67 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	ATP2C1	P98194	919 aa	Predicted RBP	10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	NEDD9	Q14511	834 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	LETM2	Q2VYF4	491 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	NBPF20	Q3BBV1	942 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	NFRKB	Q6P4R8	1299 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	EEPD1	Q7L9B9	569 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	FERMT3	Q86UX7	667 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	ETNPPL	Q8TBG4	499 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	NEK9	Q8TD19	979 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	PPP1R13L	Q8WUF5	828 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	DHX38	Q92620	1227 aa	Known RBP	10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	SLC5A5	Q92911	643 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	PGBD1	Q96JS3	809 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	SCAND2P	Q9GZW5	306 aa	Predicted RBP	10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	KCNH7	Q9NS40	1196 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	TBC1D22B	Q9NU19	505 aa		10.85	□□□□□ -0.67
PRKCH-215	ENST00000555382	CACNA1A	O00555	2505 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	LINC01553	A4QN01	128 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	C19orf67	A6NJJ6	358 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382		A6NJR5	290 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	IPO5	O00410	1097 aa	Known RBP	10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	DHX15	O43143	795 aa	Known RBP	10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	SLC26A4	O43511	780 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	GJB5	O95377	273 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	BAG4	O95429	457 aa	Known RBP	10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	TDP2	O95551	362 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	CXCL10	P02778	98 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	MYCL	P12524	364 aa	Predicted RBP	10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	KRT85	P78386	507 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	SEMA3F	Q13275	785 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	PDIA5	Q14554	519 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	SLC39A14	Q15043	492 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	PTPA	Q15257	358 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	TRAF7	Q6Q0C0	670 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	B3GNT9	Q6UX72	402 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	PLA2G4D	Q86XP0	818 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	RDM1	Q8NG50	284 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	MTG1	Q9BT17	334 aa	Predicted RBP	10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	WDR11	Q9BZH6	1224 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	AGO4	Q9HCK5	861 aa	Known RBP	10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	DDX41	Q9UJV9	622 aa	Known RBP	10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	RCOR1	Q9UKL0	485 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	PCDHB6	Q9Y5E3	794 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	STK24	Q9Y6E0	443 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	MYH9	P35579	1960 aa	Known RBP	10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	MYO7A	Q13402	2215 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	MICAL3	Q7RTP6	2002 aa		10.84	□□□□□ -0.67
PRKCH-215	ENST00000555382	WNT7A	O00755	349 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	MSH4	O15457	936 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	SLC37A4	O43826	429 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	PPP6R2	O75170	966 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	PSMD10	O75832	226 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	HOXD8	P13378	290 aa	Predicted RBP	10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	KCNA2	P16389	499 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	KCNA5	P22460	613 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	FXR2	P51116	673 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	ZP2	Q05996	745 aa		10.83	□□□□□ -0.68
PRKCH-215	ENST00000555382	PTPN11	Q06124	597 aa	Predicted RBP	10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms