RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 PDE1AP54750 535 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 RHBDL3P58872 404 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 TREML2Q5T2D2 321 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 PAOXQ6QHF9 649 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 PRRT2Q7Z6L0 340 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-231ENST00000554994 AGBL5Q8NDL9 886 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 FBLIM1Q8WUP2 373 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 SDR42E1Q8WUS8 393 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 PIK3R5Q8WYR1 880 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 GLMNQ92990 594 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 TBC1D32Q96NH3 1257 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 IDI2Q9BXS1 227 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 KRTAP4-5Q9BYR2 181 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 CERS4Q9HA82 394 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 SLC28A3Q9HAS3 691 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 MSRAQ9UJ68 235 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 ZHX2Q9Y6X8 837 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 C5orf42Q9H799 3197 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 RPAP1Q9BWH6 1393 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-231ENST00000554994 TTC41PQ6P2S7 1318 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 CHD7Q9P2D1 2997 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 SIPA1L1O43166 1804 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 TRIM75PA6NK02 468 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 DBX1A6NMT0 343 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 DNM1LO00429 736 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 CXCL11O14625 94 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 PQBP1O60828 265 aaKnown RBP5.54□□□□□ -1.52
ATXN3-231ENST00000554994 CLTBP09497 229 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 ACRP10323 421 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 ALADP13716 330 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 MYOGP15173 224 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 BRD2P25440 801 aaKnown RBP5.54□□□□□ -1.52
ATXN3-231ENST00000554994 ADD2P35612 726 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 ADCYAP1R1P41586 468 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 RABGGTBP53611 331 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 ATP2B2Q01814 1243 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 NUCB1Q02818 461 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 TCF15Q12870 199 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 HGSNATQ68CP4 663 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 FASTKD5Q7L8L6 764 aaKnown RBP5.54□□□□□ -1.52
ATXN3-231ENST00000554994 TTC6Q86TZ1 520 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 FOXP4Q8IVH2 680 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-231ENST00000554994 LCORLQ8N3X6 602 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 KBTBD3Q8NAB2 608 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 USP26Q9BXU7 913 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 OSBPL5Q9H0X9 879 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-231ENST00000554994 DHX36Q9H2U1 1008 aaKnown RBP5.54□□□□□ -1.52
ATXN3-231ENST00000554994 LRRC4CQ9HCJ2 640 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 KANSL3Q9P2N6 904 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 PI4KBQ9UBF8 816 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 DDX20Q9UHI6 824 aaKnown RBP5.54□□□□□ -1.52
ATXN3-231ENST00000554994 COG5Q9UP83 839 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 MTCH2Q9Y6C9 303 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 RLFQ13129 1914 aa5.54□□□□□ -1.52
ATXN3-231ENST00000554994 COL4A6Q14031 1691 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 COL11A1P12107 1806 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-231ENST00000554994 FLT1P17948 1338 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 CYP2D7A0A087X1C5 515 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 EPOPA6NHQ4 379 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 KBTBD13C9JR72 458 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 DCXO43602 365 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 PAPLNO95428 1278 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 ZFYP08048 801 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-231ENST00000554994 CYP2D6P10635 497 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 IL9P15248 144 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 ADMP35318 185 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 TDO2P48775 406 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 SNX17Q15036 470 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 RAB3GAP1Q15042 981 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 UBE3CQ15386 1083 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 RAB30Q15771 203 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 PKN1Q16512 942 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 CERKLQ49MI3 558 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-231ENST00000554994 SPOCD1Q6ZMY3 1216 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 C16orf59Q7L2K0 433 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 CERS3Q8IU89 383 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 FAM178BQ8IXR5 827 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 SMC5Q8IY18 1101 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 LPAR1Q92633 364 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 CHMP4CQ96CF2 233 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 EVI5LQ96CN4 794 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 PRIMPOLQ96LW4 560 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 SEC62Q99442 399 aaKnown RBP5.53□□□□□ -1.52
ATXN3-231ENST00000554994 ADAM19Q9H013 955 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 SAP130Q9H0E3 1048 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 PUS7LQ9H0K6 701 aaKnown RBP5.53□□□□□ -1.52
ATXN3-231ENST00000554994 VRTNQ9H8Y1 702 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 MKNK2Q9HBH9 465 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 CABP5Q9NP86 173 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 OSGEPQ9NPF4 335 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 TOMM22Q9NS69 142 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 BRWD1Q9NSI6 2320 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 RIF1Q5UIP0 2472 aaKnown RBP5.53□□□□□ -1.52
ATXN3-231ENST00000554994 CHD6Q8TD26 2715 aa5.53□□□□□ -1.52
ATXN3-231ENST00000554994 TCRBV5S4A2TA0A5A2 114 aa5.52□□□□□ -1.53
ATXN3-231ENST00000554994 FAM170BA6NMN3 283 aa5.52□□□□□ -1.53
ATXN3-231ENST00000554994 M0R2C6 588 aa5.52□□□□□ -1.53
ATXN3-231ENST00000554994 CTNND1O60716 968 aaKnown RBP5.52□□□□□ -1.53
ATXN3-231ENST00000554994 KIF4AO95239 1232 aa5.52□□□□□ -1.53
ATXN3-231ENST00000554994 DRD2P14416 443 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms