RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 TRIP12Q14669 1992 aaPredicted RBP13.94□□□□□ -0.18
SYNE2-214ENST00000554928 NRCAMQ92823 1304 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 MBLAC1A4D2B0 266 aaPredicted RBP13.93□□□□□ -0.18
SYNE2-214ENST00000554928 NEMFO60524 1076 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 NBNO60934 754 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 CTSHP09668 335 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 THPOP40225 353 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 RBL2Q08999 1139 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 PPP2R5CQ13362 524 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 PPIGQ13427 754 aaKnown RBP eCLIP13.93□□□□□ -0.18
SYNE2-214ENST00000554928 BFSP2Q13515 415 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 CALCRLQ16602 461 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 TTC38Q5R3I4 469 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 LARP1BQ659C4 914 aaKnown RBP13.93□□□□□ -0.18
SYNE2-214ENST00000554928 MCTP1Q6DN14 999 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 ZNF365Q70YC5 407 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 LRRC8DQ7L1W4 858 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 BANK1Q8NDB2 785 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 ATP8B4Q8TF62 1192 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 FAM20AQ96MK3 541 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 SH2D3AQ9BRG2 576 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 IL23AQ9NPF7 189 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 PCDHB6Q9Y5E3 794 aa13.93□□□□□ -0.18
SYNE2-214ENST00000554928 SCN5AQ14524 2016 aa13.92□□□□□ -0.18
SYNE2-214ENST00000554928 TBX3O15119 743 aa13.92□□□□□ -0.18
SYNE2-214ENST00000554928 SELPP16109 830 aa13.92□□□□□ -0.18
SYNE2-214ENST00000554928 TXKP42681 527 aa13.92□□□□□ -0.18
SYNE2-214ENST00000554928 JAK3P52333 1124 aa13.92□□□□□ -0.18
SYNE2-214ENST00000554928 PRKCEQ02156 737 aa13.92□□□□□ -0.18
SYNE2-214ENST00000554928 GNL2Q13823 731 aaKnown RBP13.92□□□□□ -0.18
SYNE2-214ENST00000554928 NCAPH2Q6IBW4 605 aa13.92□□□□□ -0.18
SYNE2-214ENST00000554928 FAM109BQ6ICB4 259 aaPredicted RBP13.92□□□□□ -0.18
SYNE2-214ENST00000554928 C4orf32Q8N8J7 132 aa13.92□□□□□ -0.18
SYNE2-214ENST00000554928 RETREG2Q8NC44 543 aa13.92□□□□□ -0.18
SYNE2-214ENST00000554928 CAGE1Q8TC20 777 aa13.92□□□□□ -0.18
SYNE2-214ENST00000554928 DNAJB3Q8WWF6 145 aa13.92□□□□□ -0.18
SYNE2-214ENST00000554928 LRCH3Q96II8 777 aa13.92□□□□□ -0.18
SYNE2-214ENST00000554928 NAP1L4Q99733 375 aaKnown RBP13.92□□□□□ -0.18
SYNE2-214ENST00000554928 RGL1Q9NZL6 768 aa13.92□□□□□ -0.18
SYNE2-214ENST00000554928 CXXC1Q9P0U4 656 aaPredicted RBP13.92□□□□□ -0.18
SYNE2-214ENST00000554928 TCEAL9Q9UHQ7 104 aa13.92□□□□□ -0.18
SYNE2-214ENST00000554928 TUBE1Q9UJT0 475 aa13.92□□□□□ -0.18
SYNE2-214ENST00000554928 H3BQV1 296 aa13.91□□□□□ -0.18
SYNE2-214ENST00000554928 MARCH6O60337 910 aa13.91□□□□□ -0.18
SYNE2-214ENST00000554928 HBP1O60381 514 aa13.91□□□□□ -0.18
SYNE2-214ENST00000554928 OATP04181 439 aa13.91□□□□□ -0.18
SYNE2-214ENST00000554928 SFNP31947 248 aa13.91□□□□□ -0.18
SYNE2-214ENST00000554928 FXR1P51114 621 aaKnown RBP eCLIP13.91□□□□□ -0.18
SYNE2-214ENST00000554928 MTHFD1LQ6UB35 978 aa13.91□□□□□ -0.18
SYNE2-214ENST00000554928 OTOP2Q7RTS6 562 aa13.91□□□□□ -0.18
SYNE2-214ENST00000554928 FERMT3Q86UX7 667 aa13.91□□□□□ -0.18
SYNE2-214ENST00000554928 CKAP2LQ8IYA6 745 aa13.91□□□□□ -0.18
SYNE2-214ENST00000554928 FAM49AQ9H0Q0 323 aaPredicted RBP13.91□□□□□ -0.18
SYNE2-214ENST00000554928 KIF3AQ9Y496 699 aa13.91□□□□□ -0.18
SYNE2-214ENST00000554928 LAMA2P24043 3122 aaKnown RBP13.9□□□□□ -0.18
SYNE2-214ENST00000554928 A0A087WWV3 80 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 VPS37CA5D8V6 355 aaPredicted RBP13.9□□□□□ -0.18
SYNE2-214ENST00000554928 POTEMA6NI47 508 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 ZBTB39O15060 712 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 C22orf31O95567 290 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 CHRNA1P02708 482 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 GNAT1P11488 350 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 SYT1P21579 422 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 KLRC1P26715 233 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 SLC26A2P50443 739 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 CYP4A11Q02928 519 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 MGAT3Q09327 533 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 TMEM62Q0P6H9 643 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 CTTNQ14247 550 aaKnown RBP13.9□□□□□ -0.18
SYNE2-214ENST00000554928 RASIP1Q5U651 963 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 PLA2G4FQ68DD2 849 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 ZNF579Q8NAF0 562 aaKnown RBP13.9□□□□□ -0.18
SYNE2-214ENST00000554928 SPRYD3Q8NCJ5 442 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 RDM1Q8NG50 284 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 DYDC2Q96IM9 177 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 RNPC3Q96LT9 517 aaKnown RBP13.9□□□□□ -0.18
SYNE2-214ENST00000554928 CEP89Q96ST8 783 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 TTC12Q9H892 705 aaPredicted RBP13.9□□□□□ -0.18
SYNE2-214ENST00000554928 TANC1Q9C0D5 1861 aa13.9□□□□□ -0.18
SYNE2-214ENST00000554928 A0A1W2PPC1 479 aa13.89□□□□□ -0.19
SYNE2-214ENST00000554928 RRN3P2A6NIE6 340 aa13.89□□□□□ -0.19
SYNE2-214ENST00000554928 GRXCR1A8MXD5 290 aa13.89□□□□□ -0.19
SYNE2-214ENST00000554928 RSPH10B2B2RC85 870 aa13.89□□□□□ -0.19
SYNE2-214ENST00000554928 OR52Z1P0C646 297 aa13.89□□□□□ -0.19
SYNE2-214ENST00000554928 RSPH10BP0C881 870 aa13.89□□□□□ -0.19
SYNE2-214ENST00000554928 EPHA7Q15375 998 aa13.89□□□□□ -0.19
SYNE2-214ENST00000554928 IL17AQ16552 155 aa13.89□□□□□ -0.19
SYNE2-214ENST00000554928 ZNF484Q5JVG2 852 aa13.89□□□□□ -0.19
SYNE2-214ENST00000554928 FAM173BQ6P4H8 233 aa13.89□□□□□ -0.19
SYNE2-214ENST00000554928 HSCBQ8IWL3 235 aa13.89□□□□□ -0.19
SYNE2-214ENST00000554928 SLFN12Q8IYM2 578 aa13.89□□□□□ -0.19
SYNE2-214ENST00000554928 CCDC155Q8N6L0 562 aa13.89□□□□□ -0.19
SYNE2-214ENST00000554928 TET1Q8NFU7 2136 aa13.89□□□□□ -0.19
SYNE2-214ENST00000554928 BBXQ8WY36 941 aaPredicted RBP13.89□□□□□ -0.19
SYNE2-214ENST00000554928 INTS4Q96HW7 963 aaKnown RBP13.89□□□□□ -0.19
SYNE2-214ENST00000554928 PPP1R16BQ96T49 567 aa13.89□□□□□ -0.19
SYNE2-214ENST00000554928 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.89□□□□□ -0.19
SYNE2-214ENST00000554928 NOL7Q9UMY1 257 aaKnown RBP13.89□□□□□ -0.19
SYNE2-214ENST00000554928 PCDHA12Q9UN75 941 aa13.89□□□□□ -0.19
SYNE2-214ENST00000554928 FARP1Q9Y4F1 1045 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms