RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 STAT5BP51692 787 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 KRT76Q01546 638 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 PPFIA1Q13136 1202 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 MBTPS1Q14703 1052 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 GRIK4Q16099 956 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 PRR16Q569H4 304 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 FAM26DQ5JW98 314 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 MARCH8Q5T0T0 291 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 ZNF746Q6NUN9 644 aaPredicted RBP8.54□□□□□ -1.04
LINC00640-201ENST00000554409 TAF2Q6P1X5 1199 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 MOXD1Q6UVY6 613 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 ABHD15Q6UXT9 468 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 PHOSPHO2Q8TCD6 241 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 TBCKQ8TEA7 893 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 WASF1Q92558 559 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 TNPO1Q92973 898 aaKnown RBP8.54□□□□□ -1.04
LINC00640-201ENST00000554409 TIFAQ96CG3 184 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 SLC9A7Q96T83 725 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 ZNF577Q9BSK1 485 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 FTOQ9C0B1 505 aaKnown RBP eCLIP8.54□□□□□ -1.04
LINC00640-201ENST00000554409 WDR70Q9NW82 654 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 PCDHGA4Q9Y5G9 962 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 PCDHA11Q9Y5I1 949 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 SZT2Q5T011 3432 aa8.54□□□□□ -1.04
LINC00640-201ENST00000554409 COL1A2P08123 1366 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 CYP3A7-CYP3A51PA0A087WV96 503 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 ABHD14A-ACY1A0A1B0GW23 586 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 GRXCR1A8MXD5 290 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 RSPH10B2B2RC85 870 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 RSPH10BP0C881 870 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 FDPSP14324 419 aaKnown RBP8.53□□□□□ -1.04
LINC00640-201ENST00000554409 ATP2A2P16615 1042 aaKnown RBP8.53□□□□□ -1.04
LINC00640-201ENST00000554409 CYP3A7P24462 503 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 MARK3P27448 753 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 PBX2P40425 430 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 WDR5P61964 334 aaKnown RBP8.53□□□□□ -1.04
LINC00640-201ENST00000554409 PLCB4Q15147 1175 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 NONOQ15233 471 aaKnown RBP eCLIP8.53□□□□□ -1.04
LINC00640-201ENST00000554409 Q4G0T1 1027 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 FAM160B1Q5W0V3 765 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 MIS18BP1Q6P0N0 1132 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 KRT25Q7Z3Z0 450 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 CCDC60Q8IWA6 550 aaPredicted RBP8.53□□□□□ -1.04
LINC00640-201ENST00000554409 SMAP1Q8IYB5 467 aaPredicted RBP8.53□□□□□ -1.04
LINC00640-201ENST00000554409 NSUN7Q8NE18 718 aaKnown RBP8.53□□□□□ -1.04
LINC00640-201ENST00000554409 MBOAT7Q96N66 472 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 RIT2Q99578 217 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 KIF2CQ99661 725 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 ZNF576Q9H609 170 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 ORC3Q9UBD5 711 aaPredicted RBP8.53□□□□□ -1.04
LINC00640-201ENST00000554409 MSRAQ9UJ68 235 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 TUBE1Q9UJT0 475 aa8.53□□□□□ -1.04
LINC00640-201ENST00000554409 POTEB3A0JP26 581 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 FAM205CA6NFA0 338 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 DDX39AO00148 427 aaKnown RBP8.52□□□□□ -1.05
LINC00640-201ENST00000554409 MSH4O15457 936 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 HBP1O60381 514 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 INSRRP14616 1297 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 RBM25P49756 843 aaKnown RBP8.52□□□□□ -1.05
LINC00640-201ENST00000554409 PLCB2Q00722 1185 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 MGAT3Q09327 533 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 TCTN1Q2MV58 587 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 PLEKHG4Q58EX7 1191 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 POTEBQ6S5H4 581 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 RUFY4Q6ZNE9 571 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 RSPH3Q86UC2 560 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 NECAB1Q8N987 351 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 IL27Q8NEV9 243 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 ATP8B4Q8TF62 1192 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 PTCD2Q8WV60 388 aaKnown RBP8.52□□□□□ -1.05
LINC00640-201ENST00000554409 SLC5A5Q92911 643 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 FAM161BQ96MY7 647 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 CDX2Q99626 313 aaPredicted RBP8.52□□□□□ -1.05
LINC00640-201ENST00000554409 ZNF302Q9NR11 478 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 TCEAL9Q9UHQ7 104 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 KCNJ14Q9UNX9 436 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 LIMCH1Q9UPQ0 1083 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 YBX2Q9Y2T7 364 aaKnown RBP8.52□□□□□ -1.05
LINC00640-201ENST00000554409 PCDHA10Q9Y5I2 948 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 MAFBQ9Y5Q3 323 aaPredicted RBP8.52□□□□□ -1.05
LINC00640-201ENST00000554409 COL4A6Q14031 1691 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 LOXHD1Q8IVV2 1947 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 IGSF9BQ9UPX0 1349 aa8.52□□□□□ -1.05
LINC00640-201ENST00000554409 WDR64B1ANS9 1081 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 BACH1O14867 736 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 GAS7O60861 476 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 PSMD10O75832 226 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 TDP2O95551 362 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 CHRNA1P02708 482 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 PSAPP07602 524 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 CTSHP09668 335 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 GCFC2P16383 781 aaKnown RBP8.51□□□□□ -1.05
LINC00640-201ENST00000554409 ATP4AP20648 1035 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 SFNP31947 248 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 KCNJ6P48051 423 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 RABGGTBP53611 331 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 ST3GAL1Q11201 340 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 IKBKEQ14164 716 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 INF2Q27J81 1249 aa8.51□□□□□ -1.05
LINC00640-201ENST00000554409 PPP4R3AQ6IN85 833 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms