RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 RUFY4Q6ZNE9 571 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 TSHZ1Q6ZSZ6 1077 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 RUFY3Q7L099 469 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 CYFIP1Q7L576 1253 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 ERMP1Q7Z2K6 904 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 SGMS1Q86VZ5 419 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 NPAS4Q8IUM7 802 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 STAG2Q8N3U4 1231 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 POF1BQ8WVV4 589 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 RIPOR3Q96MK2 946 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 CDCA3Q99618 268 aaPredicted RBP8.87□□□□□ -0.99
ABCD4-220ENST00000553998 FTHL17Q9BXU8 183 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 S1PR5Q9H228 398 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 RIOX1Q9H6W3 641 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 FAM86C1Q9NVL1 165 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 MAD2L2Q9UI95 211 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 ZNF215Q9UL58 517 aaPredicted RBP8.87□□□□□ -0.99
ABCD4-220ENST00000553998 BARX2Q9UMQ3 279 aaPredicted RBP8.87□□□□□ -0.99
ABCD4-220ENST00000553998 TELO2Q9Y4R8 837 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 CYP46A1Q9Y6A2 500 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 KLRF2D3W0D1 207 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 FIBPO43427 364 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 DDAH1O94760 285 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 RCAN1P53805 252 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 SLC35G1Q2M3R5 365 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 XRRA1Q6P2D8 792 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 ASCL5Q7RTU5 278 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 CATIPQ7Z7H3 387 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 RSPH3Q86UC2 560 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 TRIM50Q86XT4 487 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 VN1R2Q8NFZ6 395 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 RASGRP4Q8TDF6 673 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 TBC1D32Q96NH3 1257 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 MAP3K14Q99558 947 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 AGXT2Q9BYV1 514 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 TLE6Q9H808 572 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 AGO3Q9H9G7 860 aaKnown RBP8.86□□□□□ -0.99
ABCD4-220ENST00000553998 LY9Q9HBG7 655 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 VPS13AQ96RL7 3174 aa8.86□□□□□ -0.99
ABCD4-220ENST00000553998 RALGAPA2Q2PPJ7 1873 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 SPTBN4Q9H254 2564 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 PTPRZ1P23471 2315 aaPredicted RBP8.85□□□□□ -0.99
ABCD4-220ENST00000553998 PRR23AA6NEV1 266 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 CCDC69A6NI79 296 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 H0Y858 1186 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 FSCN2O14926 492 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 DHX16O60231 1041 aaKnown RBP8.85□□□□□ -0.99
ABCD4-220ENST00000553998 STAG3L1P0CL83 205 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 CALM1P0DP23 149 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 CALM2P0DP24 149 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 CALM3P0DP25 149 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 FGD1P98174 961 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 TROAPQ12815 778 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 COL9A3Q14050 684 aaPredicted RBP8.85□□□□□ -0.99
ABCD4-220ENST00000553998 DUSP6Q16828 381 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 PDE12Q6L8Q7 609 aaKnown RBP8.85□□□□□ -0.99
ABCD4-220ENST00000553998 SYNE3Q6ZMZ3 975 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 NFXL1Q6ZNB6 911 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 GIMAP8Q8ND71 665 aaPredicted RBP8.85□□□□□ -0.99
ABCD4-220ENST00000553998 ZFP91Q96JP5 570 aaPredicted RBP8.85□□□□□ -0.99
ABCD4-220ENST00000553998 RPGRIP1Q96KN7 1286 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 TLR9Q9NR96 1032 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 PDRG1Q9NUG6 133 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 SLC12A7Q9Y666 1083 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 CDY2AQ9Y6F7 541 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 DOCK5Q9H7D0 1870 aa8.85□□□□□ -0.99
ABCD4-220ENST00000553998 KDM3AQ9Y4C1 1321 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 PNMA6FA0A0J9YX94 578 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 GSTTP1A0A1W2PQM5 241 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 CD52P31358 61 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 KIF5BP33176 963 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 TCF7P36402 384 aaPredicted RBP8.84□□□□□ -0.99
ABCD4-220ENST00000553998 EVCP57679 992 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 MRPS6P82932 125 aaKnown RBP8.84□□□□□ -0.99
ABCD4-220ENST00000553998 PPFIA1Q13136 1202 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 RABEP1Q15276 862 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 ANKRD1Q15327 319 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 GRIK4Q16099 956 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 UTP14CQ5TAP6 766 aaKnown RBP8.84□□□□□ -0.99
ABCD4-220ENST00000553998 IER5Q5VY09 327 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 PCNX4Q63HM2 1172 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 SYCE2Q6PIF2 218 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 RBM23Q86U06 439 aaKnown RBP8.84□□□□□ -0.99
ABCD4-220ENST00000553998 FCHSD1Q86WN1 690 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 UBALD2Q8IYN6 164 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 ZNF654Q8IZM8 581 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 DNAJB3Q8WWF6 145 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 SEPT1Q8WYJ6 367 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 PIGSQ96S52 555 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 LRRC2Q9BYS8 371 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 ERAP1Q9NZ08 941 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 RTEL1Q9NZ71 1219 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 TUBE1Q9UJT0 475 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 PADI3Q9ULW8 664 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 TRPC6Q9Y210 931 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 LZTS1Q9Y250 596 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 CACNA1AO00555 2505 aa8.84□□□□□ -0.99
ABCD4-220ENST00000553998 RIF1Q5UIP0 2472 aaKnown RBP8.83□□□□□ -1
ABCD4-220ENST00000553998 IGSF9BQ9UPX0 1349 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 RRN3P2A6NIE6 340 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms