RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 FTOQ9C0B1 505 aaKnown RBP eCLIP26.21■■□□□ 1.79
NEK9-203ENST00000553945 MBLAC1A4D2B0 266 aaPredicted RBP26.2■■□□□ 1.78
NEK9-203ENST00000553945 PFKMP08237 780 aa26.2■■□□□ 1.78
NEK9-203ENST00000553945 U2AF2P26368 475 aaKnown RBP eCLIP26.2■■□□□ 1.78
NEK9-203ENST00000553945 MCM7P33993 719 aa26.2■■□□□ 1.78
NEK9-203ENST00000553945 FXR1P51114 621 aaKnown RBP eCLIP26.2■■□□□ 1.78
NEK9-203ENST00000553945 PPP2R5CQ13362 524 aa26.2■■□□□ 1.78
NEK9-203ENST00000553945 UGCGQ16739 394 aa26.2■■□□□ 1.78
NEK9-203ENST00000553945 LRIT3Q3SXY7 679 aa26.2■■□□□ 1.78
NEK9-203ENST00000553945 VWCEQ96DN2 955 aa26.2■■□□□ 1.78
NEK9-203ENST00000553945 NOL7Q9UMY1 257 aaKnown RBP26.2■■□□□ 1.78
NEK9-203ENST00000553945 LAMA3Q16787 3333 aa26.2■■□□□ 1.78
NEK9-203ENST00000553945 K7ELQ4 463 aaPredicted RBP26.19■■□□□ 1.78
NEK9-203ENST00000553945 EML1O00423 815 aa26.19■■□□□ 1.78
NEK9-203ENST00000553945 CTSHP09668 335 aa26.19■■□□□ 1.78
NEK9-203ENST00000553945 ZNF484Q5JVG2 852 aa26.19■■□□□ 1.78
NEK9-203ENST00000553945 TAF2Q6P1X5 1199 aa26.19■■□□□ 1.78
NEK9-203ENST00000553945 TRAF7Q6Q0C0 670 aa26.19■■□□□ 1.78
NEK9-203ENST00000553945 OTOP2Q7RTS6 562 aa26.19■■□□□ 1.78
NEK9-203ENST00000553945 BBXQ8WY36 941 aaPredicted RBP26.19■■□□□ 1.78
NEK9-203ENST00000553945 RSPH10B2B2RC85 870 aa26.18■■□□□ 1.78
NEK9-203ENST00000553945 SOX1O00570 391 aaPredicted RBP26.18■■□□□ 1.78
NEK9-203ENST00000553945 ZNF862O60290 1169 aa26.18■■□□□ 1.78
NEK9-203ENST00000553945 PARNO95453 639 aaKnown RBP26.18■■□□□ 1.78
NEK9-203ENST00000553945 RSPH10BP0C881 870 aa26.18■■□□□ 1.78
NEK9-203ENST00000553945 PRKCEQ02156 737 aa26.18■■□□□ 1.78
NEK9-203ENST00000553945 ZNF174Q15697 407 aa26.18■■□□□ 1.78
NEK9-203ENST00000553945 TTC38Q5R3I4 469 aa26.18■■□□□ 1.78
NEK9-203ENST00000553945 LARP1BQ659C4 914 aaKnown RBP26.18■■□□□ 1.78
NEK9-203ENST00000553945 NCAPH2Q6IBW4 605 aa26.18■■□□□ 1.78
NEK9-203ENST00000553945 FAM167AQ96KS9 214 aa26.18■■□□□ 1.78
NEK9-203ENST00000553945 COL1A2P08123 1366 aa26.18■■□□□ 1.78
NEK9-203ENST00000553945 CAND2O75155 1236 aa26.17■■□□□ 1.78
NEK9-203ENST00000553945 OATP04181 439 aa26.17■■□□□ 1.78
NEK9-203ENST00000553945 KLRC1P26715 233 aa26.17■■□□□ 1.78
NEK9-203ENST00000553945 TXKP42681 527 aa26.17■■□□□ 1.78
NEK9-203ENST00000553945 GPNMBQ14956 572 aa26.17■■□□□ 1.78
NEK9-203ENST00000553945 RSPH3Q86UC2 560 aa26.17■■□□□ 1.78
NEK9-203ENST00000553945 BANK1Q8NDB2 785 aa26.17■■□□□ 1.78
NEK9-203ENST00000553945 DNAJB3Q8WWF6 145 aa26.17■■□□□ 1.78
NEK9-203ENST00000553945 HERVK_113Q902F9 699 aa26.17■■□□□ 1.78
NEK9-203ENST00000553945 SNX21Q969T3 373 aa26.17■■□□□ 1.78
NEK9-203ENST00000553945 FAM49AQ9H0Q0 323 aaPredicted RBP26.17■■□□□ 1.78
NEK9-203ENST00000553945 TMEM60Q9H2L4 133 aa26.17■■□□□ 1.78
NEK9-203ENST00000553945 NRBP2Q9NSY0 501 aa26.17■■□□□ 1.78
NEK9-203ENST00000553945 PCDHA12Q9UN75 941 aa26.17■■□□□ 1.78
NEK9-203ENST00000553945 PCDHA2Q9Y5H9 948 aa26.17■■□□□ 1.78
NEK9-203ENST00000553945 NBNO60934 754 aa26.16■■□□□ 1.78
NEK9-203ENST00000553945 TRAPPC10P48553 1259 aa26.16■■□□□ 1.78
NEK9-203ENST00000553945 MTHFD1LQ6UB35 978 aa26.16■■□□□ 1.78
NEK9-203ENST00000553945 LRCH3Q96II8 777 aa26.16■■□□□ 1.78
NEK9-203ENST00000553945 MTMR9Q96QG7 549 aa26.16■■□□□ 1.78
NEK9-203ENST00000553945 MTIF3Q9H2K0 278 aaKnown RBP26.16■■□□□ 1.78
NEK9-203ENST00000553945 ZBTB42B2RXF5 422 aa26.15■■□□□ 1.78
NEK9-203ENST00000553945 ACTN1P12814 892 aa26.15■■□□□ 1.78
NEK9-203ENST00000553945 MBTPS1Q14703 1052 aa26.15■■□□□ 1.78
NEK9-203ENST00000553945 RPAINQ86UA6 219 aa26.15■■□□□ 1.78
NEK9-203ENST00000553945 TTC12Q9H892 705 aaPredicted RBP26.15■■□□□ 1.78
NEK9-203ENST00000553945 FOXD4L1Q9NU39 408 aa26.15■■□□□ 1.78
NEK9-203ENST00000553945 CEP131Q9UPN4 1083 aa26.15■■□□□ 1.78
NEK9-203ENST00000553945 ZBBXA8MT70 800 aa26.14■■□□□ 1.78
NEK9-203ENST00000553945 SPIRE1Q08AE8 756 aa26.14■■□□□ 1.78
NEK9-203ENST00000553945 ORC2Q13416 577 aaPredicted RBP26.14■■□□□ 1.78
NEK9-203ENST00000553945 NBR1Q14596 966 aa26.14■■□□□ 1.78
NEK9-203ENST00000553945 EPHA7Q15375 998 aa26.14■■□□□ 1.78
NEK9-203ENST00000553945 HSCBQ8IWL3 235 aa26.14■■□□□ 1.78
NEK9-203ENST00000553945 CXXC1Q9P0U4 656 aaPredicted RBP26.14■■□□□ 1.78
NEK9-203ENST00000553945 SEPT9Q9UHD8 586 aaPredicted RBP26.14■■□□□ 1.78
NEK9-203ENST00000553945 RBAK-RBAKDNI3L0D1 243 aa26.13■■□□□ 1.77
NEK9-203ENST00000553945 CXCL10P02778 98 aa26.13■■□□□ 1.77
NEK9-203ENST00000553945 QARSP47897 775 aaKnown RBP26.13■■□□□ 1.77
NEK9-203ENST00000553945 TOB1P50616 345 aaPredicted RBP26.13■■□□□ 1.77
NEK9-203ENST00000553945 PSMC5P62195 406 aa26.13■■□□□ 1.77
NEK9-203ENST00000553945 FAM26DQ5JW98 314 aa26.13■■□□□ 1.77
NEK9-203ENST00000553945 RASIP1Q5U651 963 aa26.13■■□□□ 1.77
NEK9-203ENST00000553945 INTS4Q96HW7 963 aaKnown RBP26.13■■□□□ 1.77
NEK9-203ENST00000553945 SMIM35A0A1B0GVV1 85 aa26.12■■□□□ 1.77
NEK9-203ENST00000553945 DDX11L8A8MPP1 907 aa26.12■■□□□ 1.77
NEK9-203ENST00000553945 C22orf31O95567 290 aa26.12■■□□□ 1.77
NEK9-203ENST00000553945 CHRNA1P02708 482 aa26.12■■□□□ 1.77
NEK9-203ENST00000553945 RPLP2P05387 115 aaKnown RBP26.12■■□□□ 1.77
NEK9-203ENST00000553945 P4HBP07237 508 aaKnown RBP26.12■■□□□ 1.77
NEK9-203ENST00000553945 OR52Z1P0C646 297 aa26.12■■□□□ 1.77
NEK9-203ENST00000553945 XKR3Q5GH77 459 aa26.12■■□□□ 1.77
NEK9-203ENST00000553945 TET1Q8NFU7 2136 aa26.12■■□□□ 1.77
NEK9-203ENST00000553945 VPS37CA5D8V6 355 aaPredicted RBP26.11■■□□□ 1.77
NEK9-203ENST00000553945 DKC1O60832 514 aaKnown RBP eCLIP26.11■■□□□ 1.77
NEK9-203ENST00000553945 PDCP20941 246 aa26.11■■□□□ 1.77
NEK9-203ENST00000553945 MRPS6P82932 125 aaKnown RBP26.11■■□□□ 1.77
NEK9-203ENST00000553945 TMEM62Q0P6H9 643 aa26.11■■□□□ 1.77
NEK9-203ENST00000553945 CNKSR3Q6P9H4 555 aa26.11■■□□□ 1.77
NEK9-203ENST00000553945 DYDC2Q96IM9 177 aa26.11■■□□□ 1.77
NEK9-203ENST00000553945 RGL1Q9NZL6 768 aa26.11■■□□□ 1.77
NEK9-203ENST00000553945 PCDHB6Q9Y5E3 794 aa26.11■■□□□ 1.77
NEK9-203ENST00000553945 CDY2AQ9Y6F7 541 aa26.11■■□□□ 1.77
NEK9-203ENST00000553945 SLC4A7Q9Y6M7 1214 aa26.11■■□□□ 1.77
NEK9-203ENST00000553945 TMEM150BA6NC51 233 aa26.1■■□□□ 1.77
NEK9-203ENST00000553945 STBD1O95210 358 aa26.1■■□□□ 1.77
NEK9-203ENST00000553945 CYP4A11Q02928 519 aa26.1■■□□□ 1.77
NEK9-203ENST00000553945 MGAT3Q09327 533 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms