RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 RIOX1Q9H6W3 641 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 VAT1LQ9HCJ6 419 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 ZSWIM5Q9P217 1185 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 PADI3Q9ULW8 664 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 SORCS3Q9UPU3 1222 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 FANCMQ8IYD8 2048 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 KDM3AQ9Y4C1 1321 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 CHD8Q9HCK8 2581 aa10.51□□□□□ -0.73
PRKCH-208ENST00000553846 B4E1Z4 1266 aa10.5□□□□□ -0.73
PRKCH-208ENST00000553846 C2CD4DB7Z1M9 353 aa10.5□□□□□ -0.73
PRKCH-208ENST00000553846 KLRF2D3W0D1 207 aa10.5□□□□□ -0.73
PRKCH-208ENST00000553846 GCOM1H8Y6P7 765 aaPredicted RBP10.5□□□□□ -0.73
PRKCH-208ENST00000553846 FGF18O76093 207 aa10.5□□□□□ -0.73
PRKCH-208ENST00000553846 POLR2MP0CAP2 368 aa10.5□□□□□ -0.73
PRKCH-208ENST00000553846 TCF7P36402 384 aaPredicted RBP10.5□□□□□ -0.73
PRKCH-208ENST00000553846 PDE1AP54750 535 aa10.5□□□□□ -0.73
PRKCH-208ENST00000553846 C1QBPQ07021 282 aaKnown RBP10.5□□□□□ -0.73
PRKCH-208ENST00000553846 MTMR3Q13615 1198 aa10.5□□□□□ -0.73
PRKCH-208ENST00000553846 GNPTABQ3T906 1256 aa10.5□□□□□ -0.73
PRKCH-208ENST00000553846 CCDC178Q5BJE1 867 aa10.5□□□□□ -0.73
PRKCH-208ENST00000553846 UTP14CQ5TAP6 766 aaKnown RBP10.5□□□□□ -0.73
PRKCH-208ENST00000553846 IQCA1Q86XH1 822 aa10.5□□□□□ -0.73
PRKCH-208ENST00000553846 ADSSL1Q8N142 457 aa10.5□□□□□ -0.73
PRKCH-208ENST00000553846 PCYT2Q99447 389 aa10.5□□□□□ -0.73
PRKCH-208ENST00000553846 POMKQ9H5K3 350 aa10.5□□□□□ -0.73
PRKCH-208ENST00000553846 CWH43Q9H720 699 aa10.5□□□□□ -0.73
PRKCH-208ENST00000553846 LZTS1Q9Y250 596 aa10.5□□□□□ -0.73
PRKCH-208ENST00000553846 HIDE1A8MVS5 230 aa10.49□□□□□ -0.73
PRKCH-208ENST00000553846 ATP9AO75110 1047 aa10.49□□□□□ -0.73
PRKCH-208ENST00000553846 NPR3P17342 541 aa10.49□□□□□ -0.73
PRKCH-208ENST00000553846 SARSP49591 514 aaKnown RBP10.49□□□□□ -0.73
PRKCH-208ENST00000553846 CLCN5P51795 746 aa10.49□□□□□ -0.73
PRKCH-208ENST00000553846 PCNX4Q63HM2 1172 aa10.49□□□□□ -0.73
PRKCH-208ENST00000553846 MCTP2Q6DN12 878 aa10.49□□□□□ -0.73
PRKCH-208ENST00000553846 PDE12Q6L8Q7 609 aaKnown RBP10.49□□□□□ -0.73
PRKCH-208ENST00000553846 FCHSD1Q86WN1 690 aa10.49□□□□□ -0.73
PRKCH-208ENST00000553846 COLGALT1Q8NBJ5 622 aa10.49□□□□□ -0.73
PRKCH-208ENST00000553846 RMDN1Q96DB5 314 aa10.49□□□□□ -0.73
PRKCH-208ENST00000553846 ERVK-5Q9HDB9 667 aa10.49□□□□□ -0.73
PRKCH-208ENST00000553846 RNF19AQ9NV58 838 aa10.49□□□□□ -0.73
PRKCH-208ENST00000553846 RCAN3Q9UKA8 241 aa10.49□□□□□ -0.73
PRKCH-208ENST00000553846 MAP1BP46821 2468 aaKnown RBP10.49□□□□□ -0.73
PRKCH-208ENST00000553846 TRIM6-TRIM34B2RNG4 842 aa10.48□□□□□ -0.73
PRKCH-208ENST00000553846 C9IYK1 514 aa10.48□□□□□ -0.73
PRKCH-208ENST00000553846 DHX16O60231 1041 aaKnown RBP10.48□□□□□ -0.73
PRKCH-208ENST00000553846 RPLP2P05387 115 aaKnown RBP10.48□□□□□ -0.73
PRKCH-208ENST00000553846 STAG3L1P0CL83 205 aa10.48□□□□□ -0.73
PRKCH-208ENST00000553846 HOXB8P17481 243 aaPredicted RBP10.48□□□□□ -0.73
PRKCH-208ENST00000553846 ITGB5P18084 799 aa10.48□□□□□ -0.73
PRKCH-208ENST00000553846 SP100P23497 879 aaPredicted RBP10.48□□□□□ -0.73
PRKCH-208ENST00000553846 TECP42680 631 aa10.48□□□□□ -0.73
PRKCH-208ENST00000553846 PLCB3Q01970 1234 aa10.48□□□□□ -0.73
PRKCH-208ENST00000553846 APOBRQ0VD83 1088 aa10.48□□□□□ -0.73
PRKCH-208ENST00000553846 RSPH3Q86UC2 560 aa10.48□□□□□ -0.73
PRKCH-208ENST00000553846 FEZF2Q8TBJ5 459 aa10.48□□□□□ -0.73
PRKCH-208ENST00000553846 TMEM40Q8WWA1 233 aa10.48□□□□□ -0.73
PRKCH-208ENST00000553846 PIGSQ96S52 555 aa10.48□□□□□ -0.73
PRKCH-208ENST00000553846 ERAP1Q9NZ08 941 aa10.48□□□□□ -0.73
PRKCH-208ENST00000553846 RTEL1Q9NZ71 1219 aa10.48□□□□□ -0.73
PRKCH-208ENST00000553846 TRPV2Q9Y5S1 764 aa10.48□□□□□ -0.73
PRKCH-208ENST00000553846 PIK3CDO00329 1044 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 MEIS2O14770 477 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 PPFIA3O75145 1194 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 ASGR2P07307 311 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 INSRRP14616 1297 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 MARK3P27448 753 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 SP4Q02446 784 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 PAK2Q13177 524 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 GRM4Q14833 912 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 FAM102BQ5T8I3 360 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 XRRA1Q6P2D8 792 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 LRRC55Q6ZSA7 311 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 CCDC105Q8IYK2 499 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 ZDHHC14Q8IZN3 488 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 MRPS27Q92552 414 aaKnown RBP10.47□□□□□ -0.73
PRKCH-208ENST00000553846 FAM49AQ9H0Q0 323 aaPredicted RBP10.47□□□□□ -0.73
PRKCH-208ENST00000553846 ADAM7Q9H2U9 754 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 NR2E1Q9Y466 385 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 PCDHB12Q9Y5F1 795 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 PCDHA2Q9Y5H9 948 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 HCFC2Q9Y5Z7 792 aa10.47□□□□□ -0.73
PRKCH-208ENST00000553846 PNMA6FA0A0J9YX94 578 aa10.46□□□□□ -0.73
PRKCH-208ENST00000553846 ZNF213O14771 459 aa10.46□□□□□ -0.73
PRKCH-208ENST00000553846 PI15O43692 258 aa10.46□□□□□ -0.73
PRKCH-208ENST00000553846 KRT37O76014 449 aa10.46□□□□□ -0.73
PRKCH-208ENST00000553846 AOC1P19801 751 aa10.46□□□□□ -0.73
PRKCH-208ENST00000553846 FAM189BP81408 668 aa10.46□□□□□ -0.73
PRKCH-208ENST00000553846 TMEM62Q0P6H9 643 aa10.46□□□□□ -0.73
PRKCH-208ENST00000553846 TROAPQ12815 778 aa10.46□□□□□ -0.73
PRKCH-208ENST00000553846 TMEM266Q2M3C6 531 aa10.46□□□□□ -0.73
PRKCH-208ENST00000553846 IFIT1BQ5T764 474 aaKnown RBP10.46□□□□□ -0.73
PRKCH-208ENST00000553846 IER5Q5VY09 327 aa10.46□□□□□ -0.73
PRKCH-208ENST00000553846 PLPP4Q5VZY2 271 aa10.46□□□□□ -0.73
PRKCH-208ENST00000553846 FAM43BQ6ZT52 329 aaPredicted RBP10.46□□□□□ -0.73
PRKCH-208ENST00000553846 CYB5R4Q7L1T6 521 aa10.46□□□□□ -0.73
PRKCH-208ENST00000553846 HOMER1Q86YM7 354 aa10.46□□□□□ -0.73
PRKCH-208ENST00000553846 GIMAP8Q8ND71 665 aaPredicted RBP10.46□□□□□ -0.73
PRKCH-208ENST00000553846 TRAPPC12Q8WVT3 735 aa10.46□□□□□ -0.73
PRKCH-208ENST00000553846 SEPT1Q8WYJ6 367 aa10.46□□□□□ -0.73
PRKCH-208ENST00000553846 GPRASP2Q96D09 838 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms