RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 ACTRT1Q8TDG2 376 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 P3H4Q92791 437 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 RPGRQ92834 1020 aaKnown RBP5.9□□□□□ -1.46
CCNT1-204ENST00000551989 DNAJC19Q96DA6 116 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 DYNLL2Q96FJ2 89 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 CAPZA3Q96KX2 299 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 CRAMP1Q96RY5 1269 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 PIGSQ96S52 555 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 NAP1L3Q99457 506 aaPredicted RBP5.9□□□□□ -1.46
CCNT1-204ENST00000551989 MKNK1Q9BUB5 465 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 MRIQ9BWK5 157 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 TLR10Q9BXR5 811 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 FAM129AQ9BZQ8 928 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 COA1Q9GZY4 146 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 SLITRK6Q9H5Y7 841 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 SLC39A2Q9NP94 309 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 PANK4Q9NVE7 773 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 HDAC6Q9UBN7 1215 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 TRIM10Q9UDY6 481 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 DDX25Q9UHL0 483 aaKnown RBP5.9□□□□□ -1.46
CCNT1-204ENST00000551989 PCDHA12Q9UN75 941 aa5.9□□□□□ -1.46
CCNT1-204ENST00000551989 RCCD1A6NED2 376 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 AGPSO00116 658 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 PDE2AO00408 941 aaPredicted RBP5.89□□□□□ -1.47
CCNT1-204ENST00000551989 TRAF5O00463 557 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 PDXKO00764 312 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 ZBTB5O15062 677 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 GNPATO15228 680 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 EIF3DO15371 548 aaKnown RBP eCLIP5.89□□□□□ -1.47
CCNT1-204ENST00000551989 MARCH6O60337 910 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 N4BP1O75113 896 aaKnown RBP5.89□□□□□ -1.47
CCNT1-204ENST00000551989 MOCS3O95396 460 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 FERP16591 822 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 HSPA6P17066 643 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 GAP43P17677 238 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 RFC4P35249 363 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 HSPA9P38646 679 aaKnown RBP5.89□□□□□ -1.47
CCNT1-204ENST00000551989 FKBP1AP62942 108 aaKnown RBP5.89□□□□□ -1.47
CCNT1-204ENST00000551989 CYP27A1Q02318 531 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 KLHL30Q0D2K2 578 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 BIRC3Q13489 604 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 MYBPC2Q14324 1141 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 PLCB4Q15147 1175 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 SLC15A2Q16348 729 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 Q4G0T1 1027 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 TRAPPC3LQ5T215 181 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 USP17L2Q6R6M4 530 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 RUFY4Q6ZNE9 571 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 TADA2BQ86TJ2 420 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 SUGP1Q8IWZ8 645 aaKnown RBP5.89□□□□□ -1.47
CCNT1-204ENST00000551989 LRRC15Q8TF66 581 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 FAM20AQ96MK3 541 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 INPP4AQ96PE3 977 aaPredicted RBP5.89□□□□□ -1.47
CCNT1-204ENST00000551989 TACO1Q9BSH4 297 aaKnown RBP5.89□□□□□ -1.47
CCNT1-204ENST00000551989 PRR14Q9BWN1 585 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 LSM14BQ9BX40 385 aaKnown RBP5.89□□□□□ -1.47
CCNT1-204ENST00000551989 TANGO6Q9C0B7 1094 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 ISCUQ9H1K1 167 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 GANQ9H2C0 597 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 DHX36Q9H2U1 1008 aaKnown RBP5.89□□□□□ -1.47
CCNT1-204ENST00000551989 KCTD10Q9H3F6 313 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 SUGCTQ9HAC7 445 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 KCNMB3Q9NPA1 279 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 FAM207AQ9NSI2 230 aaPredicted RBP5.89□□□□□ -1.47
CCNT1-204ENST00000551989 TYW1Q9NV66 732 aaKnown RBP5.89□□□□□ -1.47
CCNT1-204ENST00000551989 TMEM51Q9NW97 253 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 KCND2Q9NZV8 630 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 SEL1LQ9UBV2 794 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 BIN2Q9UBW5 565 aaPredicted RBP5.89□□□□□ -1.47
CCNT1-204ENST00000551989 SERPINB13Q9UIV8 391 aa5.89□□□□□ -1.47
CCNT1-204ENST00000551989 CCNL1Q9UK58 526 aaPredicted RBP5.89□□□□□ -1.47
CCNT1-204ENST00000551989 TTC7AQ9ULT0 858 aaPredicted RBP5.89□□□□□ -1.47
CCNT1-204ENST00000551989 WDR81Q562E7 1941 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 RNF223E7ERA6 249 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 PGRMC1O00264 195 aaKnown RBP5.88□□□□□ -1.47
CCNT1-204ENST00000551989 ADAMTS3O15072 1205 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 SLC37A4O43826 429 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 SRGAP2O75044 1071 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 COBLO75128 1261 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 KIAA0754O94854 1291 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 UFL1O94874 794 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 ERLIN2O94905 339 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 HEXIM1O94992 359 aaKnown RBP5.88□□□□□ -1.47
CCNT1-204ENST00000551989 KIF4AO95239 1232 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 TDP2O95551 362 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 AFPP02771 609 aaKnown RBP5.88□□□□□ -1.47
CCNT1-204ENST00000551989 PLA2G4BP0C869 781 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 MYBP10242 640 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 RPA1P27694 616 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 CIITAP33076 1130 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 TNNI2P48788 182 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 KLK7P49862 253 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 MMP14P50281 582 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 IRAK1P51617 712 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 NAP1L1P55209 391 aaKnown RBP5.88□□□□□ -1.47
CCNT1-204ENST00000551989 EIF3BP55884 814 aaKnown RBP5.88□□□□□ -1.47
CCNT1-204ENST00000551989 HDLBPQ00341 1268 aaKnown RBP5.88□□□□□ -1.47
CCNT1-204ENST00000551989 KCNMA1Q12791 1236 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 ALCAMQ13740 583 aa5.88□□□□□ -1.47
CCNT1-204ENST00000551989 RAPGEF1Q13905 1077 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms