RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 MARCH6O60337 910 aa18.41■□□□□ 0.54
GCN1-209ENST00000551920 BAG4O95429 457 aaKnown RBP18.41■□□□□ 0.54
GCN1-209ENST00000551920 CSF2RAP15509 400 aa18.41■□□□□ 0.54
GCN1-209ENST00000551920 RILPL1Q5EBL4 403 aa18.41■□□□□ 0.54
GCN1-209ENST00000551920 TRMT1LQ7Z2T5 733 aaKnown RBP18.41■□□□□ 0.54
GCN1-209ENST00000551920 SCLYQ96I15 445 aa18.41■□□□□ 0.54
GCN1-209ENST00000551920 PCDHA12Q9UN75 941 aa18.41■□□□□ 0.54
GCN1-209ENST00000551920 STX6O43752 255 aa18.4■□□□□ 0.54
GCN1-209ENST00000551920 OATP04181 439 aa18.4■□□□□ 0.54
GCN1-209ENST00000551920 HSP90AA1P07900 732 aaKnown RBP18.4■□□□□ 0.54
GCN1-209ENST00000551920 CKBP12277 381 aa18.4■□□□□ 0.54
GCN1-209ENST00000551920 FPGSQ05932 587 aa18.4■□□□□ 0.54
GCN1-209ENST00000551920 PTGDRQ13258 359 aa18.4■□□□□ 0.54
GCN1-209ENST00000551920 BRAPQ7Z569 592 aa18.4■□□□□ 0.54
GCN1-209ENST00000551920 CKAP2LQ8IYA6 745 aa18.4■□□□□ 0.54
GCN1-209ENST00000551920 CAGE1Q8TC20 777 aa18.4■□□□□ 0.54
GCN1-209ENST00000551920 RGL1Q9NZL6 768 aa18.4■□□□□ 0.54
GCN1-209ENST00000551920 TRIP12Q14669 1992 aaPredicted RBP18.39■□□□□ 0.53
GCN1-209ENST00000551920 HBP1O60381 514 aa18.39■□□□□ 0.53
GCN1-209ENST00000551920 GNAT1P11488 350 aa18.39■□□□□ 0.53
GCN1-209ENST00000551920 BMP8BP34820 402 aa18.39■□□□□ 0.53
GCN1-209ENST00000551920 CYP4A11Q02928 519 aa18.39■□□□□ 0.53
GCN1-209ENST00000551920 BFSP2Q13515 415 aa18.39■□□□□ 0.53
GCN1-209ENST00000551920 PKP1Q13835 747 aa18.39■□□□□ 0.53
GCN1-209ENST00000551920 MBTPS1Q14703 1052 aa18.39■□□□□ 0.53
GCN1-209ENST00000551920 GPNMBQ14956 572 aa18.39■□□□□ 0.53
GCN1-209ENST00000551920 EPHA7Q15375 998 aa18.39■□□□□ 0.53
GCN1-209ENST00000551920 IL17AQ16552 155 aa18.39■□□□□ 0.53
GCN1-209ENST00000551920 FAM173BQ6P4H8 233 aa18.39■□□□□ 0.53
GCN1-209ENST00000551920 C16orf59Q7L2K0 433 aa18.39■□□□□ 0.53
GCN1-209ENST00000551920 BBXQ8WY36 941 aaPredicted RBP18.39■□□□□ 0.53
GCN1-209ENST00000551920 DYDC2Q96IM9 177 aa18.39■□□□□ 0.53
GCN1-209ENST00000551920 LXNQ9BS40 222 aa18.39■□□□□ 0.53
GCN1-209ENST00000551920 FTOQ9C0B1 505 aaKnown RBP eCLIP18.39■□□□□ 0.53
GCN1-209ENST00000551920 COL1A2P08123 1366 aa18.39■□□□□ 0.53
GCN1-209ENST00000551920 WDR81Q562E7 1941 aa18.39■□□□□ 0.53
GCN1-209ENST00000551920 RRN3P2A6NIE6 340 aa18.38■□□□□ 0.53
GCN1-209ENST00000551920 C22orf31O95567 290 aa18.38■□□□□ 0.53
GCN1-209ENST00000551920 IQCF3P0C7M6 154 aa18.38■□□□□ 0.53
GCN1-209ENST00000551920 THPOP40225 353 aa18.38■□□□□ 0.53
GCN1-209ENST00000551920 PSMC5P62195 406 aa18.38■□□□□ 0.53
GCN1-209ENST00000551920 C9orf50Q5SZB4 431 aa18.38■□□□□ 0.53
GCN1-209ENST00000551920 ZNF618Q5T7W0 954 aa18.38■□□□□ 0.53
GCN1-209ENST00000551920 LRRC8DQ7L1W4 858 aa18.38■□□□□ 0.53
GCN1-209ENST00000551920 FAM167AQ96KS9 214 aa18.38■□□□□ 0.53
GCN1-209ENST00000551920 CEP89Q96ST8 783 aa18.38■□□□□ 0.53
GCN1-209ENST00000551920 EIF2AK1Q9BQI3 630 aaKnown RBP18.38■□□□□ 0.53
GCN1-209ENST00000551920 OSBPL7Q9BZF2 842 aa18.38■□□□□ 0.53
GCN1-209ENST00000551920 UBE2OQ9C0C9 1292 aaKnown RBP18.38■□□□□ 0.53
GCN1-209ENST00000551920 P4HBP07237 508 aaKnown RBP18.37■□□□□ 0.53
GCN1-209ENST00000551920 CTSHP09668 335 aa18.37■□□□□ 0.53
GCN1-209ENST00000551920 ACRP10323 421 aa18.37■□□□□ 0.53
GCN1-209ENST00000551920 SELPP16109 830 aa18.37■□□□□ 0.53
GCN1-209ENST00000551920 TECP42680 631 aa18.37■□□□□ 0.53
GCN1-209ENST00000551920 QARSP47897 775 aaKnown RBP18.37■□□□□ 0.53
GCN1-209ENST00000551920 ATP2C1P98194 919 aaPredicted RBP18.37■□□□□ 0.53
GCN1-209ENST00000551920 CTTNQ14247 550 aaKnown RBP18.37■□□□□ 0.53
GCN1-209ENST00000551920 TARBP2Q15633 366 aaKnown RBP18.37■□□□□ 0.53
GCN1-209ENST00000551920 MTHFD1LQ6UB35 978 aa18.37■□□□□ 0.53
GCN1-209ENST00000551920 ANO5Q75V66 913 aa18.37■□□□□ 0.53
GCN1-209ENST00000551920 TMEM199Q8N511 208 aa18.37■□□□□ 0.53
GCN1-209ENST00000551920 CCDC155Q8N6L0 562 aa18.37■□□□□ 0.53
GCN1-209ENST00000551920 HSD17B14Q9BPX1 270 aa18.37■□□□□ 0.53
GCN1-209ENST00000551920 SH2D3AQ9BRG2 576 aa18.37■□□□□ 0.53
GCN1-209ENST00000551920 SEPT9Q9UHD8 586 aaPredicted RBP18.37■□□□□ 0.53
GCN1-209ENST00000551920 SLITRK3O94933 977 aa18.36■□□□□ 0.53
GCN1-209ENST00000551920 KLRC1P26715 233 aa18.36■□□□□ 0.53
GCN1-209ENST00000551920 FXR2P51116 673 aaKnown RBP eCLIP18.36■□□□□ 0.534e-8■■■■□ 21
GCN1-209ENST00000551920 XKR3Q5GH77 459 aa18.36■□□□□ 0.53
GCN1-209ENST00000551920 ZNF484Q5JVG2 852 aa18.36■□□□□ 0.53
GCN1-209ENST00000551920 PLA2G4FQ68DD2 849 aa18.36■□□□□ 0.53
GCN1-209ENST00000551920 TAF2Q6P1X5 1199 aa18.36■□□□□ 0.53
GCN1-209ENST00000551920 RPAINQ86UA6 219 aa18.36■□□□□ 0.53
GCN1-209ENST00000551920 DNAJB3Q8WWF6 145 aa18.36■□□□□ 0.53
GCN1-209ENST00000551920 FAM49AQ9H0Q0 323 aaPredicted RBP18.36■□□□□ 0.53
GCN1-209ENST00000551920 PCDHA2Q9Y5H9 948 aa18.36■□□□□ 0.53
GCN1-209ENST00000551920 TRIOBPQ9H2D6 2365 aa18.35■□□□□ 0.53
GCN1-209ENST00000551920 SCN5AQ14524 2016 aa18.35■□□□□ 0.53
GCN1-209ENST00000551920 SIP14410 1827 aa18.35■□□□□ 0.53
GCN1-209ENST00000551920 PP2D1A8MPX8 630 aa18.35■□□□□ 0.53
GCN1-209ENST00000551920 ZBTB39O15060 712 aa18.35■□□□□ 0.53
GCN1-209ENST00000551920 NBNO60934 754 aa18.35■□□□□ 0.53
GCN1-209ENST00000551920 SPATA31C1P0DKV0 1188 aa18.35■□□□□ 0.53
GCN1-209ENST00000551920 PRPHP41219 470 aa18.35■□□□□ 0.53
GCN1-209ENST00000551920 PPIGQ13427 754 aaKnown RBP eCLIP18.35■□□□□ 0.532e-11■■■■□ 20.2
GCN1-209ENST00000551920 SHHQ15465 462 aa18.35■□□□□ 0.53
GCN1-209ENST00000551920 LINC01465Q8N7H1 131 aa18.35■□□□□ 0.53
GCN1-209ENST00000551920 IGSF22Q8N9C0 903 aa18.35■□□□□ 0.53
GCN1-209ENST00000551920 ZNF579Q8NAF0 562 aaKnown RBP18.35■□□□□ 0.53
GCN1-209ENST00000551920 RETREG2Q8NC44 543 aa18.35■□□□□ 0.53
GCN1-209ENST00000551920 TNPO1Q92973 898 aaKnown RBP18.35■□□□□ 0.53
GCN1-209ENST00000551920 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.35■□□□□ 0.535e-11■■■□□ 14.8
GCN1-209ENST00000551920 NIFKQ9BYG3 293 aaKnown RBP18.35■□□□□ 0.53
GCN1-209ENST00000551920 IL23AQ9NPF7 189 aa18.35■□□□□ 0.53
GCN1-209ENST00000551920 MYH9P35579 1960 aaKnown RBP18.34■□□□□ 0.53
GCN1-209ENST00000551920 LAD1O00515 517 aa18.34■□□□□ 0.53
GCN1-209ENST00000551920 CAND2O75155 1236 aa18.34■□□□□ 0.53
GCN1-209ENST00000551920 MED24O75448 989 aa18.34■□□□□ 0.53
GCN1-209ENST00000551920 CHRNA1P02708 482 aa18.34■□□□□ 0.53
GCN1-209ENST00000551920 MGAT3Q09327 533 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms