RNA–Protein interactions for RNA: ENST00000551710.1

CNOT2-233, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-233	ENST00000551710	MTDH	Q86UE4	582 aa	Known RBP	5.04	□□□□□ -1.6
CNOT2-233	ENST00000551710	IFNL3	Q8IZI9	196 aa		5.04	□□□□□ -1.6
CNOT2-233	ENST00000551710	UHMK1	Q8TAS1	419 aa	Known RBP	5.04	□□□□□ -1.6
CNOT2-233	ENST00000551710	SH3RF2	Q8TEC5	729 aa		5.04	□□□□□ -1.6
CNOT2-233	ENST00000551710	DPYSL5	Q9BPU6	564 aa		5.04	□□□□□ -1.6
CNOT2-233	ENST00000551710	TRBV23-1	A0A0A0MS06	115 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	ZNF839	A8K0R7	811 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	ACOT7	O00154	380 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	PPFIA2	O75334	1257 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	C6orf222	P0C671	652 aa	Predicted RBP	5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	KRT15	P19012	456 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	POLD1	P28340	1107 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	INHBC	P55103	352 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	NANOS3	P60323	173 aa	Known RBP	5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	PURA	Q00577	322 aa	Known RBP	5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	ZMAT1	Q5H9K5	638 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710		Q6ZSN1	163 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	ZNF575	Q86XF7	245 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	DNAJC10	Q8IXB1	793 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	PMFBP1	Q8TBY8	1022 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	ZG16B	Q96DA0	208 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	PDGFD	Q9GZP0	370 aa	Predicted RBP	5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	SLC39A2	Q9NP94	309 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	DSE	Q9UL01	958 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	OAZ3	Q9UMX2	235 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	NR2E1	Q9Y466	385 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	PCDHA9	Q9Y5H5	950 aa		5.03	□□□□□ -1.6
CNOT2-233	ENST00000551710	KDM2B	Q8NHM5	1336 aa		5.02	□□□□□ -1.61
CNOT2-233	ENST00000551710	PYGM	P11217	842 aa		5.02	□□□□□ -1.61
CNOT2-233	ENST00000551710	HIBADH	P31937	336 aa	Known RBP	5.02	□□□□□ -1.61
CNOT2-233	ENST00000551710	RASGRF1	Q13972	1273 aa		5.02	□□□□□ -1.61
CNOT2-233	ENST00000551710	RASA3	Q14644	834 aa		5.02	□□□□□ -1.61
CNOT2-233	ENST00000551710	FSTL4	Q6MZW2	842 aa		5.02	□□□□□ -1.61
CNOT2-233	ENST00000551710	DPP8	Q6V1X1	898 aa	Predicted RBP	5.02	□□□□□ -1.61
CNOT2-233	ENST00000551710	AMER2	Q8N7J2	671 aa		5.02	□□□□□ -1.61
CNOT2-233	ENST00000551710	IL17D	Q8TAD2	202 aa		5.02	□□□□□ -1.61
CNOT2-233	ENST00000551710	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	5.02	□□□□□ -1.61
CNOT2-233	ENST00000551710	ZFYVE21	Q9BQ24	234 aa		5.02	□□□□□ -1.61
CNOT2-233	ENST00000551710	ALG1	Q9BT22	464 aa		5.02	□□□□□ -1.61
CNOT2-233	ENST00000551710	SNTG2	Q9NY99	539 aa		5.02	□□□□□ -1.61
CNOT2-233	ENST00000551710	CBLC	Q9ULV8	474 aa		5.02	□□□□□ -1.61
CNOT2-233	ENST00000551710	FAM47E-STBD1	D6RA91	191 aa		5.01	□□□□□ -1.61
CNOT2-233	ENST00000551710	CUTA	O60888	179 aa		5.01	□□□□□ -1.61
CNOT2-233	ENST00000551710	ADH4	P08319	380 aa		5.01	□□□□□ -1.61
CNOT2-233	ENST00000551710	PDE6A	P16499	860 aa		5.01	□□□□□ -1.61
CNOT2-233	ENST00000551710	GUCY1A3	Q02108	690 aa		5.01	□□□□□ -1.61
CNOT2-233	ENST00000551710	TUBA3C	Q13748	450 aa		5.01	□□□□□ -1.61
CNOT2-233	ENST00000551710	WDR72	Q3MJ13	1102 aa		5.01	□□□□□ -1.61
CNOT2-233	ENST00000551710	TUBA3E	Q6PEY2	450 aa		5.01	□□□□□ -1.61
CNOT2-233	ENST00000551710	KCTD1	Q719H9	257 aa		5.01	□□□□□ -1.61
CNOT2-233	ENST00000551710	PTRH1	Q86Y79	214 aa	Known RBP	5.01	□□□□□ -1.61
CNOT2-233	ENST00000551710	ZNF808	Q8N4W9	903 aa	Predicted RBP	5.01	□□□□□ -1.61
CNOT2-233	ENST00000551710	CISD2	Q8N5K1	135 aa	Known RBP	5.01	□□□□□ -1.61
CNOT2-233	ENST00000551710	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	5.01	□□□□□ -1.61
CNOT2-233	ENST00000551710	DEPDC7	Q96QD5	511 aa		5.01	□□□□□ -1.61
CNOT2-233	ENST00000551710	PLA2G12B	Q9BX93	195 aa		5.01	□□□□□ -1.61
CNOT2-233	ENST00000551710	MMRN2	Q9H8L6	949 aa		5.01	□□□□□ -1.61
CNOT2-233	ENST00000551710	REXO2	Q9Y3B8	237 aa	Known RBP	5.01	□□□□□ -1.61
CNOT2-233	ENST00000551710	FAM90A27P	A6NNH2	459 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	RASGRP1	O95267	797 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	CRTAM	O95727	393 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	AMY2A	P04746	511 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	AMY2B	P19961	511 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	DNM2	P50570	870 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	EPHA5	P54756	1037 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	SERINC3	Q13530	473 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	MAMDC4	Q6UXC1	1216 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	ARHGAP36	Q6ZRI8	547 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	SGMS1	Q86VZ5	419 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	OSTM1	Q86WC4	334 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	PCDH19	Q8TAB3	1148 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	ZNF669	Q96BR6	464 aa	Predicted RBP	5	□□□□□ -1.61
CNOT2-233	ENST00000551710	DNAJC7	Q99615	494 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	CATSPERZ	Q9NTU4	200 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	RIC8B	Q9NVN3	520 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	ARHGAP28	Q9P2N2	729 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	NDOR1	Q9UHB4	597 aa		5	□□□□□ -1.61
CNOT2-233	ENST00000551710	PUF60	Q9UHX1	559 aa	Known RBP	5	□□□□□ -1.61
CNOT2-233	ENST00000551710	MRPS23	Q9Y3D9	190 aa	Known RBP	5	□□□□□ -1.61
CNOT2-233	ENST00000551710	MAN2B1	O00754	1011 aa		4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	MAK	P20794	623 aa		4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	ACRV1	P26436	265 aa		4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	MC4R	P32245	332 aa		4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	MSX2	P35548	267 aa	Predicted RBP	4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	RPS19	P39019	145 aa	Known RBP	4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	KCNQ1	P51787	676 aa		4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	JAM2	P57087	298 aa		4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	SUMO1	P63165	101 aa	Known RBP	4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	HHEX	Q03014	270 aa		4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	PAK1	Q13153	545 aa		4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	TOP3A	Q13472	1001 aa	Predicted RBP	4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	SCUBE1	Q8IWY4	988 aa		4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	SCYL1	Q96KG9	808 aa		4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	CRAMP1	Q96RY5	1269 aa		4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	SRPK1	Q96SB4	655 aa	Known RBP	4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	DNAJC2	Q99543	621 aa	Known RBP	4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	CCDC113	Q9H0I3	377 aa		4.99	□□□□□ -1.61
CNOT2-233	ENST00000551710	SLC52A2	Q9HAB3	445 aa		4.99	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms