RNA–Protein interactions for RNA: ENST00000551710.1

CNOT2-233, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-233ENST00000551710 AEBP2Q6ZN18 517 aaPredicted RBP24.02■■□□□ 1.44
CNOT2-233ENST00000551710 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.24
CNOT2-233ENST00000551710 SENP3Q9H4L4 574 aaPredicted RBP20.53■□□□□ 0.88
CNOT2-233ENST00000551710 PHF23Q9BUL5 403 aaPredicted RBP20.29■□□□□ 0.84
CNOT2-233ENST00000551710 FOXD1Q16676 465 aa19.14■□□□□ 0.65
CNOT2-233ENST00000551710 PLPPR3Q6T4P5 718 aa18.2■□□□□ 0.5
CNOT2-233ENST00000551710 MSH5O43196 834 aa17.94■□□□□ 0.46
CNOT2-233ENST00000551710 PIAS4Q8N2W9 510 aaPredicted RBP17.93■□□□□ 0.46
CNOT2-233ENST00000551710 PPP6R1Q9UPN7 881 aa17.87■□□□□ 0.45
CNOT2-233ENST00000551710 ADRA2BP18089 450 aa17.84■□□□□ 0.45
CNOT2-233ENST00000551710 POTEDQ86YR6 584 aa17.6■□□□□ 0.41
CNOT2-233ENST00000551710 MAPK8IP2Q13387 824 aaPredicted RBP16.41■□□□□ 0.22
CNOT2-233ENST00000551710 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
CNOT2-233ENST00000551710 DMRT2Q9Y5R5 561 aa16.25■□□□□ 0.19
CNOT2-233ENST00000551710 PPP4R3CPQ6ZMV5 832 aa15.97■□□□□ 0.15
CNOT2-233ENST00000551710 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
CNOT2-233ENST00000551710 CNKSR2Q8WXI2 1034 aa15.66■□□□□ 0.1
CNOT2-233ENST00000551710 HOXD11P31277 338 aaPredicted RBP15.61■□□□□ 0.09
CNOT2-233ENST00000551710 CACNB1Q02641 598 aaPredicted RBP15.51■□□□□ 0.07
CNOT2-233ENST00000551710 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
CNOT2-233ENST00000551710 NCBP3Q53F19 620 aaKnown RBP15.36■□□□□ 0.05
CNOT2-233ENST00000551710 RNF39Q9H2S5 420 aa15.27■□□□□ 0.04
CNOT2-233ENST00000551710 NPM3O75607 178 aaKnown RBP15.09■□□□□ 0.01
CNOT2-233ENST00000551710 C1QBPQ07021 282 aaKnown RBP15.07■□□□□ 0
CNOT2-233ENST00000551710 DNAJC5BQ9UF47 199 aa15.02■□□□□ -0
CNOT2-233ENST00000551710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.012e-6■■□□□ 11.9
CNOT2-233ENST00000551710 KCNA4P22459 653 aa14.77□□□□□ -0.05
CNOT2-233ENST00000551710 U3KPZ7 1027 aaPredicted RBP14.58□□□□□ -0.08
CNOT2-233ENST00000551710 CAPN15O75808 1086 aa14.47□□□□□ -0.09
CNOT2-233ENST00000551710 SPINK5Q9NQ38 1064 aaPredicted RBP14.43□□□□□ -0.1
CNOT2-233ENST00000551710 SLC4A2P04920 1241 aa14.4□□□□□ -0.1
CNOT2-233ENST00000551710 DSG3P32926 999 aa14.31□□□□□ -0.12
CNOT2-233ENST00000551710 TRHP20396 242 aaPredicted RBP14.24□□□□□ -0.13
CNOT2-233ENST00000551710 APLP2Q06481 763 aa14.22□□□□□ -0.13
CNOT2-233ENST00000551710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.19□□□□□ -0.14
CNOT2-233ENST00000551710 HNRNPUL2Q1KMD3 747 aaKnown RBP14.19□□□□□ -0.14
CNOT2-233ENST00000551710 ABCB7O75027 752 aa14.13□□□□□ -0.15
CNOT2-233ENST00000551710 ZNF219Q9P2Y4 722 aaPredicted RBP14.12□□□□□ -0.15
CNOT2-233ENST00000551710 SAMD1Q6SPF0 538 aaPredicted RBP14.1□□□□□ -0.15
CNOT2-233ENST00000551710 MYCNP04198 464 aaPredicted RBP13.96□□□□□ -0.17
CNOT2-233ENST00000551710 SLC4A1APQ9BWU0 796 aaKnown RBP13.96□□□□□ -0.17
CNOT2-233ENST00000551710 POLA2Q14181 598 aa13.81□□□□□ -0.2
CNOT2-233ENST00000551710 POTEHQ6S545 545 aa13.81□□□□□ -0.2
CNOT2-233ENST00000551710 FOXD4L1Q9NU39 408 aa13.79□□□□□ -0.2
CNOT2-233ENST00000551710 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
CNOT2-233ENST00000551710 ATF5Q9Y2D1 282 aaPredicted RBP13.65□□□□□ -0.22
CNOT2-233ENST00000551710 ZBTB22O15209 634 aa13.53□□□□□ -0.24
CNOT2-233ENST00000551710 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
CNOT2-233ENST00000551710 CHRDL2Q6WN34 429 aa13.4□□□□□ -0.26
CNOT2-233ENST00000551710 OSCARQ8IYS5 282 aa13.34□□□□□ -0.27
CNOT2-233ENST00000551710 AKT1S1Q96B36 256 aa13.34□□□□□ -0.27
CNOT2-233ENST00000551710 ATXN8OSP0DMR3 200 aa13.33□□□□□ -0.28
CNOT2-233ENST00000551710 REM2Q8IYK8 340 aaPredicted RBP13.23□□□□□ -0.29
CNOT2-233ENST00000551710 FBLN2P98095 1184 aa13.18□□□□□ -0.3
CNOT2-233ENST00000551710 PITPNM1O00562 1244 aa13.07□□□□□ -0.32
CNOT2-233ENST00000551710 PIP4P2Q8N4L2 257 aa13.06□□□□□ -0.32
CNOT2-233ENST00000551710 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
CNOT2-233ENST00000551710 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
CNOT2-233ENST00000551710 SPDYE2Q495Y8 402 aa13.05□□□□□ -0.32
CNOT2-233ENST00000551710 MKRN4PQ13434 485 aaPredicted RBP12.99□□□□□ -0.33
CNOT2-233ENST00000551710 ZNF692Q9BU19 519 aaPredicted RBP12.96□□□□□ -0.33
CNOT2-233ENST00000551710 FXR2P51116 673 aaKnown RBP eCLIP12.95□□□□□ -0.34
CNOT2-233ENST00000551710 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
CNOT2-233ENST00000551710 HAX1O00165 279 aa12.93□□□□□ -0.34
CNOT2-233ENST00000551710 SP7Q8TDD2 431 aaPredicted RBP12.91□□□□□ -0.34
CNOT2-233ENST00000551710 CSRNP3Q8WYN3 585 aa12.9□□□□□ -0.34
CNOT2-233ENST00000551710 SPDYE1Q8NFV5 336 aaPredicted RBP12.87□□□□□ -0.35
CNOT2-233ENST00000551710 SSUH2Q9Y2M2 353 aa12.82□□□□□ -0.36
CNOT2-233ENST00000551710 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
CNOT2-233ENST00000551710 PRKAR2AP13861 404 aaKnown RBP12.79□□□□□ -0.36
CNOT2-233ENST00000551710 PABPN1Q86U42 306 aaKnown RBP eCLIP12.75□□□□□ -0.37
CNOT2-233ENST00000551710 PRR29P0C7W0 189 aa12.68□□□□□ -0.38
CNOT2-233ENST00000551710 EVX2Q03828 476 aa12.68□□□□□ -0.38
CNOT2-233ENST00000551710 CHADLQ6NUI6 762 aa12.64□□□□□ -0.39
CNOT2-233ENST00000551710 C19orf67A6NJJ6 358 aa12.53□□□□□ -0.4
CNOT2-233ENST00000551710 SPDYE4A6NLX3 237 aa12.42□□□□□ -0.42
CNOT2-233ENST00000551710 GABBR2O75899 941 aa12.41□□□□□ -0.42
CNOT2-233ENST00000551710 FARP1Q9Y4F1 1045 aaPredicted RBP12.41□□□□□ -0.42
CNOT2-233ENST00000551710 CD44P16070 742 aaKnown RBP12.37□□□□□ -0.43
CNOT2-233ENST00000551710 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
CNOT2-233ENST00000551710 CREBZFQ9NS37 354 aa12.27□□□□□ -0.45
CNOT2-233ENST00000551710 ZRANB1Q9UGI0 708 aa12.22□□□□□ -0.45
CNOT2-233ENST00000551710 CLCN6P51797 869 aa12.15□□□□□ -0.46
CNOT2-233ENST00000551710 LHX8Q68G74 356 aa12.14□□□□□ -0.47
CNOT2-233ENST00000551710 DCBLD2Q96PD2 775 aa12.13□□□□□ -0.47
CNOT2-233ENST00000551710 PAK3O75914 559 aaPredicted RBP12.12□□□□□ -0.47
CNOT2-233ENST00000551710 NPM1P06748 294 aaKnown RBP eCLIP12.1□□□□□ -0.47
CNOT2-233ENST00000551710 POTEIP0CG38 1075 aa12.1□□□□□ -0.47
CNOT2-233ENST00000551710 ZNF579Q8NAF0 562 aaKnown RBP12.1□□□□□ -0.47
CNOT2-233ENST00000551710 GALR2O43603 387 aaPredicted RBP12.02□□□□□ -0.49
CNOT2-233ENST00000551710 MNX1P50219 401 aaPredicted RBP12□□□□□ -0.49
CNOT2-233ENST00000551710 PHF12Q96QT6 1004 aa12□□□□□ -0.49
CNOT2-233ENST00000551710 PROM2Q8N271 834 aa11.97□□□□□ -0.49
CNOT2-233ENST00000551710 TSPYL2Q9H2G4 693 aaPredicted RBP11.93□□□□□ -0.5
CNOT2-233ENST00000551710 PLEKHG5O94827 1062 aa11.92□□□□□ -0.5
CNOT2-233ENST00000551710 MIER1Q8N108 512 aa11.92□□□□□ -0.5
CNOT2-233ENST00000551710 MS4A3Q96HJ5 214 aa11.83□□□□□ -0.52
CNOT2-233ENST00000551710 PLCD3Q8N3E9 789 aa11.82□□□□□ -0.52
CNOT2-233ENST00000551710 FKBP8Q14318 412 aa11.77□□□□□ -0.53
CNOT2-233ENST00000551710 PELP1Q8IZL8 1130 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms