RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 GRIK4Q16099 956 aa16.75■□□□□ 0.27
VPS29-209ENST00000551655 TMEM266Q2M3C6 531 aa16.75■□□□□ 0.27
VPS29-209ENST00000551655 MARCH8Q5T0T0 291 aa16.75■□□□□ 0.27
VPS29-209ENST00000551655 FAM102BQ5T8I3 360 aa16.75■□□□□ 0.27
VPS29-209ENST00000551655 RSPH3Q86UC2 560 aa16.75■□□□□ 0.27
VPS29-209ENST00000551655 COLGALT1Q8NBJ5 622 aa16.75■□□□□ 0.27
VPS29-209ENST00000551655 TCF25Q9BQ70 676 aa16.75■□□□□ 0.27
VPS29-209ENST00000551655 HINFPQ9BQA5 517 aa16.75■□□□□ 0.27
VPS29-209ENST00000551655 PADI3Q9ULW8 664 aa16.75■□□□□ 0.27
VPS29-209ENST00000551655 OTOGLQ3ZCN5 2332 aa16.74■□□□□ 0.27
VPS29-209ENST00000551655 C12orf76Q8N812 135 aaPredicted RBP16.74■□□□□ 0.27
VPS29-209ENST00000551655 CYP2W1Q8TAV3 490 aa16.74■□□□□ 0.27
VPS29-209ENST00000551655 RIN2Q8WYP3 895 aaPredicted RBP16.74■□□□□ 0.27
VPS29-209ENST00000551655 AMNQ9BXJ7 453 aa16.74■□□□□ 0.27
VPS29-209ENST00000551655 ENTPD7Q9NQZ7 604 aa16.74■□□□□ 0.27
VPS29-209ENST00000551655 TYW1Q9NV66 732 aaKnown RBP16.74■□□□□ 0.27
VPS29-209ENST00000551655 DLL3Q9NYJ7 618 aa16.74■□□□□ 0.27
VPS29-209ENST00000551655 FSD2A1L4K1 749 aa16.73■□□□□ 0.27
VPS29-209ENST00000551655 MGEA5O60502 916 aa16.73■□□□□ 0.27
VPS29-209ENST00000551655 HOXB8P17481 243 aaPredicted RBP16.73■□□□□ 0.27
VPS29-209ENST00000551655 PBX3P40426 434 aa16.73■□□□□ 0.27
VPS29-209ENST00000551655 NEDD9Q14511 834 aa16.73■□□□□ 0.27
VPS29-209ENST00000551655 RSPO4Q2I0M5 234 aaPredicted RBP16.73■□□□□ 0.27
VPS29-209ENST00000551655 ASPRV1Q53RT3 343 aa16.73■□□□□ 0.27
VPS29-209ENST00000551655 MFSD6Q6ZSS7 791 aa16.73■□□□□ 0.27
VPS29-209ENST00000551655 STAG2Q8N3U4 1231 aa16.73■□□□□ 0.27
VPS29-209ENST00000551655 TDRD5Q8NAT2 981 aaKnown RBP16.73■□□□□ 0.27
VPS29-209ENST00000551655 RASGRP4Q8TDF6 673 aa16.73■□□□□ 0.27
VPS29-209ENST00000551655 FTHL17Q9BXU8 183 aa16.73■□□□□ 0.27
VPS29-209ENST00000551655 ADAM7Q9H2U9 754 aa16.73■□□□□ 0.27
VPS29-209ENST00000551655 ERVK-5Q9HDB9 667 aa16.73■□□□□ 0.27
VPS29-209ENST00000551655 HCFC2Q9Y5Z7 792 aa16.73■□□□□ 0.27
VPS29-209ENST00000551655 BAHCC1Q9P281 2608 aa16.73■□□□□ 0.27
VPS29-209ENST00000551655 MBLAC1A4D2B0 266 aaPredicted RBP16.72■□□□□ 0.27
VPS29-209ENST00000551655 SPATA31C2B4DYI2 1134 aa16.72■□□□□ 0.27
VPS29-209ENST00000551655 TCF7P36402 384 aaPredicted RBP16.72■□□□□ 0.27
VPS29-209ENST00000551655 PAK2Q13177 524 aa16.72■□□□□ 0.27
VPS29-209ENST00000551655 RARS2Q5T160 578 aaKnown RBP16.72■□□□□ 0.27
VPS29-209ENST00000551655 CES5AQ6NT32 575 aa16.72■□□□□ 0.27
VPS29-209ENST00000551655 FAM227BQ96M60 508 aa16.72■□□□□ 0.27
VPS29-209ENST00000551655 INPP4AQ96PE3 977 aaPredicted RBP16.72■□□□□ 0.27
VPS29-209ENST00000551655 CWH43Q9H720 699 aa16.72■□□□□ 0.27
VPS29-209ENST00000551655 KAT14Q9H8E8 782 aa16.72■□□□□ 0.27
VPS29-209ENST00000551655 AAASQ9NRG9 546 aa16.72■□□□□ 0.27
VPS29-209ENST00000551655 RALYQ9UKM9 306 aaKnown RBP16.72■□□□□ 0.27
VPS29-209ENST00000551655 PCDHA1Q9Y5I3 950 aa16.72■□□□□ 0.27
VPS29-209ENST00000551655 TRPV2Q9Y5S1 764 aa16.72■□□□□ 0.27
VPS29-209ENST00000551655 TTC41PQ6P2S7 1318 aa16.71■□□□□ 0.27
VPS29-209ENST00000551655 DENND4AQ7Z401 1863 aa16.71■□□□□ 0.27
VPS29-209ENST00000551655 A0A0D9SFI3 127 aa16.71■□□□□ 0.27
VPS29-209ENST00000551655 TRIM6-TRIM34B2RNG4 842 aa16.71■□□□□ 0.27
VPS29-209ENST00000551655 PARP1P09874 1014 aaKnown RBP16.71■□□□□ 0.27
VPS29-209ENST00000551655 SARSP49591 514 aaKnown RBP16.71■□□□□ 0.27
VPS29-209ENST00000551655 GNPTABQ3T906 1256 aa16.71■□□□□ 0.27
VPS29-209ENST00000551655 PDE12Q6L8Q7 609 aaKnown RBP16.71■□□□□ 0.27
VPS29-209ENST00000551655 ZNF589Q86UQ0 364 aaPredicted RBP16.71■□□□□ 0.27
VPS29-209ENST00000551655 DGKHQ86XP1 1220 aa16.71■□□□□ 0.27
VPS29-209ENST00000551655 ZDHHC14Q8IZN3 488 aa16.71■□□□□ 0.27
VPS29-209ENST00000551655 SIX5Q8N196 739 aa16.71■□□□□ 0.27
VPS29-209ENST00000551655 MRPS27Q92552 414 aaKnown RBP16.71■□□□□ 0.27
VPS29-209ENST00000551655 CASP10Q92851 521 aa16.71■□□□□ 0.27
VPS29-209ENST00000551655 NECTIN4Q96NY8 510 aa16.71■□□□□ 0.27
VPS29-209ENST00000551655 USP24Q9UPU5 2620 aa16.7■□□□□ 0.26
VPS29-209ENST00000551655 GCOM1H8Y6P7 765 aaPredicted RBP16.7■□□□□ 0.26
VPS29-209ENST00000551655 POLR2MP0CAP2 368 aa16.7■□□□□ 0.26
VPS29-209ENST00000551655 FGFR1P11362 822 aa16.7■□□□□ 0.26
VPS29-209ENST00000551655 NFX1Q12986 1120 aaKnown RBP16.7■□□□□ 0.26
VPS29-209ENST00000551655 SLC35G1Q2M3R5 365 aa16.7■□□□□ 0.26
VPS29-209ENST00000551655 TPRNQ4KMQ1 711 aa16.7■□□□□ 0.26
VPS29-209ENST00000551655 TRAPPC12Q8WVT3 735 aa16.7■□□□□ 0.26
VPS29-209ENST00000551655 DCTPP1Q9H773 170 aa16.7■□□□□ 0.26
VPS29-209ENST00000551655 PCDHB7Q9Y5E2 793 aa16.7■□□□□ 0.26
VPS29-209ENST00000551655 CHD8Q9HCK8 2581 aa16.7■□□□□ 0.26
VPS29-209ENST00000551655 IGSF9BQ9UPX0 1349 aa16.7■□□□□ 0.26
VPS29-209ENST00000551655 FIBPO43427 364 aa16.69■□□□□ 0.26
VPS29-209ENST00000551655 MS4A1P11836 297 aa16.69■□□□□ 0.26
VPS29-209ENST00000551655 ITIH3Q06033 890 aa16.69■□□□□ 0.26
VPS29-209ENST00000551655 IER5Q5VY09 327 aa16.69■□□□□ 0.26
VPS29-209ENST00000551655 HOMER1Q86YM7 354 aa16.69■□□□□ 0.26
VPS29-209ENST00000551655 ESR2Q92731 530 aa16.69■□□□□ 0.26
VPS29-209ENST00000551655 MAP3K20Q9NYL2 800 aaKnown RBP16.69■□□□□ 0.26
VPS29-209ENST00000551655 DBR1Q9UK59 544 aaKnown RBP16.69■□□□□ 0.26
VPS29-209ENST00000551655 GSTTP1A0A1W2PQM5 241 aa16.68■□□□□ 0.26
VPS29-209ENST00000551655 ZBTB5O15062 677 aa16.68■□□□□ 0.26
VPS29-209ENST00000551655 NARSO43776 548 aaKnown RBP16.68■□□□□ 0.26
VPS29-209ENST00000551655 ATP9AO75110 1047 aa16.68■□□□□ 0.26
VPS29-209ENST00000551655 CLASP2O75122 1294 aaKnown RBP16.68■□□□□ 0.26
VPS29-209ENST00000551655 PDE4AP27815 886 aa16.68■□□□□ 0.26
VPS29-209ENST00000551655 MTHFRP42898 656 aa16.68■□□□□ 0.26
VPS29-209ENST00000551655 ST3GAL2Q16842 350 aa16.68■□□□□ 0.26
VPS29-209ENST00000551655 TMC7Q7Z402 723 aa16.68■□□□□ 0.26
VPS29-209ENST00000551655 ENAHQ8N8S7 591 aaPredicted RBP16.68■□□□□ 0.26
VPS29-209ENST00000551655 MTMR8Q96EF0 704 aa16.68■□□□□ 0.26
VPS29-209ENST00000551655 RTP3Q9BQQ7 232 aa16.68■□□□□ 0.26
VPS29-209ENST00000551655 CELF4Q9BZC1 486 aaKnown RBP16.68■□□□□ 0.26
VPS29-209ENST00000551655 FBXL21Q9UKT6 434 aa16.68■□□□□ 0.26
VPS29-209ENST00000551655 LZTS1Q9Y250 596 aa16.68■□□□□ 0.26
VPS29-209ENST00000551655 FANCMQ8IYD8 2048 aa16.68■□□□□ 0.26
VPS29-209ENST00000551655 FRMPD4Q14CM0 1322 aa16.68■□□□□ 0.26
VPS29-209ENST00000551655 GPR179Q6PRD1 2367 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms