RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 LHFPL2Q6ZUX7 228 aa5.69□□□□□ -1.5
SNRPF-202ENST00000549580 FAM124AQ86V42 546 aa5.69□□□□□ -1.5
SNRPF-202ENST00000549580 CCDC103Q8IW40 242 aa5.69□□□□□ -1.5
SNRPF-202ENST00000549580 NPEPPSL1A6NEC2 478 aa5.68□□□□□ -1.5
SNRPF-202ENST00000549580 PLS3P13797 630 aa5.68□□□□□ -1.5
SNRPF-202ENST00000549580 STAT5AP42229 794 aa5.68□□□□□ -1.5
SNRPF-202ENST00000549580 SPDYAQ5MJ70 313 aa5.68□□□□□ -1.5
SNRPF-202ENST00000549580 IQCEQ6IPM2 695 aa5.68□□□□□ -1.5
SNRPF-202ENST00000549580 LBX2Q6XYB7 198 aa5.68□□□□□ -1.5
SNRPF-202ENST00000549580 ETV3LQ6ZN32 361 aa5.68□□□□□ -1.5
SNRPF-202ENST00000549580 DDX53Q86TM3 631 aaKnown RBP5.68□□□□□ -1.5
SNRPF-202ENST00000549580 WDR66Q8TBY9 1149 aa5.68□□□□□ -1.5
SNRPF-202ENST00000549580 IGDCC4Q8TDY8 1250 aa5.68□□□□□ -1.5
SNRPF-202ENST00000549580 WNK4Q96J92 1243 aa5.68□□□□□ -1.5
SNRPF-202ENST00000549580 LCORQ96JN0 433 aaPredicted RBP5.68□□□□□ -1.5
SNRPF-202ENST00000549580 MMP19Q99542 508 aa5.68□□□□□ -1.5
SNRPF-202ENST00000549580 DEF6Q9H4E7 631 aa5.68□□□□□ -1.5
SNRPF-202ENST00000549580 SLC5A4Q9NY91 659 aa5.68□□□□□ -1.5
SNRPF-202ENST00000549580 CLEC1BQ9P126 229 aa5.68□□□□□ -1.5
SNRPF-202ENST00000549580 SAMD15Q9P1V8 674 aa5.68□□□□□ -1.5
SNRPF-202ENST00000549580 PCDHA8Q9Y5H6 950 aa5.68□□□□□ -1.5
SNRPF-202ENST00000549580 EID1Q9Y6B2 187 aa5.68□□□□□ -1.5
SNRPF-202ENST00000549580 CBX4O00257 560 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 NEMP1O14524 444 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 WNT9AO14904 365 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 SGSM2O43147 1006 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 ZEB2O60315 1214 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 MSCO60682 206 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 KATNA1O75449 491 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 ALDH1L1O75891 902 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 CKMP06732 381 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 SEPHS1P49903 392 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 HSP90AB2PQ58FF8 381 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 PIK3R6Q5UE93 754 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 MTDHQ86UE4 582 aaKnown RBP5.67□□□□□ -1.5
SNRPF-202ENST00000549580 FMNL3Q8IVF7 1028 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 RAVER1Q8IY67 606 aaKnown RBP5.67□□□□□ -1.5
SNRPF-202ENST00000549580 RCBTB1Q8NDN9 531 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 OR2W6PQ8NHA6 318 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 PCDH19Q8TAB3 1148 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 DIO2Q92813 273 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 CHFRQ96EP1 664 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 ASPSCR1Q9BZE9 553 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 IFT22Q9H7X7 185 aa5.67□□□□□ -1.5
SNRPF-202ENST00000549580 TRBV23OR9-2A0A075B6M9 112 aa5.66□□□□□ -1.5
SNRPF-202ENST00000549580 C7orf72A4D263 438 aa5.66□□□□□ -1.5
SNRPF-202ENST00000549580 GLRX3O76003 335 aaKnown RBP5.66□□□□□ -1.5
SNRPF-202ENST00000549580 F2P00734 622 aa5.66□□□□□ -1.5
SNRPF-202ENST00000549580 APPP05067 770 aa5.66□□□□□ -1.5
SNRPF-202ENST00000549580 LCP1P13796 627 aa5.66□□□□□ -1.5
SNRPF-202ENST00000549580 SCNN1BP51168 640 aa5.66□□□□□ -1.5
SNRPF-202ENST00000549580 EPHB1P54762 984 aa5.66□□□□□ -1.5
SNRPF-202ENST00000549580 DSG1Q02413 1049 aa5.66□□□□□ -1.5
SNRPF-202ENST00000549580 PAK1Q13153 545 aa5.66□□□□□ -1.5
SNRPF-202ENST00000549580 MBLAC2Q68D91 279 aa5.66□□□□□ -1.5
SNRPF-202ENST00000549580 SPATS2Q86XZ4 545 aaKnown RBP5.66□□□□□ -1.5
SNRPF-202ENST00000549580 USP7Q93009 1102 aa5.66□□□□□ -1.5
SNRPF-202ENST00000549580 MBD6Q96DN6 1003 aa5.66□□□□□ -1.5
SNRPF-202ENST00000549580 TTC1Q99614 292 aa5.66□□□□□ -1.5
SNRPF-202ENST00000549580 PUS7LQ9H0K6 701 aaKnown RBP5.66□□□□□ -1.5
SNRPF-202ENST00000549580 TRAF5O00463 557 aa5.65□□□□□ -1.5
SNRPF-202ENST00000549580 PAMP19021 973 aa5.65□□□□□ -1.5
SNRPF-202ENST00000549580 SELENOPP49908 381 aa5.65□□□□□ -1.5
SNRPF-202ENST00000549580 MECP2P51608 486 aaKnown RBP5.65□□□□□ -1.5
SNRPF-202ENST00000549580 MCL1Q07820 350 aa5.65□□□□□ -1.5
SNRPF-202ENST00000549580 MTMR1Q13613 665 aa5.65□□□□□ -1.5
SNRPF-202ENST00000549580 TTF1Q15361 905 aaPredicted RBP5.65□□□□□ -1.5
SNRPF-202ENST00000549580 NFE2Q16621 373 aaPredicted RBP5.65□□□□□ -1.5
SNRPF-202ENST00000549580 INF2Q27J81 1249 aa5.65□□□□□ -1.5
SNRPF-202ENST00000549580 KIZQ2M2Z5 673 aa5.65□□□□□ -1.5
SNRPF-202ENST00000549580 IGFL4Q6B9Z1 124 aa5.65□□□□□ -1.5
SNRPF-202ENST00000549580 CIR1Q86X95 450 aaPredicted RBP5.65□□□□□ -1.5
SNRPF-202ENST00000549580 TTLL6Q8N841 843 aa5.65□□□□□ -1.5
SNRPF-202ENST00000549580 IGSF22Q8N9C0 903 aa5.65□□□□□ -1.5
SNRPF-202ENST00000549580 PLEKHO2Q8TD55 490 aa5.65□□□□□ -1.5
SNRPF-202ENST00000549580 DPF3Q92784 378 aa5.65□□□□□ -1.5
SNRPF-202ENST00000549580 ZSWIM3Q96MP5 696 aa5.65□□□□□ -1.5
SNRPF-202ENST00000549580 CELF4Q9BZC1 486 aaKnown RBP5.65□□□□□ -1.5
SNRPF-202ENST00000549580 TRIM8Q9BZR9 551 aa5.65□□□□□ -1.5
SNRPF-202ENST00000549580 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.65□□□□□ -1.5
SNRPF-202ENST00000549580 MARCH2Q9P0N8 246 aa5.65□□□□□ -1.5
SNRPF-202ENST00000549580 APOBEC2Q9Y235 224 aaKnown RBP5.65□□□□□ -1.5
SNRPF-202ENST00000549580 WDR33Q9C0J8 1336 aaKnown RBP5.65□□□□□ -1.51
SNRPF-202ENST00000549580 NPHP3-ACAD11A0A0J9YXS1 232 aa5.64□□□□□ -1.51
SNRPF-202ENST00000549580 M0R2C6 588 aa5.64□□□□□ -1.51
SNRPF-202ENST00000549580 CYP1A1P04798 512 aaPredicted RBP5.64□□□□□ -1.51
SNRPF-202ENST00000549580 ID4P47928 161 aa5.64□□□□□ -1.51
SNRPF-202ENST00000549580 ADAM9Q13443 819 aa5.64□□□□□ -1.51
SNRPF-202ENST00000549580 SURF1Q15526 300 aa5.64□□□□□ -1.51
SNRPF-202ENST00000549580 TMEM177Q53S58 311 aa5.64□□□□□ -1.51
SNRPF-202ENST00000549580 PRAMEF18Q5VWM3 479 aa5.64□□□□□ -1.51
SNRPF-202ENST00000549580 MIB1Q86YT6 1006 aa5.64□□□□□ -1.51
SNRPF-202ENST00000549580 ZC3H7AQ8IWR0 971 aaKnown RBP5.64□□□□□ -1.51
SNRPF-202ENST00000549580 SMC1BQ8NDV3 1235 aa5.64□□□□□ -1.51
SNRPF-202ENST00000549580 ALG1Q9BT22 464 aa5.64□□□□□ -1.51
SNRPF-202ENST00000549580 CDIP1Q9H305 208 aa5.64□□□□□ -1.51
SNRPF-202ENST00000549580 BTG4Q9NY30 223 aa5.64□□□□□ -1.51
SNRPF-202ENST00000549580 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.64□□□□□ -1.51
SNRPF-202ENST00000549580 B4GALT6Q9UBX8 382 aa5.64□□□□□ -1.51
SNRPF-202ENST00000549580 TCEAL9Q9UHQ7 104 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms