RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 NOD1Q9Y239 953 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 ATP6V1DQ9Y5K8 247 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 CLIC4Q9Y696 253 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 ZNF862O60290 1169 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 INSRRP14616 1297 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 NASPP49321 788 aaPredicted RBP12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 ADAM17P78536 824 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 NUCB2P80303 420 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 PTPAQ15257 358 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 XKR3Q5GH77 459 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 ZNF484Q5JVG2 852 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 HAUS3Q68CZ6 603 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 C4orf19Q8IY42 314 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 USP28Q96RU2 1077 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 HSD17B14Q9BPX1 270 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 EIF2AK1Q9BQI3 630 aaKnown RBP12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 LXNQ9BS40 222 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 FTOQ9C0B1 505 aaKnown RBP eCLIP12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 ZSWIM4Q9H7M6 989 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 TUFT1Q9NNX1 390 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 TSHZ2Q9NRE2 1034 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 NRBP2Q9NSY0 501 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 TMEM39AQ9NV64 488 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 SETD4Q9NVD3 440 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 LRWD1Q9UFC0 647 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 TBX21Q9UL17 535 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 ZDHHC9Q9Y397 364 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 CEP290O15078 2479 aa12.76□□□□□ -0.37
CALCOCO1-208ENST00000547988 MBLAC1A4D2B0 266 aaPredicted RBP12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 VWA3AA6NCI4 1184 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 KIAA0355O15063 1070 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 SLITRK3O94933 977 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 LYPLA2O95372 231 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 MUTP22033 750 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 RPA1P27694 616 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 CYP4A11Q02928 519 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 PTK7Q13308 1070 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 HIC1Q14526 733 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 SLC39A14Q15043 492 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 IL17AQ16552 155 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 MICAL3Q7RTP6 2002 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 SERINC5Q86VE9 423 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 CCDC155Q8N6L0 562 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 CAGE1Q8TC20 777 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 DYDC2Q96IM9 177 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 AK8Q96MA6 479 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 CTAGE1Q96RT6 745 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 POLR3CQ9BUI4 534 aaPredicted RBP12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 NIFKQ9BYG3 293 aaKnown RBP12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 PRDM5Q9NQX1 630 aaPredicted RBP12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 RGL1Q9NZL6 768 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 SEPT9Q9UHD8 586 aaPredicted RBP12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 TUBE1Q9UJT0 475 aa12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 RBM19Q9Y4C8 960 aaKnown RBP12.75□□□□□ -0.37
CALCOCO1-208ENST00000547988 TET1Q8NFU7 2136 aa12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 ZBTB42B2RXF5 422 aa12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 PITPNM1O00562 1244 aa12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 TREHO43280 583 aa12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 STBD1O95210 358 aa12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 YEATS4O95619 227 aa12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 RPLP2P05387 115 aaKnown RBP12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 LONP1P36776 959 aaKnown RBP12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 CEBPZQ03701 1054 aaKnown RBP12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 RBL2Q08999 1139 aa12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 BFSP2Q13515 415 aa12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 CTTNQ14247 550 aaKnown RBP12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 STK38Q15208 465 aa12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 MARCH8Q5T0T0 291 aa12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 KRT79Q5XKE5 535 aa12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 TAF2Q6P1X5 1199 aa12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 TPH2Q8IWU9 490 aa12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 HIPK3Q9H422 1215 aa12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 WRAP73Q9P2S5 460 aaPredicted RBP12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 CFAP45Q9UL16 551 aa12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 CIZ1Q9ULV3 898 aaPredicted RBP12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 PPME1Q9Y570 386 aa12.74□□□□□ -0.37
CALCOCO1-208ENST00000547988 TRIM43BA6NCK2 446 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 SLC26A4O43511 780 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 CAND2O75155 1236 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 PPP6R2O75170 966 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 MED24O75448 989 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 TIMP1P01033 207 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 SPATA31C1P0DKV0 1188 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 CYP2C9P11712 490 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 XRCC6P12956 609 aaKnown RBP eCLIP12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 RAG1P15918 1043 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 YWHABP31946 246 aaKnown RBP12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 IGBP1P78318 339 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 ZNF200P98182 395 aaPredicted RBP12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 TARBP2Q15633 366 aaKnown RBP12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 MTHFD1LQ6UB35 978 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 ANO5Q75V66 913 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 OTUD6AQ7L8S5 288 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 TRMT1LQ7Z2T5 733 aaKnown RBP12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 SH3RF1Q7Z6J0 888 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 CATSPER3Q86XQ3 398 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 LINC00301Q8NCQ3 95 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 SNX29Q8TEQ0 813 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 TRAPPC12Q8WVT3 735 aa12.73□□□□□ -0.37
CALCOCO1-208ENST00000547988 TRIM43Q96BQ3 446 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms