RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 PDGFDQ9GZP0 370 aaPredicted RBP11.66□□□□□ -0.54
NPAS3-205ENST00000547068 NUCKS1Q9H1E3 243 aaKnown RBP11.66□□□□□ -0.54
NPAS3-205ENST00000547068 TMEM60Q9H2L4 133 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 MAGEF1Q9HAY2 307 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 AMACRQ9UHK6 382 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 ATP8A1Q9Y2Q0 1164 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 MYH1P12882 1939 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 PGRMC1O00264 195 aaKnown RBP11.66□□□□□ -0.54
NPAS3-205ENST00000547068 IGF2BP3O00425 579 aaKnown RBP eCLIP11.66□□□□□ -0.54
NPAS3-205ENST00000547068 KRIT1O00522 736 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 UBOX5O94941 541 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 FGFR1OPO95684 399 aaKnown RBP11.66□□□□□ -0.54
NPAS3-205ENST00000547068 RARAP10276 462 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 NEFHP12036 1026 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 VEGFAP15692 232 aaPredicted RBP11.66□□□□□ -0.54
NPAS3-205ENST00000547068 SSR1P43307 286 aaKnown RBP11.66□□□□□ -0.54
NPAS3-205ENST00000547068 NCALDP61601 193 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 CCDC152Q4G0S7 254 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 ANKRD20A2Q5SQ80 823 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 ANKRD20A1Q5TYW2 823 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 ANKRD20A3Q5VUR7 823 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 PRR5LQ6MZQ0 368 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 BLIDQ8IZY5 108 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 ATXN2LQ8WWM7 1075 aaKnown RBP11.66□□□□□ -0.54
NPAS3-205ENST00000547068 C7orf25Q9BPX7 421 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 FAM167BQ9BTA0 163 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 NSRP1Q9H0G5 558 aaKnown RBP11.66□□□□□ -0.54
NPAS3-205ENST00000547068 ECT2Q9H8V3 914 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 A0A087X0T9 212 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 A6NHS1 94 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 CCDC188H7C350 402 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 SMIM22K7EJ46 135 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 AHCYL1O43865 530 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 TLR2O60603 784 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 DDAH1O94760 285 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 FESP07332 822 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 FAM228BP0C875 321 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 ATP2A2P16615 1042 aaKnown RBP11.65□□□□□ -0.54
NPAS3-205ENST00000547068 CALML3P27482 149 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 TRAF1Q13077 416 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 RASGRF1Q13972 1273 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 PFKFB3Q16875 520 aaPredicted RBP11.65□□□□□ -0.54
NPAS3-205ENST00000547068 RASGRP4Q8TDF6 673 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 SDR42E1Q8WUS8 393 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 PRMT1Q99873 361 aaKnown RBP11.65□□□□□ -0.54
NPAS3-205ENST00000547068 DPH5Q9H2P9 285 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 INTS9Q9NV88 658 aaKnown RBP11.65□□□□□ -0.54
NPAS3-205ENST00000547068 CEP72Q9P209 647 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 ZFATQ9P243 1243 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 ADAMTS1Q9UHI8 967 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 GGT7Q9UJ14 662 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 UTP11Q9Y3A2 253 aaKnown RBP11.65□□□□□ -0.54
NPAS3-205ENST00000547068 NOC2LQ9Y3T9 749 aaKnown RBP11.65□□□□□ -0.54
NPAS3-205ENST00000547068 ATP6V0A2Q9Y487 856 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 COL24A1Q17RW2 1714 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 ABCB11O95342 1321 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 FAM205AQ6ZU69 1335 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 EVI5O60447 810 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 PRPHP41219 470 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 MMP13P45452 471 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 RAB27AP51159 221 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 USP11P51784 963 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 AMPD3Q01432 767 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 ARID5AQ03989 594 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 KCNMA1Q12791 1236 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 SEPT2Q15019 361 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 ENOX2Q16206 610 aaKnown RBP11.65□□□□□ -0.54
NPAS3-205ENST00000547068 FAM83BQ5T0W9 1011 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 SLC30A9Q6PML9 568 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 CABP7Q86V35 215 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 CCDC24Q8N4L8 307 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 SYN2Q92777 582 aaPredicted RBP11.65□□□□□ -0.54
NPAS3-205ENST00000547068 KLHL29Q96CT2 875 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.65□□□□□ -0.54
NPAS3-205ENST00000547068 FAM114A2Q9NRY5 505 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 TCP11L1Q9NUJ3 509 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 STK38LQ9Y2H1 464 aa11.65□□□□□ -0.54
NPAS3-205ENST00000547068 MYH3P11055 1940 aa11.65□□□□□ -0.55
NPAS3-205ENST00000547068 CCDC194A0A1B0GVG4 234 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 TLDC2A0PJX2 215 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 A8MUI8 341 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 STXBP3O00186 592 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 TTI1O43156 1089 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 ABL2P42684 1182 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 SNX1Q13596 522 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 PUM3Q15397 648 aaKnown RBP11.64□□□□□ -0.55
NPAS3-205ENST00000547068 PTPROQ16827 1216 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 COBLL1Q53SF7 1204 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 ARHGAP27Q6ZUM4 889 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 HELBQ8NG08 1087 aaPredicted RBP11.64□□□□□ -0.55
NPAS3-205ENST00000547068 MOV10L1Q9BXT6 1211 aaKnown RBP11.64□□□□□ -0.55
NPAS3-205ENST00000547068 OSBPL1AQ9BXW6 950 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 MTFR1LQ9H019 292 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 GOLPH3Q9H4A6 298 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 SLITRK6Q9H5Y7 841 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 MYH4Q9Y623 1939 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 PPFIA2O75334 1257 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 KRT16P08779 473 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 ITGA4P13612 1032 aa11.64□□□□□ -0.55
NPAS3-205ENST00000547068 ATP4AP20648 1035 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms