RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 CACNA1SQ13698 1873 aa12.27□□□□□ -0.44
CDH4-201ENST00000543233 GOLGA6L10A0A0M3HER8 536 aa12.27□□□□□ -0.44
CDH4-201ENST00000543233 ESYT3A0FGR9 886 aa12.27□□□□□ -0.44
CDH4-201ENST00000543233 CCT8L1PA6NM43 557 aa12.27□□□□□ -0.44
CDH4-201ENST00000543233 LSM1O15116 133 aaKnown RBP12.27□□□□□ -0.44
CDH4-201ENST00000543233 CYTH3O43739 400 aa12.27□□□□□ -0.44
CDH4-201ENST00000543233 SCNN1DP51172 638 aa12.27□□□□□ -0.44
CDH4-201ENST00000543233 DPYDQ12882 1025 aa12.27□□□□□ -0.44
CDH4-201ENST00000543233 PPP2R5BQ15173 497 aa12.27□□□□□ -0.44
CDH4-201ENST00000543233 DOK7Q18PE1 504 aa12.27□□□□□ -0.44
CDH4-201ENST00000543233 SLC35G1Q2M3R5 365 aa12.27□□□□□ -0.44
CDH4-201ENST00000543233 LETM2Q2VYF4 491 aa12.27□□□□□ -0.44
CDH4-201ENST00000543233 EMBQ6PCB8 327 aa12.27□□□□□ -0.44
CDH4-201ENST00000543233 GET4Q7L5D6 327 aaPredicted RBP12.27□□□□□ -0.44
CDH4-201ENST00000543233 EYA3Q99504 573 aa12.27□□□□□ -0.44
CDH4-201ENST00000543233 MOV10L1Q9BXT6 1211 aaKnown RBP12.27□□□□□ -0.44
CDH4-201ENST00000543233 VPS16Q9H269 839 aa12.27□□□□□ -0.44
CDH4-201ENST00000543233 GGA1Q9UJY5 639 aa12.27□□□□□ -0.44
CDH4-201ENST00000543233 GDAQ9Y2T3 454 aa12.27□□□□□ -0.44
CDH4-201ENST00000543233 SYNRGQ9UMZ2 1314 aa12.27□□□□□ -0.45
CDH4-201ENST00000543233 KLRF2D3W0D1 207 aa12.27□□□□□ -0.45
CDH4-201ENST00000543233 HNRNPRO43390 633 aaKnown RBP12.27□□□□□ -0.45
CDH4-201ENST00000543233 MFAP3LO75121 409 aa12.27□□□□□ -0.45
CDH4-201ENST00000543233 FLOT1O75955 427 aa12.27□□□□□ -0.45
CDH4-201ENST00000543233 SP100P23497 879 aaPredicted RBP12.27□□□□□ -0.45
CDH4-201ENST00000543233 GBP5Q96PP8 586 aa12.27□□□□□ -0.45
CDH4-201ENST00000543233 MTA3Q9BTC8 594 aa12.27□□□□□ -0.45
CDH4-201ENST00000543233 TRAIPQ9BWF2 469 aa12.27□□□□□ -0.45
CDH4-201ENST00000543233 TMEM60Q9H2L4 133 aa12.27□□□□□ -0.45
CDH4-201ENST00000543233 DACH1Q9UI36 760 aa12.27□□□□□ -0.45
CDH4-201ENST00000543233 PPIP5K2O43314 1243 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 NAPAP54920 295 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 INHBCP55103 352 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 ADCY1Q08828 1119 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 RIPK1Q13546 671 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 GPIHBP1Q8IV16 184 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 LRRC47Q8N1G4 583 aaKnown RBP12.26□□□□□ -0.45
CDH4-201ENST00000543233 STIM2Q9P246 746 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 POLLQ9UGP5 575 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 NFU1Q9UMS0 254 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 HMGB1P1B2RPK0 211 aaPredicted RBP12.26□□□□□ -0.45
CDH4-201ENST00000543233 IGF2BP3O00425 579 aaKnown RBP eCLIP12.26□□□□□ -0.45
CDH4-201ENST00000543233 RPL13P26373 211 aaKnown RBP12.26□□□□□ -0.45
CDH4-201ENST00000543233 RCAN1P53805 252 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 KANK3Q6NY19 840 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 CNGA4Q8IV77 575 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 ZNF579Q8NAF0 562 aaKnown RBP12.26□□□□□ -0.45
CDH4-201ENST00000543233 P3H4Q92791 437 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 BRD8Q9H0E9 1235 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 VCX3BQ9H321 246 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 VCX3AQ9NNX9 186 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 SMARCAL1Q9NZC9 954 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 MACROD2A1Z1Q3 448 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 DYTNA2CJ06 578 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 TMCC1O94876 653 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 FGRP09769 529 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 GHRP10912 638 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 NQO1P15559 274 aaKnown RBP12.26□□□□□ -0.45
CDH4-201ENST00000543233 RASA1P20936 1047 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 CDK8P49336 464 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 SARSP49591 514 aaKnown RBP12.26□□□□□ -0.45
CDH4-201ENST00000543233 ATP2C1P98194 919 aaPredicted RBP12.26□□□□□ -0.45
CDH4-201ENST00000543233 GUCY2DQ02846 1103 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 GLE1Q53GS7 698 aaKnown RBP12.26□□□□□ -0.45
CDH4-201ENST00000543233 PPP4R3AQ6IN85 833 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 C8orf74Q6P047 294 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 TNFRSF25Q93038 417 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 FERMT2Q96AC1 680 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 KLHL29Q96CT2 875 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 TRIM11Q96F44 468 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 MAD2L2Q9UI95 211 aa12.26□□□□□ -0.45
CDH4-201ENST00000543233 GPR75-ASB3A0A0A6YYF3 556 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 CFAP73A6NFT4 308 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 G3V3G9 751 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 TRAPPC3O43617 180 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 GYS1P13807 737 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 VCAM1P19320 739 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 FXR1P51114 621 aaKnown RBP eCLIP12.25□□□□□ -0.45
CDH4-201ENST00000543233 ITGB3BPQ13352 177 aaPredicted RBP12.25□□□□□ -0.45
CDH4-201ENST00000543233 DCAF8Q5TAQ9 597 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 ATP11CQ8NB49 1132 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 SLC17A8Q8NDX2 589 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 ENOX1Q8TC92 643 aaKnown RBP12.25□□□□□ -0.45
CDH4-201ENST00000543233 TAB2Q9NYJ8 693 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 ASB3Q9Y575 518 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 DOCK2Q92608 1830 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 DUOX1Q9NRD9 1551 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 TRIM49BA6NDI0 452 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 LDHCP07864 332 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 VIMP08670 466 aaKnown RBP12.25□□□□□ -0.45
CDH4-201ENST00000543233 GSTT1P30711 240 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 UBA7P41226 1012 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 RAD23BP54727 409 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 SESN3P58005 492 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 ERVK-24P63145 666 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 TMED1Q13445 227 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 IFI16Q16666 785 aaKnown RBP12.25□□□□□ -0.45
CDH4-201ENST00000543233 SBK1Q52WX2 424 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 TMTC1Q8IUR5 882 aa12.25□□□□□ -0.45
CDH4-201ENST00000543233 SLF2Q8IX21 1173 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms