RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	GBP6	Q6ZN66	633 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	NUCKS1	Q9H1E3	243 aa	Known RBP	13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	ROBO3	Q96MS0	1386 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	IKBKB	O14920	756 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	TUBB4B	P68371	445 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	ASIC2	Q16515	512 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	RGMB	Q6NW40	437 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	RRAGA	Q7L523	313 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	C7orf31	Q8N865	590 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	OR8K1	Q8NGG5	319 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	RPS6KC1	Q96S38	1066 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	NFIB	O00712	420 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	DLAT	P10515	647 aa	Known RBP	13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	FAM186B	Q8IYM0	893 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	SMARCAD1	Q9H4L7	1026 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	KCNH7	Q9NS40	1196 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	PRKAG2	Q9UGJ0	569 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	NRBP1	Q9UHY1	535 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	STRN	O43815	780 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	COBL	O75128	1261 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	ZSCAN20	P17040	1043 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	CUL4B	Q13620	913 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	MOB2	Q70IA6	237 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	MTR	Q99707	1265 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	RGL1	Q9NZL6	768 aa		13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCB8-222	ENST00000542328	EEF1G	P26641	437 aa	Known RBP	13.52	□□□□□ -0.24
ABCB8-222	ENST00000542328	KLHL30	Q0D2K2	578 aa		13.52	□□□□□ -0.24
ABCB8-222	ENST00000542328	SEMA3F	Q13275	785 aa		13.52	□□□□□ -0.24
ABCB8-222	ENST00000542328	PPP4R3CP	Q6ZMV5	832 aa		13.52	□□□□□ -0.24
ABCB8-222	ENST00000542328	CATSPERG	Q6ZRH7	1159 aa		13.52	□□□□□ -0.24
ABCB8-222	ENST00000542328	ENOX1	Q8TC92	643 aa	Known RBP	13.52	□□□□□ -0.24
ABCB8-222	ENST00000542328	ZNF384	Q8TF68	577 aa		13.52	□□□□□ -0.24
ABCB8-222	ENST00000542328	CNOT6L	Q96LI5	555 aa	Known RBP	13.52	□□□□□ -0.24
ABCB8-222	ENST00000542328	DESI2	Q9BSY9	194 aa		13.52	□□□□□ -0.24
ABCB8-222	ENST00000542328	PHKA2	P46019	1235 aa		13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	TAF12	Q16514	161 aa		13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	SLFN12L	Q6IEE8	588 aa		13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	RASGRP2	Q7LDG7	609 aa		13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	CATSPER4	Q7RTX7	472 aa		13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	RDM1	Q8NG50	284 aa		13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	NOX5	Q96PH1	765 aa		13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	TMEM60	Q9H2L4	133 aa		13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	GOLPH3L	Q9H4A5	285 aa		13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	RWDD2A	Q9UIY3	292 aa		13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	MARF1	Q9Y4F3	1742 aa	Known RBP	13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	PLCB3	Q01970	1234 aa		13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	EVX2	Q03828	476 aa		13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	LRRC63	Q05C16	580 aa		13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	SPOUT1	Q5T280	376 aa	Known RBP	13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	SFR1	Q86XK3	245 aa		13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	LRRC8A	Q8IWT6	810 aa		13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	IFT81	Q8WYA0	676 aa		13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	FAM193B	Q96PV7	902 aa	Predicted RBP	13.52	□□□□□ -0.25
ABCB8-222	ENST00000542328	MYPN	Q86TC9	1320 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	GOLGA6L7	A0A1B0GV03	622 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	SFI1	A8K8P3	1242 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	ATF7	P17544	494 aa	Predicted RBP	13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	KCTD17	Q8N5Z5	321 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	C6orf222	P0C671	652 aa	Predicted RBP	13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	CD19	P15391	556 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	RNASE9	P60153	205 aa	Known RBP	13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	MAPK6	Q16659	721 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	DNER	Q8NFT8	737 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	IL17RA	Q96F46	866 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	PDCD2L	Q9BRP1	358 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	SLC38A10	Q9HBR0	1119 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	FAM184B	Q9ULE4	1060 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	CLIC2	O15247	247 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	FXR2	P51116	673 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	VAV2	P52735	878 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	LAMC2	Q13753	1193 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	TYW1B	Q6NUM6	668 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	SECISBP2L	Q93073	1101 aa	Known RBP	13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	TUBGCP2	Q9BSJ2	902 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	LSM14B	Q9BX40	385 aa	Known RBP	13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	C2orf40	Q9H1Z8	148 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	RANBP17	Q9H2T7	1088 aa	Known RBP	13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	C1orf112	Q9NSG2	853 aa		13.51	□□□□□ -0.25
ABCB8-222	ENST00000542328	SPDYE5	A6NIY4	337 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	CYTH3	O43739	400 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	MAP2K1	Q02750	393 aa	Predicted RBP	13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	DEFB115	Q30KQ5	88 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	SH3BP5L	Q7L8J4	393 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	CCDC50	Q8IVM0	306 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	ABI1	Q8IZP0	508 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	GML	Q99445	158 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	TIPIN	Q9BVW5	301 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	APOL6	Q9BWW8	343 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	RASAL2	Q9UJF2	1139 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	COPB1	P53618	953 aa	Known RBP	13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	SNX16	P57768	344 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	CCDC51	Q96ER9	411 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	PSMB7	Q99436	277 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	KATNAL1	Q9BW62	490 aa		13.5	□□□□□ -0.25
ABCB8-222	ENST00000542328	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms