RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 RSPH10B2B2RC85 870 aa14.8□□□□□ -0.04
LTBR-208ENST00000541005 ZBTB42B2RXF5 422 aa14.8□□□□□ -0.04
LTBR-208ENST00000541005 HBP1O60381 514 aa14.8□□□□□ -0.04
LTBR-208ENST00000541005 BAIAP3O94812 1187 aa14.8□□□□□ -0.04
LTBR-208ENST00000541005 RSPH10BP0C881 870 aa14.8□□□□□ -0.04
LTBR-208ENST00000541005 ACTN1P12814 892 aa14.8□□□□□ -0.04
LTBR-208ENST00000541005 ATP4AP20648 1035 aa14.8□□□□□ -0.04
LTBR-208ENST00000541005 PPP2R5CQ13362 524 aa14.8□□□□□ -0.04
LTBR-208ENST00000541005 SAFBQ15424 915 aaKnown RBP eCLIP14.8□□□□□ -0.04
LTBR-208ENST00000541005 SWSAP1Q6NVH7 229 aa14.8□□□□□ -0.04
LTBR-208ENST00000541005 RUFY4Q6ZNE9 571 aa14.8□□□□□ -0.04
LTBR-208ENST00000541005 OTOP2Q7RTS6 562 aa14.8□□□□□ -0.04
LTBR-208ENST00000541005 BBXQ8WY36 941 aaPredicted RBP14.8□□□□□ -0.04
LTBR-208ENST00000541005 FAM167AQ96KS9 214 aa14.8□□□□□ -0.04
LTBR-208ENST00000541005 FOXP1Q9H334 677 aaPredicted RBP14.8□□□□□ -0.04
LTBR-208ENST00000541005 DISC1Q9NRI5 854 aa14.8□□□□□ -0.04
LTBR-208ENST00000541005 VAV3Q9UKW4 847 aa14.8□□□□□ -0.04
LTBR-208ENST00000541005 TMEM265A0A087WTH1 108 aa14.79□□□□□ -0.04
LTBR-208ENST00000541005 CCNT1O60563 726 aaKnown RBP14.79□□□□□ -0.04
LTBR-208ENST00000541005 FOSBP53539 338 aa14.79□□□□□ -0.04
LTBR-208ENST00000541005 CNKSR3Q6P9H4 555 aa14.79□□□□□ -0.04
LTBR-208ENST00000541005 FAM184AQ8NB25 1140 aa14.79□□□□□ -0.04
LTBR-208ENST00000541005 HAS1Q92839 578 aa14.79□□□□□ -0.04
LTBR-208ENST00000541005 GJA10Q969M2 543 aa14.79□□□□□ -0.04
LTBR-208ENST00000541005 GABBR1Q9UBS5 961 aa14.79□□□□□ -0.04
LTBR-208ENST00000541005 PCDHA2Q9Y5H9 948 aa14.79□□□□□ -0.04
LTBR-208ENST00000541005 MGAT3Q09327 533 aa14.78□□□□□ -0.04
LTBR-208ENST00000541005 MKRN4PQ13434 485 aaPredicted RBP14.78□□□□□ -0.04
LTBR-208ENST00000541005 ZNF484Q5JVG2 852 aa14.78□□□□□ -0.04
LTBR-208ENST00000541005 RSPH3Q86UC2 560 aa14.78□□□□□ -0.04
LTBR-208ENST00000541005 POTEDQ86YR6 584 aa14.78□□□□□ -0.04
LTBR-208ENST00000541005 SLFN12Q8IYM2 578 aa14.78□□□□□ -0.04
LTBR-208ENST00000541005 FTOQ9C0B1 505 aaKnown RBP eCLIP14.78□□□□□ -0.04
LTBR-208ENST00000541005 KIF3AQ9Y496 699 aa14.78□□□□□ -0.04
LTBR-208ENST00000541005 SAMM50Q9Y512 469 aa14.78□□□□□ -0.04
LTBR-208ENST00000541005 SLC4A7Q9Y6M7 1214 aa14.78□□□□□ -0.04
LTBR-208ENST00000541005 SMIM35A0A1B0GVV1 85 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 ABHD14A-ACY1A0A1B0GW23 586 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 CHMP2AO43633 222 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 ZNF862O60290 1169 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 EFCAB14O75071 495 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 CHRNA1P02708 482 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 OATP04181 439 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 IGBP1P78318 339 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 GUCY1B3Q02153 619 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 PRKCEQ02156 737 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 ORC2Q13416 577 aaPredicted RBP14.77□□□□□ -0.05
LTBR-208ENST00000541005 UGCGQ16739 394 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 PLEKHG4Q58EX7 1191 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 MTHFD1LQ6UB35 978 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 MIER3Q7Z3K6 550 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 PHOSPHO2Q8TCD6 241 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 TRAPPC12Q8WVT3 735 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 SLC9A7Q96T83 725 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 CEP131Q9UPN4 1083 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 NLRC5Q86WI3 1866 aa14.77□□□□□ -0.05
LTBR-208ENST00000541005 KDM3AQ9Y4C1 1321 aa14.76□□□□□ -0.05
LTBR-208ENST00000541005 WNT7AO00755 349 aa14.76□□□□□ -0.05
LTBR-208ENST00000541005 C22orf31O95567 290 aa14.76□□□□□ -0.05
LTBR-208ENST00000541005 CTSHP09668 335 aa14.76□□□□□ -0.05
LTBR-208ENST00000541005 DNAJB2P25686 324 aa14.76□□□□□ -0.05
LTBR-208ENST00000541005 U2AF2P26368 475 aaKnown RBP eCLIP14.76□□□□□ -0.05
LTBR-208ENST00000541005 MRPS6P82932 125 aaKnown RBP14.76□□□□□ -0.05
LTBR-208ENST00000541005 SPIRE1Q08AE8 756 aa14.76□□□□□ -0.05
LTBR-208ENST00000541005 RAB30Q15771 203 aa14.76□□□□□ -0.05
LTBR-208ENST00000541005 TCTN1Q2MV58 587 aa14.76□□□□□ -0.05
LTBR-208ENST00000541005 DNAJB3Q8WWF6 145 aa14.76□□□□□ -0.05
LTBR-208ENST00000541005 RALGAPA2Q2PPJ7 1873 aa14.76□□□□□ -0.05
LTBR-208ENST00000541005 COL4A6Q14031 1691 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 MYH15Q9Y2K3 1946 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 ZBBXA8MT70 800 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 GRXCR1A8MXD5 290 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 EML1O00423 815 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 NEMFO60524 1076 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 STBD1O95210 358 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 ATP2A2P16615 1042 aaKnown RBP14.75□□□□□ -0.05
LTBR-208ENST00000541005 KLRC1P26715 233 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 TRAPPC10P48553 1259 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 WDR5P61964 334 aaKnown RBP14.75□□□□□ -0.05
LTBR-208ENST00000541005 ZNF697Q5TEC3 545 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 NOSTRINQ8IVI9 506 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 CKAP2LQ8IYA6 745 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 NME8Q8N427 588 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 DEFB123Q8N688 67 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 ZBTB10Q96DT7 871 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 MTMR9Q96QG7 549 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 PBX4Q9BYU1 374 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 MTMR10Q9NXD2 777 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 SQORQ9Y6N5 450 aa14.75□□□□□ -0.05
LTBR-208ENST00000541005 KIF28PB7ZC32 967 aa14.74□□□□□ -0.05
LTBR-208ENST00000541005 MAGEB2O15479 319 aa14.74□□□□□ -0.05
LTBR-208ENST00000541005 BAG4O95429 457 aaKnown RBP14.74□□□□□ -0.05
LTBR-208ENST00000541005 PSMC5P62195 406 aa14.74□□□□□ -0.05
LTBR-208ENST00000541005 CUL4AQ13619 759 aa14.74□□□□□ -0.05
LTBR-208ENST00000541005 IKBKEQ14164 716 aa14.74□□□□□ -0.05
LTBR-208ENST00000541005 TARBP2Q15633 366 aaKnown RBP14.74□□□□□ -0.05
LTBR-208ENST00000541005 CALCRLQ16602 461 aa14.74□□□□□ -0.05
LTBR-208ENST00000541005 XKR3Q5GH77 459 aa14.74□□□□□ -0.05
LTBR-208ENST00000541005 IER5Q5VY09 327 aa14.74□□□□□ -0.05
LTBR-208ENST00000541005 LINC01465Q8N7H1 131 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms