RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 ATL3Q6DD88 541 aa16.74■□□□□ 0.27
MDM1-210ENST00000540418 ERMNQ8TAM6 284 aa16.74■□□□□ 0.27
MDM1-210ENST00000540418 ZSWIM4Q9H7M6 989 aa16.74■□□□□ 0.27
MDM1-210ENST00000540418 TFIP11Q9UBB9 837 aaKnown RBP16.74■□□□□ 0.27
MDM1-210ENST00000540418 STK24Q9Y6E0 443 aa16.74■□□□□ 0.27
MDM1-210ENST00000540418 XKR3Q5GH77 459 aa16.74■□□□□ 0.27
MDM1-210ENST00000540418 ZNF484Q5JVG2 852 aa16.74■□□□□ 0.27
MDM1-210ENST00000540418 TRMT1LQ7Z2T5 733 aaKnown RBP16.74■□□□□ 0.27
MDM1-210ENST00000540418 TPH2Q8IWU9 490 aa16.74■□□□□ 0.27
MDM1-210ENST00000540418 LMBR1Q8WVP7 490 aa16.74■□□□□ 0.27
MDM1-210ENST00000540418 PDLIM7Q9NR12 457 aa16.74■□□□□ 0.27
MDM1-210ENST00000540418 VWA3AA6NCI4 1184 aa16.73■□□□□ 0.27
MDM1-210ENST00000540418 STBD1O95210 358 aa16.73■□□□□ 0.27
MDM1-210ENST00000540418 NASPP49321 788 aaPredicted RBP16.73■□□□□ 0.27
MDM1-210ENST00000540418 CYP4A11Q02928 519 aa16.73■□□□□ 0.27
MDM1-210ENST00000540418 CTTNQ14247 550 aaKnown RBP16.73■□□□□ 0.27
MDM1-210ENST00000540418 SLC39A14Q15043 492 aa16.73■□□□□ 0.27
MDM1-210ENST00000540418 FOXD4L6Q3SYB3 417 aaPredicted RBP16.73■□□□□ 0.27
MDM1-210ENST00000540418 FOXD4L3Q6VB84 417 aaPredicted RBP16.73■□□□□ 0.27
MDM1-210ENST00000540418 C4orf19Q8IY42 314 aa16.73■□□□□ 0.27
MDM1-210ENST00000540418 CTAGE1Q96RT6 745 aa16.73■□□□□ 0.27
MDM1-210ENST00000540418 LXNQ9BS40 222 aa16.73■□□□□ 0.27
MDM1-210ENST00000540418 PRKAG2Q9UGJ0 569 aa16.73■□□□□ 0.27
MDM1-210ENST00000540418 MORC2Q9Y6X9 1032 aaPredicted RBP16.73■□□□□ 0.27
MDM1-210ENST00000540418 KIAA0355O15063 1070 aa16.73■□□□□ 0.27
MDM1-210ENST00000540418 TREHO43280 583 aa16.73■□□□□ 0.27
MDM1-210ENST00000540418 MARCH8Q5T0T0 291 aa16.73■□□□□ 0.27
MDM1-210ENST00000540418 SH3RF1Q7Z6J0 888 aa16.73■□□□□ 0.27
MDM1-210ENST00000540418 POLR3CQ9BUI4 534 aaPredicted RBP16.73■□□□□ 0.27
MDM1-210ENST00000540418 NIFKQ9BYG3 293 aaKnown RBP16.73■□□□□ 0.27
MDM1-210ENST00000540418 TUFT1Q9NNX1 390 aa16.73■□□□□ 0.27
MDM1-210ENST00000540418 PRDM5Q9NQX1 630 aaPredicted RBP16.73■□□□□ 0.27
MDM1-210ENST00000540418 WRAP73Q9P2S5 460 aaPredicted RBP16.73■□□□□ 0.27
MDM1-210ENST00000540418 TBX21Q9UL17 535 aa16.73■□□□□ 0.27
MDM1-210ENST00000540418 ATP6V1DQ9Y5K8 247 aa16.73■□□□□ 0.27
MDM1-210ENST00000540418 COL1A2P08123 1366 aa16.73■□□□□ 0.27
MDM1-210ENST00000540418 TRIM43BA6NCK2 446 aa16.72■□□□□ 0.27
MDM1-210ENST00000540418 DDX11L8A8MPP1 907 aa16.72■□□□□ 0.27
MDM1-210ENST00000540418 CYP2C9P11712 490 aa16.72■□□□□ 0.27
MDM1-210ENST00000540418 IGBP1P78318 339 aa16.72■□□□□ 0.27
MDM1-210ENST00000540418 PTK7Q13308 1070 aa16.72■□□□□ 0.27
MDM1-210ENST00000540418 CATSPER3Q86XQ3 398 aa16.72■□□□□ 0.27
MDM1-210ENST00000540418 TRIM43Q96BQ3 446 aaPredicted RBP16.72■□□□□ 0.27
MDM1-210ENST00000540418 CFAP45Q9UL16 551 aa16.72■□□□□ 0.27
MDM1-210ENST00000540418 LYPLA2O95372 231 aa16.72■□□□□ 0.27
MDM1-210ENST00000540418 SPATA31C1P0DKV0 1188 aa16.72■□□□□ 0.27
MDM1-210ENST00000540418 RPA1P27694 616 aa16.72■□□□□ 0.27
MDM1-210ENST00000540418 SERINC5Q86VE9 423 aa16.72■□□□□ 0.27
MDM1-210ENST00000540418 MBLAC1A4D2B0 266 aaPredicted RBP16.71■□□□□ 0.27
MDM1-210ENST00000540418 ZBTB42B2RXF5 422 aa16.71■□□□□ 0.27
MDM1-210ENST00000540418 MARCKSP29966 332 aaPredicted RBP16.71■□□□□ 0.27
MDM1-210ENST00000540418 HAUS3Q68CZ6 603 aa16.71■□□□□ 0.27
MDM1-210ENST00000540418 LINC00301Q8NCQ3 95 aa16.71■□□□□ 0.27
MDM1-210ENST00000540418 TRAPPC12Q8WVT3 735 aa16.71■□□□□ 0.27
MDM1-210ENST00000540418 AK8Q96MA6 479 aa16.71■□□□□ 0.27
MDM1-210ENST00000540418 TUBE1Q9UJT0 475 aa16.71■□□□□ 0.27
MDM1-210ENST00000540418 SRPRBQ9Y5M8 271 aaKnown RBP16.71■□□□□ 0.27
MDM1-210ENST00000540418 MED24O75448 989 aa16.71■□□□□ 0.27
MDM1-210ENST00000540418 YEATS4O95619 227 aa16.71■□□□□ 0.27
MDM1-210ENST00000540418 LONP1P36776 959 aaKnown RBP16.71■□□□□ 0.27
MDM1-210ENST00000540418 DNM1Q05193 864 aaKnown RBP16.71■□□□□ 0.27
MDM1-210ENST00000540418 STK38Q15208 465 aa16.71■□□□□ 0.27
MDM1-210ENST00000540418 KRT79Q5XKE5 535 aa16.71■□□□□ 0.27
MDM1-210ENST00000540418 ANO5Q75V66 913 aa16.71■□□□□ 0.27
MDM1-210ENST00000540418 OTUD6AQ7L8S5 288 aa16.71■□□□□ 0.27
MDM1-210ENST00000540418 SEPT9Q9UHD8 586 aaPredicted RBP16.71■□□□□ 0.27
MDM1-210ENST00000540418 ZMYND8Q9ULU4 1186 aaPredicted RBP16.71■□□□□ 0.27
MDM1-210ENST00000540418 ALPK3Q96L96 1907 aa16.71■□□□□ 0.26
MDM1-210ENST00000540418 SYN1P17600 705 aa16.7■□□□□ 0.26
MDM1-210ENST00000540418 MUTP22033 750 aa16.7■□□□□ 0.26
MDM1-210ENST00000540418 KLRC1P26715 233 aa16.7■□□□□ 0.26
MDM1-210ENST00000540418 YWHABP31946 246 aaKnown RBP16.7■□□□□ 0.26
MDM1-210ENST00000540418 CCT6AP40227 531 aaKnown RBP16.7■□□□□ 0.26
MDM1-210ENST00000540418 TARBP2Q15633 366 aaKnown RBP16.7■□□□□ 0.26
MDM1-210ENST00000540418 MTHFD1LQ6UB35 978 aa16.7■□□□□ 0.26
MDM1-210ENST00000540418 HIPK3Q9H422 1215 aa16.7■□□□□ 0.26
MDM1-210ENST00000540418 FBXO2Q9UK22 296 aaPredicted RBP16.7■□□□□ 0.26
MDM1-210ENST00000540418 CIZ1Q9ULV3 898 aaPredicted RBP16.7■□□□□ 0.26
MDM1-210ENST00000540418 PCDHA2Q9Y5H9 948 aa16.7■□□□□ 0.26
MDM1-210ENST00000540418 PP2D1A8MPX8 630 aa16.7■□□□□ 0.26
MDM1-210ENST00000540418 TIMP1P01033 207 aa16.7■□□□□ 0.26
MDM1-210ENST00000540418 XRCC6P12956 609 aaKnown RBP eCLIP16.7■□□□□ 0.26
MDM1-210ENST00000540418 RAG1P15918 1043 aa16.7■□□□□ 0.26
MDM1-210ENST00000540418 CDC25AP30304 524 aa16.7■□□□□ 0.26
MDM1-210ENST00000540418 CCDC155Q8N6L0 562 aa16.7■□□□□ 0.26
MDM1-210ENST00000540418 SNX29Q8TEQ0 813 aa16.7■□□□□ 0.26
MDM1-210ENST00000540418 NOC4LQ9BVI4 516 aaKnown RBP16.7■□□□□ 0.26
MDM1-210ENST00000540418 SPTLC2O15270 562 aa16.69■□□□□ 0.26
MDM1-210ENST00000540418 BFSP2Q13515 415 aa16.69■□□□□ 0.26
MDM1-210ENST00000540418 TAF2Q6P1X5 1199 aa16.69■□□□□ 0.26
MDM1-210ENST00000540418 CAGE1Q8TC20 777 aa16.69■□□□□ 0.26
MDM1-210ENST00000540418 DHX38Q92620 1227 aaKnown RBP16.69■□□□□ 0.26
MDM1-210ENST00000540418 TMEM150BA6NC51 233 aa16.69■□□□□ 0.26
MDM1-210ENST00000540418 ZBTB39O15060 712 aa16.69■□□□□ 0.26
MDM1-210ENST00000540418 MAGEB2O15479 319 aa16.69■□□□□ 0.26
MDM1-210ENST00000540418 PPP6R2O75170 966 aa16.69■□□□□ 0.26
MDM1-210ENST00000540418 GRIN1Q05586 938 aa16.69■□□□□ 0.26
MDM1-210ENST00000540418 MTERF2Q49AM1 385 aa16.69■□□□□ 0.26
MDM1-210ENST00000540418 KRI1Q8N9T8 703 aaKnown RBP16.69■□□□□ 0.26
MDM1-210ENST00000540418 NACC1Q96RE7 527 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms