RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 FAM160B1Q5W0V3 765 aa15.78■□□□□ 0.12
CD4-208ENST00000538827 SWSAP1Q6NVH7 229 aa15.78■□□□□ 0.12
CD4-208ENST00000538827 GPBP1Q86WP2 473 aa15.78■□□□□ 0.12
CD4-208ENST00000538827 CCDC60Q8IWA6 550 aaPredicted RBP15.78■□□□□ 0.12
CD4-208ENST00000538827 PIGOQ8TEQ8 1089 aa15.78■□□□□ 0.12
CD4-208ENST00000538827 ATP6V0A1Q93050 837 aa15.78■□□□□ 0.12
CD4-208ENST00000538827 SMARCE1Q969G3 411 aa15.78■□□□□ 0.12
CD4-208ENST00000538827 HSD17B14Q9BPX1 270 aa15.78■□□□□ 0.12
CD4-208ENST00000538827 ZSWIM4Q9H7M6 989 aa15.78■□□□□ 0.12
CD4-208ENST00000538827 ZNF302Q9NR11 478 aa15.78■□□□□ 0.12
CD4-208ENST00000538827 WRAP73Q9P2S5 460 aaPredicted RBP15.78■□□□□ 0.12
CD4-208ENST00000538827 ARHGEF35A5YM69 484 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 BIN1O00499 593 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 NKRFO15226 690 aaKnown RBP eCLIP15.77■□□□□ 0.12
CD4-208ENST00000538827 ADCY3O60266 1144 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 DKC1O60832 514 aaKnown RBP eCLIP15.77■□□□□ 0.12
CD4-208ENST00000538827 SMC2O95347 1197 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 KRT18P05783 430 aaKnown RBP15.77■□□□□ 0.12
CD4-208ENST00000538827 MUTP22033 750 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 CNGA1P29973 690 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 TCF7P36402 384 aaPredicted RBP15.77■□□□□ 0.12
CD4-208ENST00000538827 PSMC6P62333 389 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 ASIC1P78348 528 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 PRKCEQ02156 737 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 TRIM32Q13049 653 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 IRF5Q13568 498 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 LAMC2Q13753 1193 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 DUSP28Q4G0W2 176 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 IQSEC1Q6DN90 963 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 SASS6Q6UVJ0 657 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 ABHD15Q6UXT9 468 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 SH3RF1Q7Z6J0 888 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 TLK2Q86UE8 772 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 SEPT1Q8WYJ6 367 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 NACC1Q96RE7 527 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 GPR20Q99678 358 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 SEPT9Q9UHD8 586 aaPredicted RBP15.77■□□□□ 0.12
CD4-208ENST00000538827 FAM184BQ9ULE4 1060 aa15.77■□□□□ 0.12
CD4-208ENST00000538827 GSTTP1A0A1W2PQM5 241 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 ADCY6O43306 1168 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 EYA4O95677 639 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 HMGCRP04035 888 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 CYBAP13498 195 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 AKR1A1P14550 325 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 AMPD3Q01432 767 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 CUL4BQ13620 913 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 HSDL1Q3SXM5 330 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 PLA2G4FQ68DD2 849 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 RBM43Q6ZSC3 357 aaKnown RBP15.76■□□□□ 0.11
CD4-208ENST00000538827 TRIM50Q86XT4 487 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 TRPV1Q8NER1 839 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 SH3TC2Q8TF17 1288 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 AFG1LQ8WV93 481 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 MTRQ99707 1265 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 LRRC27Q9C0I9 530 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 BHMT2Q9H2M3 363 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 AZI2Q9H6S1 392 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 KBTBD4Q9NVX7 518 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 KIAA1468Q9P260 1216 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 MYH11P35749 1972 aa15.76■□□□□ 0.11
CD4-208ENST00000538827 TMEM150BA6NC51 233 aa15.75■□□□□ 0.11
CD4-208ENST00000538827 DYNC1LI2O43237 492 aaPredicted RBP15.75■□□□□ 0.11
CD4-208ENST00000538827 MYCP01106 439 aaPredicted RBP15.75■□□□□ 0.11
CD4-208ENST00000538827 PRKAR2AP13861 404 aaKnown RBP15.75■□□□□ 0.11
CD4-208ENST00000538827 MARK3P27448 753 aa15.75■□□□□ 0.11
CD4-208ENST00000538827 YWHABP31946 246 aaKnown RBP15.75■□□□□ 0.11
CD4-208ENST00000538827 DPYDQ12882 1025 aa15.75■□□□□ 0.11
CD4-208ENST00000538827 ISM2Q6H9L7 571 aa15.75■□□□□ 0.11
CD4-208ENST00000538827 DYMQ7RTS9 669 aa15.75■□□□□ 0.11
CD4-208ENST00000538827 C4orf19Q8IY42 314 aa15.75■□□□□ 0.11
CD4-208ENST00000538827 ELOA2Q8IYF1 753 aaPredicted RBP15.75■□□□□ 0.11
CD4-208ENST00000538827 GLG1Q92896 1179 aa15.75■□□□□ 0.11
CD4-208ENST00000538827 CCDC47Q96A33 483 aaKnown RBP15.75■□□□□ 0.11
CD4-208ENST00000538827 TSPY26PQ9H489 355 aa15.75■□□□□ 0.11
CD4-208ENST00000538827 NRBP1Q9UHY1 535 aa15.75■□□□□ 0.11
CD4-208ENST00000538827 PCDHA5Q9Y5H7 936 aa15.75■□□□□ 0.11
CD4-208ENST00000538827 FRMPD3Q5JV73 1810 aa15.75■□□□□ 0.11
CD4-208ENST00000538827 EMSYQ7Z589 1322 aa15.74■□□□□ 0.11
CD4-208ENST00000538827 MYMKA6NI61 221 aa15.74■□□□□ 0.11
CD4-208ENST00000538827 SOX1O00570 391 aaPredicted RBP15.74■□□□□ 0.11
CD4-208ENST00000538827 ZBTB39O15060 712 aa15.74■□□□□ 0.11
CD4-208ENST00000538827 USO1O60763 962 aaKnown RBP15.74■□□□□ 0.11
CD4-208ENST00000538827 ATG7O95352 703 aa15.74■□□□□ 0.11
CD4-208ENST00000538827 OATP04181 439 aa15.74■□□□□ 0.11
CD4-208ENST00000538827 ZNF286BP0CG31 522 aa15.74■□□□□ 0.11
CD4-208ENST00000538827 CCDC192P0DO97 292 aa15.74■□□□□ 0.11
CD4-208ENST00000538827 IDEP14735 1019 aa15.74■□□□□ 0.11
CD4-208ENST00000538827 STAT5BP51692 787 aa15.74■□□□□ 0.11
CD4-208ENST00000538827 SLC12A3P55017 1021 aa15.74■□□□□ 0.11
CD4-208ENST00000538827 ZNF445P59923 1031 aa15.74■□□□□ 0.11
CD4-208ENST00000538827 MDM2Q00987 491 aaPredicted RBP15.74■□□□□ 0.11
CD4-208ENST00000538827 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
CD4-208ENST00000538827 TYRO3Q06418 890 aa15.74■□□□□ 0.11
CD4-208ENST00000538827 CACNB2Q08289 660 aaPredicted RBP15.74■□□□□ 0.11
CD4-208ENST00000538827 RAD51AP2Q09MP3 1159 aa15.74■□□□□ 0.11
CD4-208ENST00000538827 STX1AQ16623 288 aa15.74■□□□□ 0.11
CD4-208ENST00000538827 XKR9Q5GH70 373 aa15.74■□□□□ 0.11
CD4-208ENST00000538827 LRSAM1Q6UWE0 723 aa15.74■□□□□ 0.11
CD4-208ENST00000538827 UBE2Q1Q7Z7E8 422 aa15.74■□□□□ 0.11
CD4-208ENST00000538827 KCTD17Q8N5Z5 321 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms