RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 NDUFA10O95299 355 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 TTLL1O95922 423 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 CHGBP05060 677 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 CACNB1Q02641 598 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-208ENST00000538570 ZMYM1Q5SVZ6 1142 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 OR6B2Q6IFH4 312 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 APOA5Q6Q788 366 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 VSTM4Q8IW00 320 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 NSUN7Q8NE18 718 aaKnown RBP10.68□□□□□ -0.7
COL4A6-208ENST00000538570 RNF217Q8TC41 542 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 ENOX1Q8TC92 643 aaKnown RBP10.68□□□□□ -0.7
COL4A6-208ENST00000538570 DHX38Q92620 1227 aaKnown RBP10.68□□□□□ -0.7
COL4A6-208ENST00000538570 F8W8V4 182 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 ATP6V1E1P36543 226 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 BBS9Q3SYG4 887 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 SLC44A4Q53GD3 710 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 GLE1Q53GS7 698 aaKnown RBP10.68□□□□□ -0.7
COL4A6-208ENST00000538570 TTC25Q96NG3 672 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 LRRC4Q9HBW1 653 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 DBNLQ9UJU6 430 aaKnown RBP10.68□□□□□ -0.7
COL4A6-208ENST00000538570 SEMA3EO15041 775 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 CA4P22748 312 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 NOP14P78316 857 aaKnown RBP10.68□□□□□ -0.7
COL4A6-208ENST00000538570 TFAMQ00059 246 aaKnown RBP10.68□□□□□ -0.7
COL4A6-208ENST00000538570 SLC7A5Q01650 507 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 PTPN21Q16825 1174 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 RASGRP4Q8TDF6 673 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 TBCKQ8TEA7 893 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 GINM1Q9NU53 330 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 TEKT2Q9UIF3 430 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 CAPN11Q9UMQ6 739 aa10.68□□□□□ -0.7
COL4A6-208ENST00000538570 ZNF189O75820 626 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-208ENST00000538570 MRPS15P82914 257 aaKnown RBP10.67□□□□□ -0.7
COL4A6-208ENST00000538570 DMPKQ09013 629 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 ARHGAP18Q8N392 663 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 SYT2Q8N9I0 419 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-208ENST00000538570 CYTH2Q99418 400 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 AP1M1Q9BXS5 423 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 OSBPL1AQ9BXW6 950 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 PTPRTO14522 1441 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 ATP10DQ9P241 1426 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 MMP1P03956 469 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 TAC1P20366 129 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 CCND2P30279 289 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 UBXN2AP68543 259 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 GRAMD1CQ8IYS0 662 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 PLXNC1O60486 1568 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 CIAO1O76071 339 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 ZBED1O96006 694 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 KRT14P02533 472 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 NPR1P16066 1061 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 MYO1EQ12965 1108 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 KCTD2Q14681 263 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 KIF19Q2TAC6 998 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 CDC26Q8NHZ8 85 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 DIS3Q9Y2L1 958 aaKnown RBP10.67□□□□□ -0.7
COL4A6-208ENST00000538570 M0R2C6 588 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 HSPA4LO95757 839 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 MCF2P10911 925 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 PMLP29590 882 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 LLGL1Q15334 1064 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 ADCK5Q3MIX3 580 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 TBC1D10BQ4KMP7 808 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-208ENST00000538570 PDIK1LQ8N165 341 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 CEP170P1Q96L14 293 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 EMILIN3Q9NT22 766 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 MORC2Q9Y6X9 1032 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-208ENST00000538570 H3BRJ5 948 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 CAND2O75155 1236 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 ELF1P32519 619 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 KIF23Q02241 960 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-208ENST00000538570 TRIM59Q8IWR1 403 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 SIX6OS1Q8N1H7 587 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 C7orf31Q8N865 590 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 ZBTB18Q99592 522 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 NXF1Q9UBU9 619 aaKnown RBP10.67□□□□□ -0.7
COL4A6-208ENST00000538570 H0Y3Z8 333 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 DNAJC6O75061 913 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 CCNE1P24864 410 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 SPARCL1Q14515 664 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 TAF1BQ53T94 588 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-208ENST00000538570 NUGGCQ68CJ6 796 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 TTLL7Q6ZT98 887 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 KCTD1Q719H9 257 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 BZW1Q7L1Q6 419 aaKnown RBP10.67□□□□□ -0.7
COL4A6-208ENST00000538570 DCPSQ96C86 337 aaKnown RBP10.67□□□□□ -0.7
COL4A6-208ENST00000538570 SAMSN1Q9NSI8 373 aaKnown RBP10.67□□□□□ -0.7
COL4A6-208ENST00000538570 STAP2Q9UGK3 403 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 ZNF804BA4D1E1 1349 aa10.67□□□□□ -0.7
COL4A6-208ENST00000538570 PBRM1Q86U86 1689 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 KCNA4P22459 653 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 PPARGP37231 505 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-208ENST00000538570 PHKA1P46020 1223 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 MXI1P50539 228 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 OCA2Q04671 838 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 SURF1Q15526 300 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 EMBQ6PCB8 327 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 LINC00301Q8NCQ3 95 aa10.66□□□□□ -0.7
COL4A6-208ENST00000538570 DDX28Q9NUL7 540 aaKnown RBP10.66□□□□□ -0.7
COL4A6-208ENST00000538570 ERBB4Q15303 1308 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms