RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 CUEDC2Q9H467 287 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 CLSTN2Q9H4D0 955 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 SMARCAD1Q9H4L7 1026 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 AZI2Q9H6S1 392 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 STK17AQ9UEE5 414 aa12.87□□□□□ -0.35
CDCA3-206ENST00000536241 TMEM150BA6NC51 233 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 CTAGE5O15320 804 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 DKC1O60832 514 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDCA3-206ENST00000536241 EYA4O95677 639 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 MYCP01106 439 aaPredicted RBP12.86□□□□□ -0.35
CDCA3-206ENST00000536241 LGALS2P05162 132 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 SSBP05455 408 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDCA3-206ENST00000536241 C6orf222P0C671 652 aaPredicted RBP12.86□□□□□ -0.35
CDCA3-206ENST00000536241 PLA2G4BP0C869 781 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 XRCC6P12956 609 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDCA3-206ENST00000536241 CASP1P29466 404 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 YWHABP31946 246 aaKnown RBP12.86□□□□□ -0.35
CDCA3-206ENST00000536241 GJA9P57773 515 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 DGKDQ16760 1214 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 SLC9C1Q4G0N8 1177 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 KANK3Q6NY19 840 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 PLPPR4Q7Z2D5 763 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 SH3RF1Q7Z6J0 888 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 TRIM50Q86XT4 487 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 SYT2Q8N9I0 419 aaPredicted RBP12.86□□□□□ -0.35
CDCA3-206ENST00000536241 AFAP1L1Q8TED9 768 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 C16orf70Q9BSU1 422 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 BHMT2Q9H2M3 363 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 TNMDQ9H2S6 317 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 KBTBD4Q9NVX7 518 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 DDX20Q9UHI6 824 aaKnown RBP12.86□□□□□ -0.35
CDCA3-206ENST00000536241 WDR81Q562E7 1941 aa12.86□□□□□ -0.35
CDCA3-206ENST00000536241 MYH9P35579 1960 aaKnown RBP12.86□□□□□ -0.35
CDCA3-206ENST00000536241 MYADML2A6NDP7 307 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 MARK3P27448 753 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 SLC12A3P55017 1021 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 PNOCQ13519 176 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 MTFR1Q15390 333 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 FSCN1Q16658 493 aaKnown RBP12.85□□□□□ -0.35
CDCA3-206ENST00000536241 XKR3Q5GH77 459 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 GNASQ5JWF2 1037 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 CCDC183Q5T5S1 534 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 FBXO46Q6PJ61 603 aaPredicted RBP12.85□□□□□ -0.35
CDCA3-206ENST00000536241 ANO5Q75V66 913 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 OTUD6AQ7L8S5 288 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 ELOA2Q8IYF1 753 aaPredicted RBP12.85□□□□□ -0.35
CDCA3-206ENST00000536241 SYAP1Q96A49 352 aaPredicted RBP12.85□□□□□ -0.35
CDCA3-206ENST00000536241 GZF1Q9H116 711 aaPredicted RBP12.85□□□□□ -0.35
CDCA3-206ENST00000536241 UNC93B1Q9H1C4 597 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 BLZF1Q9H2G9 400 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 RNPEPQ9H4A4 650 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 SPC25Q9HBM1 224 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 XPNPEP3Q9NQH7 507 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 NRBP2Q9NSY0 501 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 IGSF9BQ9UPX0 1349 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 H3BRB1 525 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 MYCNP04198 464 aaPredicted RBP12.85□□□□□ -0.35
CDCA3-206ENST00000536241 MYL3P08590 195 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 PRR29P0C7W0 189 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 ZNF286BP0CG31 522 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 HOXD8P13378 290 aaPredicted RBP12.85□□□□□ -0.35
CDCA3-206ENST00000536241 CPT1AP50416 773 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 NPEPPSP55786 919 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 AMPD3Q01432 767 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 PRKCEQ02156 737 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 POSTNQ15063 836 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 PLCB4Q15147 1175 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 BRDTQ58F21 947 aaPredicted RBP12.85□□□□□ -0.35
CDCA3-206ENST00000536241 XKR9Q5GH70 373 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 PLA2G4FQ68DD2 849 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 LHX8Q68G74 356 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 CCDC34Q96HJ3 373 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 UPF3AQ9H1J1 476 aaKnown RBP12.85□□□□□ -0.35
CDCA3-206ENST00000536241 TUT1Q9H6E5 874 aaKnown RBP12.85□□□□□ -0.35
CDCA3-206ENST00000536241 POLD4Q9HCU8 107 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 ANKEF1Q9NU02 776 aa12.85□□□□□ -0.35
CDCA3-206ENST00000536241 DBR1Q9UK59 544 aaKnown RBP12.85□□□□□ -0.35
CDCA3-206ENST00000536241 EMSYQ7Z589 1322 aa12.84□□□□□ -0.35
CDCA3-206ENST00000536241 SYNRGQ9UMZ2 1314 aa12.84□□□□□ -0.35
CDCA3-206ENST00000536241 MYMKA6NI61 221 aa12.84□□□□□ -0.35
CDCA3-206ENST00000536241 ADAMTS4O75173 837 aa12.84□□□□□ -0.35
CDCA3-206ENST00000536241 OATP04181 439 aa12.84□□□□□ -0.35
CDCA3-206ENST00000536241 CYP11B2P19099 503 aa12.84□□□□□ -0.35
CDCA3-206ENST00000536241 RARRES1P49788 294 aa12.84□□□□□ -0.35
CDCA3-206ENST00000536241 NKX3-2P78367 333 aa12.84□□□□□ -0.35
CDCA3-206ENST00000536241 CUL4BQ13620 913 aa12.84□□□□□ -0.35
CDCA3-206ENST00000536241 PKN2Q16513 984 aaKnown RBP12.84□□□□□ -0.35
CDCA3-206ENST00000536241 ARSHQ5FYA8 562 aa12.84□□□□□ -0.35
CDCA3-206ENST00000536241 RINT1Q6NUQ1 792 aa12.84□□□□□ -0.35
CDCA3-206ENST00000536241 DYMQ7RTS9 669 aa12.84□□□□□ -0.35
CDCA3-206ENST00000536241 GPBP1Q86WP2 473 aa12.84□□□□□ -0.35
CDCA3-206ENST00000536241 DDX12PQ92771 950 aa12.84□□□□□ -0.35
CDCA3-206ENST00000536241 CEP170P1Q96L14 293 aa12.84□□□□□ -0.35
CDCA3-206ENST00000536241 NIFKQ9BYG3 293 aaKnown RBP12.84□□□□□ -0.35
CDCA3-206ENST00000536241 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.84□□□□□ -0.35
CDCA3-206ENST00000536241 MAGEF1Q9HAY2 307 aa12.84□□□□□ -0.35
CDCA3-206ENST00000536241 ERAP1Q9NZ08 941 aa12.84□□□□□ -0.35
CDCA3-206ENST00000536241 SEPT9Q9UHD8 586 aaPredicted RBP12.84□□□□□ -0.35
CDCA3-206ENST00000536241 HOOK1Q9UJC3 728 aaKnown RBP12.84□□□□□ -0.35
CDCA3-206ENST00000536241 PCDHA5Q9Y5H7 936 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms