RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 YDJCA8MPS7 323 aa15.27■□□□□ 0.04
LIG1-203ENST00000536218 SNHG28P0DPA3 235 aa15.27■□□□□ 0.04
LIG1-203ENST00000536218 NEFHP12036 1026 aa15.27■□□□□ 0.04
LIG1-203ENST00000536218 TAL1P17542 331 aaPredicted RBP15.27■□□□□ 0.04
LIG1-203ENST00000536218 SMARCA1P28370 1054 aa15.27■□□□□ 0.04
LIG1-203ENST00000536218 PAK1Q13153 545 aa15.27■□□□□ 0.04
LIG1-203ENST00000536218 PDCD2Q16342 344 aaPredicted RBP15.27■□□□□ 0.04
LIG1-203ENST00000536218 CALCRLQ16602 461 aa15.27■□□□□ 0.04
LIG1-203ENST00000536218 DEFB132Q7Z7B7 95 aa15.27■□□□□ 0.04
LIG1-203ENST00000536218 CCDC63Q8NA47 563 aa15.27■□□□□ 0.04
LIG1-203ENST00000536218 ZNF570Q96NI8 536 aa15.27■□□□□ 0.04
LIG1-203ENST00000536218 GGA2Q9UJY4 613 aa15.27■□□□□ 0.04
LIG1-203ENST00000536218 LTBP1Q14766 1721 aa15.27■□□□□ 0.03
LIG1-203ENST00000536218 POTEMA6NI47 508 aa15.27■□□□□ 0.03
LIG1-203ENST00000536218 PHF20L1A8MW92 1017 aa15.27■□□□□ 0.03
LIG1-203ENST00000536218 TBC1D25Q3MII6 688 aa15.27■□□□□ 0.03
LIG1-203ENST00000536218 ZNF658Q5TYW1 1059 aaPredicted RBP15.27■□□□□ 0.03
LIG1-203ENST00000536218 SPICE1Q8N0Z3 855 aa15.27■□□□□ 0.03
LIG1-203ENST00000536218 MMGT1Q8N4V1 131 aa15.27■□□□□ 0.03
LIG1-203ENST00000536218 PIK3R5Q8WYR1 880 aa15.27■□□□□ 0.03
LIG1-203ENST00000536218 HPS3Q969F9 1004 aa15.27■□□□□ 0.03
LIG1-203ENST00000536218 LUC7L2Q9Y383 392 aaKnown RBP15.27■□□□□ 0.03
LIG1-203ENST00000536218 SLX4Q8IY92 1834 aa15.27■□□□□ 0.03
LIG1-203ENST00000536218 TTC26A0AVF1 554 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 SMIM24O75264 130 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 KRT83P78385 493 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 MAEAQ7L5Y9 396 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 CREG2Q8IUH2 290 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 CCDC17Q96LX7 622 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 CCSER1Q9C0I3 900 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 PSTPIP2Q9H939 334 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 GUCY2DQ02846 1103 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 GPIHBP1Q8IV16 184 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 DHX36Q9H2U1 1008 aaKnown RBP15.26■□□□□ 0.03
LIG1-203ENST00000536218 EBF2Q9HAK2 575 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 EPB41L5Q9HCM4 733 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 ZNF277Q9NRM2 450 aaPredicted RBP15.26■□□□□ 0.03
LIG1-203ENST00000536218 RMND1Q9NWS8 449 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 LRWD1Q9UFC0 647 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 SCAF8Q9UPN6 1271 aaKnown RBP15.26■□□□□ 0.03
LIG1-203ENST00000536218 LRRC37AA6NMS7 1700 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 COL11A2P13942 1736 aaPredicted RBP15.26■□□□□ 0.03
LIG1-203ENST00000536218 PLIN4Q96Q06 1357 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 LAD1O00515 517 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 ZBTB5O15062 677 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 COPB1P53618 953 aaKnown RBP15.26■□□□□ 0.03
LIG1-203ENST00000536218 ASIC1P78348 528 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 ITGB3BPQ13352 177 aaPredicted RBP15.26■□□□□ 0.03
LIG1-203ENST00000536218 LAMB3Q13751 1172 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 GPATCH4Q5T3I0 446 aaKnown RBP15.26■□□□□ 0.03
LIG1-203ENST00000536218 GKAP1Q5VSY0 366 aaPredicted RBP15.26■□□□□ 0.03
LIG1-203ENST00000536218 CDKAL1Q5VV42 579 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 HAUS3Q68CZ6 603 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 NFRKBQ6P4R8 1299 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 TRIM74Q86UV6 250 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 TRIM73Q86UV7 250 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 IQCKQ8N0W5 287 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 CSRNP1Q96S65 589 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 TSC22D3Q99576 134 aa15.26■□□□□ 0.03
LIG1-203ENST00000536218 GH2P01242 217 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 GNAT1P11488 350 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 FECHP22830 423 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 JAG1P78504 1218 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 ABCB5Q2M3G0 1257 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 QRICH1Q2TAL8 776 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 USH1GQ495M9 461 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 C7orf43Q8WVR3 580 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 KANSL2Q9H9L4 492 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 PAPOLBQ9NRJ5 636 aaKnown RBP15.25■□□□□ 0.03
LIG1-203ENST00000536218 NOP53Q9NZM5 478 aaKnown RBP15.25■□□□□ 0.03
LIG1-203ENST00000536218 PCDHA1Q9Y5I3 950 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 PAPOLAP51003 745 aaKnown RBP15.25■□□□□ 0.03
LIG1-203ENST00000536218 PMS1P54277 932 aaKnown RBP15.25■□□□□ 0.03
LIG1-203ENST00000536218 USP4Q13107 963 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 TRIM68Q6AZZ1 485 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 DYMQ7RTS9 669 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 ARFGAP2Q8N6H7 521 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 OR2W6PQ8NHA6 318 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 AGAP11Q8TF27 550 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 CDK5RAP3Q96JB5 506 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 PLAAQ9Y263 795 aa15.25■□□□□ 0.03
LIG1-203ENST00000536218 PAFAH1B1P43034 410 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 PDE4DQ08499 809 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 KIF5AQ12840 1032 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 LARGE2Q8N3Y3 721 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 CAVIN3Q969G5 261 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 CALML4Q96GE6 196 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 CORO1CQ9ULV4 474 aaPredicted RBP15.24■□□□□ 0.03
LIG1-203ENST00000536218 SNX12Q9UMY4 172 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 ITIH6Q6UXX5 1313 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 ESYT2A0FGR8 921 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 HMGB1P1B2RPK0 211 aaPredicted RBP15.24■□□□□ 0.03
LIG1-203ENST00000536218 F5H6K3 240 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 EDIL3O43854 480 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 KLRC3Q07444 240 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 SLC5A9Q2M3M2 681 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 FAM133BQ5BKY9 247 aaKnown RBP15.24■□□□□ 0.03
LIG1-203ENST00000536218 PPP4R3AQ6IN85 833 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 SIAH1Q8IUQ4 282 aa15.24■□□□□ 0.03
LIG1-203ENST00000536218 IFT20Q8IY31 132 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms